Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570708
Identifier: 190570708
GI number: 190570708
Start: 264507
End: 265358
Strand: Reverse
Name: 190570708
Synonym: WPa_0260
Alternate gene names: NA
Gene position: 265358-264507 (Counterclockwise)
Preceding gene: 190570709
Following gene: 190570707
Centisome position: 17.9
GC content: 35.8
Gene sequence:
>852_bases ATGACTGATACTTTAACTTTAAAAGAGGGAGATATTGAAACTACTGCTTTTGATAATAGCAATTTTACTAGAGTATTACA CGATGGAGAATGGTGGTACGTAATAACAGAAGTAATAGCTTTTCTGACAGGTAGTAAGAACCCATCTGACTATCTAAAAA AGATAAAAAGCAGAGATATAGGGCTTTCTGAAGGATGGGGACAATTTGTCACCCCCCTTGAAATTAAAACAAAAGGTGGT AAACAGAATGTTAATTGTACAAATGTTGAGGGGTTGTTTCGTATTTTGCAGTCTATTCCTTCCAAAAGAGTTGAACAATT TAAACGTTGGCTTGCAAAAGTCGGGTATGAAAGGCTACAAGAATATGAAAATCCTGAGCTTGCACTCAAACGAATCTATG CCGATTATGCTGCAAAAGGGTACCCTCAGGAATGGATACAAAAGAGAATAGAATCGATAGCTGTCAGAAATCAACTAACA AAAGAATGGGGTAACAGAAATATATCTGACCACAATAATAAGTATATTGAAGGTAGGGAATACGCAATATTGACAGACGT AATTTCTGAGGGAACGTTTGGAGTAAAAACAAAGCATCATAAGGAAATAAAAGGCTTGAGGAAACAACCACTAAGAGACC ATATGACACCAATTGAATTAATTTTTAACATGCTAGGAGAACAGGCTACCATTGATGAAATAAAAGATAAAGATGCACAG GGCTATAATAAAAATTTAGAAGCGGCAAAGGAAGGAGGTAAGAACGCAGGCACAGCAAGAGAGGCATTTGAAAAAGCTAG AGGTGTGAAAGTCGTTTCTTCAGATAACTTTTTAAAGAGGATTAAAGATTAA
Upstream 100 bases:
>100_bases TGATTTTGGAAAATTATTAAATTGTAAGTAATGGTTTTTCTGACTTTAAAATAGTGTCTTTTTAGTTTTTATGTTTATTC TTAACTTATAGAGGTTGCTT
Downstream 100 bases:
>100_bases AGTTCTCACTATAAGAAATCTCTGAATTTTATGTTTTAAAATGTTTTAGAAGGTTATTATAGCGTTATCTCTGATTTAGA TAGTTTGTTTTGTATGCTTT
Product: Putative phage related protein
Products: NA
Alternate protein names: Phage Related Protein; DNA-Damage-Inducible Protein D
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MTDTLTLKEGDIETTAFDNSNFTRVLHDGEWWYVITEVIAFLTGSKNPSDYLKKIKSRDIGLSEGWGQFVTPLEIKTKGG KQNVNCTNVEGLFRILQSIPSKRVEQFKRWLAKVGYERLQEYENPELALKRIYADYAAKGYPQEWIQKRIESIAVRNQLT KEWGNRNISDHNNKYIEGREYAILTDVISEGTFGVKTKHHKEIKGLRKQPLRDHMTPIELIFNMLGEQATIDEIKDKDAQ GYNKNLEAAKEGGKNAGTAREAFEKARGVKVVSSDNFLKRIKD
Sequences:
>Translated_283_residues MTDTLTLKEGDIETTAFDNSNFTRVLHDGEWWYVITEVIAFLTGSKNPSDYLKKIKSRDIGLSEGWGQFVTPLEIKTKGG KQNVNCTNVEGLFRILQSIPSKRVEQFKRWLAKVGYERLQEYENPELALKRIYADYAAKGYPQEWIQKRIESIAVRNQLT KEWGNRNISDHNNKYIEGREYAILTDVISEGTFGVKTKHHKEIKGLRKQPLRDHMTPIELIFNMLGEQATIDEIKDKDAQ GYNKNLEAAKEGGKNAGTAREAFEKARGVKVVSSDNFLKRIKD >Mature_282_residues TDTLTLKEGDIETTAFDNSNFTRVLHDGEWWYVITEVIAFLTGSKNPSDYLKKIKSRDIGLSEGWGQFVTPLEIKTKGGK QNVNCTNVEGLFRILQSIPSKRVEQFKRWLAKVGYERLQEYENPELALKRIYADYAAKGYPQEWIQKRIESIAVRNQLTK EWGNRNISDHNNKYIEGREYAILTDVISEGTFGVKTKHHKEIKGLRKQPLRDHMTPIELIFNMLGEQATIDEIKDKDAQG YNKNLEAAKEGGKNAGTAREAFEKARGVKVVSSDNFLKRIKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32460; Mature: 32329
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTLTLKEGDIETTAFDNSNFTRVLHDGEWWYVITEVIAFLTGSKNPSDYLKKIKSRDI CCCCEEECCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC GLSEGWGQFVTPLEIKTKGGKQNVNCTNVEGLFRILQSIPSKRVEQFKRWLAKVGYERLQ CCCCCCCHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYENPELALKRIYADYAAKGYPQEWIQKRIESIAVRNQLTKEWGNRNISDHNNKYIEGRE HCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCC YAILTDVISEGTFGVKTKHHKEIKGLRKQPLRDHMTPIELIFNMLGEQATIDEIKDKDAQ HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHCCCCHHHHHHCCCCC GYNKNLEAAKEGGKNAGTAREAFEKARGVKVVSSDNFLKRIKD CCCCCHHHHHCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHCC >Mature Secondary Structure TDTLTLKEGDIETTAFDNSNFTRVLHDGEWWYVITEVIAFLTGSKNPSDYLKKIKSRDI CCCEEECCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC GLSEGWGQFVTPLEIKTKGGKQNVNCTNVEGLFRILQSIPSKRVEQFKRWLAKVGYERLQ CCCCCCCHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYENPELALKRIYADYAAKGYPQEWIQKRIESIAVRNQLTKEWGNRNISDHNNKYIEGRE HCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCC YAILTDVISEGTFGVKTKHHKEIKGLRKQPLRDHMTPIELIFNMLGEQATIDEIKDKDAQ HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHCCCCHHHHHHCCCCC GYNKNLEAAKEGGKNAGTAREAFEKARGVKVVSSDNFLKRIKD CCCCCHHHHHCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA