Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is tolB [H]
Identifier: 190570675
GI number: 190570675
Start: 235266
End: 236522
Strand: Direct
Name: tolB [H]
Synonym: WPa_0225
Alternate gene names: 190570675
Gene position: 235266-236522 (Clockwise)
Preceding gene: 190570674
Following gene: 190570678
Centisome position: 15.87
GC content: 32.06
Gene sequence:
>1257_bases ATGAAGCTATTCGTTCAACTGGTGTTATTTATTTCGTTATTTATTCCTTATTCCACAAAAGCTGTTTTATATGTTGATAT AAAAAAAAGCAATATTGGTAATATTGATCTTGTTGTATCTAAATGTGCATGCAAGACAGAAGTGGAAAATGAGCTAAGTG AAAGCATCACAAAAGTAATTGAAACAAATCTATCTAATTGTGGCTTATTTAATGTGAAACGTGACGCGAAAGTTGAGTCT TGGAAAAGCGATACTGTAGTCACAATAAGTTTAAGTGAAGTATCAAACAGAAATTTAGAGCTATCTTTTCGTTTATCTGA CAGCTTTACAAACAGAGAATTGCTTACTCAGTCGGTTGTTTTTCTAGCAAAAGACTGGAGGAAAATTAGTCATCTTGTTT CAGATCTGATACATGATAGATTGATTGGTGAGAAAGGGCATTTCAATACAAAAATTACATATATCGCTGAAGAAAAAGAT AGCAATTACAAATCCGTCCGTAAAATTGCTGTGATGAATCAAGATGGAAGTAATATAAAGTACTTAACAAATGGTGAGAA ATTTGTGTCAACACCAAGATTTTCACCAAATGGAAAGGGTATTGTTTATATATCATACACAAATGGTAAAAGTTATATAA TATTAAAAAATTTAAAAGATAACACTGAATCAATAATCAGCGCATTTGAAGGAGTTATTTCTGCACCAAGATTTTCTCCT GATGGTAAATCTCTTTTTATTTCCCACTCATTGAGTGGTGAAACAAATATATTATCTCTAGACTTAAGCAGTAAACGAAC AAAAAAAATTACTAAAGGTTCAGCTATAAGTACTTCTCCCTCTTTGTCTCCAGATCAAAAGTACATGGTTTTTAGTTCTG ATATAAGTGGAAGTCAGCAACTATATATCATAGATTTCACTAAAAAAAGCAAAAAACCCAAGAGAATTAGTTTTGGAAAT GGAAGATATGCTACACCTGTTTGGTCGCCAAAAGGAGATCTGATAGCTTTTACAAAAATTCAGTCAGGAAAATTTTACAT AGGAGTTATGAAGCCAGATGGCAAAGAAGAGCGCTTGCTTTCAGAGGGACATAAAATTGAATCTCCGGCATGGCTACCAA ATGGCAGAGAAATTATCTTTACTAACGCAGAATCACCAAGCAACTCTAAATTATATTTAGTAGATTTAGTAAAGAAAAAT CAAAAAATGGTTTTTACTCCAACGAATGCTTCTTTACCAGATTGGTCTTATTTTTGA
Upstream 100 bases:
>100_bases GTGTCAAGTACTGCAGAAATTGATTTACTCTACTGTCATGCAGTTTAACTTCAAAAGTAAGCTATTTGCTGAGATGAAAG GAGGTAATGCAAGAAATCTA
Downstream 100 bases:
>100_bases AAGTAGATCTATAAAATCGGTATAAATCTTGCTTTATCTTAATCGTTTATAACCTTCGGTACTACGAAATACCCATGCTC TGATTTTGTATTGGATAATA
Product: translocation protein TolB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKLFVQLVLFISLFIPYSTKAVLYVDIKKSNIGNIDLVVSKCACKTEVENELSESITKVIETNLSNCGLFNVKRDAKVES WKSDTVVTISLSEVSNRNLELSFRLSDSFTNRELLTQSVVFLAKDWRKISHLVSDLIHDRLIGEKGHFNTKITYIAEEKD SNYKSVRKIAVMNQDGSNIKYLTNGEKFVSTPRFSPNGKGIVYISYTNGKSYIILKNLKDNTESIISAFEGVISAPRFSP DGKSLFISHSLSGETNILSLDLSSKRTKKITKGSAISTSPSLSPDQKYMVFSSDISGSQQLYIIDFTKKSKKPKRISFGN GRYATPVWSPKGDLIAFTKIQSGKFYIGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFTNAESPSNSKLYLVDLVKKN QKMVFTPTNASLPDWSYF
Sequences:
>Translated_418_residues MKLFVQLVLFISLFIPYSTKAVLYVDIKKSNIGNIDLVVSKCACKTEVENELSESITKVIETNLSNCGLFNVKRDAKVES WKSDTVVTISLSEVSNRNLELSFRLSDSFTNRELLTQSVVFLAKDWRKISHLVSDLIHDRLIGEKGHFNTKITYIAEEKD SNYKSVRKIAVMNQDGSNIKYLTNGEKFVSTPRFSPNGKGIVYISYTNGKSYIILKNLKDNTESIISAFEGVISAPRFSP DGKSLFISHSLSGETNILSLDLSSKRTKKITKGSAISTSPSLSPDQKYMVFSSDISGSQQLYIIDFTKKSKKPKRISFGN GRYATPVWSPKGDLIAFTKIQSGKFYIGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFTNAESPSNSKLYLVDLVKKN QKMVFTPTNASLPDWSYF >Mature_418_residues MKLFVQLVLFISLFIPYSTKAVLYVDIKKSNIGNIDLVVSKCACKTEVENELSESITKVIETNLSNCGLFNVKRDAKVES WKSDTVVTISLSEVSNRNLELSFRLSDSFTNRELLTQSVVFLAKDWRKISHLVSDLIHDRLIGEKGHFNTKITYIAEEKD SNYKSVRKIAVMNQDGSNIKYLTNGEKFVSTPRFSPNGKGIVYISYTNGKSYIILKNLKDNTESIISAFEGVISAPRFSP DGKSLFISHSLSGETNILSLDLSSKRTKKITKGSAISTSPSLSPDQKYMVFSSDISGSQQLYIIDFTKKSKKPKRISFGN GRYATPVWSPKGDLIAFTKIQSGKFYIGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFTNAESPSNSKLYLVDLVKKN QKMVFTPTNASLPDWSYF
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0823
COG function: function code U; Periplasmic component of the Tol biopolymer transport system
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tolB family [H]
Homologues:
Organism=Escherichia coli, GI1786961, Length=383, Percent_Identity=24.0208877284595, Blast_Score=127, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011659 - InterPro: IPR014167 - InterPro: IPR007195 - InterPro: IPR015943 [H]
Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]
EC number: NA
Molecular weight: Translated: 46866; Mature: 46866
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFVQLVLFISLFIPYSTKAVLYVDIKKSNIGNIDLVVSKCACKTEVENELSESITKVI CHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH ETNLSNCGLFNVKRDAKVESWKSDTVVTISLSEVSNRNLELSFRLSDSFTNRELLTQSVV HCCCCCCCEEEECCCCCCCCCCCCEEEEEEEHHCCCCCEEEEEEECCCCCCHHHHHHHHH FLAKDWRKISHLVSDLIHDRLIGEKGHFNTKITYIAEEKDSNYKSVRKIAVMNQDGSNIK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHEEEEEEECCCCCCEE YLTNGEKFVSTPRFSPNGKGIVYISYTNGKSYIILKNLKDNTESIISAFEGVISAPRFSP EEECCCCEEECCCCCCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCC DGKSLFISHSLSGETNILSLDLSSKRTKKITKGSAISTSPSLSPDQKYMVFSSDISGSQQ CCCEEEEEECCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEE LYIIDFTKKSKKPKRISFGNGRYATPVWSPKGDLIAFTKIQSGKFYIGVMKPDGKEERLL EEEEEECCCCCCCCEEECCCCEEECCEECCCCCEEEEEEEECCEEEEEEECCCCHHHHHH SEGHKIESPAWLPNGREIIFTNAESPSNSKLYLVDLVKKNQKMVFTPTNASLPDWSYF HCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MKLFVQLVLFISLFIPYSTKAVLYVDIKKSNIGNIDLVVSKCACKTEVENELSESITKVI CHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH ETNLSNCGLFNVKRDAKVESWKSDTVVTISLSEVSNRNLELSFRLSDSFTNRELLTQSVV HCCCCCCCEEEECCCCCCCCCCCCEEEEEEEHHCCCCCEEEEEEECCCCCCHHHHHHHHH FLAKDWRKISHLVSDLIHDRLIGEKGHFNTKITYIAEEKDSNYKSVRKIAVMNQDGSNIK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHEEEEEEECCCCCCEE YLTNGEKFVSTPRFSPNGKGIVYISYTNGKSYIILKNLKDNTESIISAFEGVISAPRFSP EEECCCCEEECCCCCCCCCEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCC DGKSLFISHSLSGETNILSLDLSSKRTKKITKGSAISTSPSLSPDQKYMVFSSDISGSQQ CCCEEEEEECCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEE LYIIDFTKKSKKPKRISFGNGRYATPVWSPKGDLIAFTKIQSGKFYIGVMKPDGKEERLL EEEEEECCCCCCCCEEECCCCEEECCEECCCCCEEEEEEEECCEEEEEEECCCCHHHHHH SEGHKIESPAWLPNGREIIFTNAESPSNSKLYLVDLVKKNQKMVFTPTNASLPDWSYF HCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA