| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is gltX
Identifier: 190570625
GI number: 190570625
Start: 174528
End: 175862
Strand: Direct
Name: gltX
Synonym: WPa_0166
Alternate gene names: 190570625
Gene position: 174528-175862 (Clockwise)
Preceding gene: 190570622
Following gene: 190570633
Centisome position: 11.77
GC content: 34.38
Gene sequence:
>1335_bases ATGCTAACAAGATTCGCTCCAAGCCCAACTGGCTACCTACATGTAGGAAACATACGCACTGCACTCATTTGTTGGATGTA CACACGTAATCAAAATGGAAAATTTTTACTACGTTTTGATGATACTGATCTTGAGCGTTCAGATATCAAATATGTAGATA ATATCATAGAAGACCTAAAATGGATTGGCATAAATTGGAATTCAAGTTTTAAGCAATCAGAGCGTTTTGAGCGCTATAAC GAGGTGTTCTTACAGTTAATGAAAGAAGGTCATATTTATGCATGTTATGAAACAAGAGAAGAATTAGACACTAAACGAAA ATTGCAATTAAAACAAGGTTTCCCCCCTGTTTACGATAAAGGTGCGTTGCTTTTAACTGAGCAAGAGAAAATTCGTTATG AGCAAGAAGGACGAAAACCACATTTCAGATTTAAATTGGATAGAAATAAAACTGTAAAATGGAATGATGAAGTTAAAGGC GAAATAAATATTGCAACAATTCATATCAGCGATCCTGTAGTAAAAAGAGAAGATGGAATTTATACGTACATGCTACCTTC TGTTATTGATGACATTGACTTTAATGTAACCCATGTTGTACGTGGGGAAGATCATGTAACTAATACCGCAGTTCAGATTC AAATGATTCAAGCATTAAAAGCGAAAATTCCTATCTTTGCCCACCTTCCCTTACTACACTTTGATGATAGCAAAATATCG AAACGGAAAGGCGGGCTGGATATTAAGTCCATAAGAGAAGATGAGATTGAATCAATGGCGCTAACTAGCTATTTAGCAAA GCTTGGAACATCTGATCCGATAGAAGCTTATATTGATATGCAGTCTTTAATTGACTCATTTGATATCAAAAAATTTAGTT CAGCATCTTTACAATTCAGCTTGAGTGAAATGTATAAGCTAAATAGCAAAGTGCTACAACAAATGCCATTTGAAATGGTG CAAGATCGTTTAAGTCAAATTGGCTCAGAGTTTTGGTATTTTATAAGGAGTAATATAGAAAAGTTTTCTGAAGTGGCCAA ATGGTGGAAAATATGCAAATTTGGTATAGAACCTGTGGTTCTTAATAAAGAGTTTATAAAAATAGCGCTAAGCACATTAC CTCAAGGTGATTGTAATGAAAACACATTATCAGAGTGGGTTAAAAATATTCGACAGACAATTGATATAAAGGCAAAAGAT CTATTTATGCAGTTGCGCCTCGCTTTAACAGGAACAGAAACAGGTCCAGAACTCGCTAAATTATTAATTTTTATCGGTAG AGAGAGCATTATTGCAAGGTTAGAAGAAAGCCAAAGAATTATACAAAAGGTTTAA
Upstream 100 bases:
>100_bases TGTTCGCTGTACTTTGTAGCAACTAACACCAAGACAAAGAAGAATCTTGCTTTAGCAGTACATTTATATAAAATTAAAAT AAACTAAAGTAATCATTTAA
Downstream 100 bases:
>100_bases ATGCACCGAATGTATTTTGAATGACACCAATAAGCATTGTTCAGGAAATGTGAAAATATTAGATTTCTTGTCATTCCAGT TTCTGCTCCTGTCATTCAAG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase 1; GluRS 1
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MLTRFAPSPTGYLHVGNIRTALICWMYTRNQNGKFLLRFDDTDLERSDIKYVDNIIEDLKWIGINWNSSFKQSERFERYN EVFLQLMKEGHIYACYETREELDTKRKLQLKQGFPPVYDKGALLLTEQEKIRYEQEGRKPHFRFKLDRNKTVKWNDEVKG EINIATIHISDPVVKREDGIYTYMLPSVIDDIDFNVTHVVRGEDHVTNTAVQIQMIQALKAKIPIFAHLPLLHFDDSKIS KRKGGLDIKSIREDEIESMALTSYLAKLGTSDPIEAYIDMQSLIDSFDIKKFSSASLQFSLSEMYKLNSKVLQQMPFEMV QDRLSQIGSEFWYFIRSNIEKFSEVAKWWKICKFGIEPVVLNKEFIKIALSTLPQGDCNENTLSEWVKNIRQTIDIKAKD LFMQLRLALTGTETGPELAKLLIFIGRESIIARLEESQRIIQKV
Sequences:
>Translated_444_residues MLTRFAPSPTGYLHVGNIRTALICWMYTRNQNGKFLLRFDDTDLERSDIKYVDNIIEDLKWIGINWNSSFKQSERFERYN EVFLQLMKEGHIYACYETREELDTKRKLQLKQGFPPVYDKGALLLTEQEKIRYEQEGRKPHFRFKLDRNKTVKWNDEVKG EINIATIHISDPVVKREDGIYTYMLPSVIDDIDFNVTHVVRGEDHVTNTAVQIQMIQALKAKIPIFAHLPLLHFDDSKIS KRKGGLDIKSIREDEIESMALTSYLAKLGTSDPIEAYIDMQSLIDSFDIKKFSSASLQFSLSEMYKLNSKVLQQMPFEMV QDRLSQIGSEFWYFIRSNIEKFSEVAKWWKICKFGIEPVVLNKEFIKIALSTLPQGDCNENTLSEWVKNIRQTIDIKAKD LFMQLRLALTGTETGPELAKLLIFIGRESIIARLEESQRIIQKV >Mature_444_residues MLTRFAPSPTGYLHVGNIRTALICWMYTRNQNGKFLLRFDDTDLERSDIKYVDNIIEDLKWIGINWNSSFKQSERFERYN EVFLQLMKEGHIYACYETREELDTKRKLQLKQGFPPVYDKGALLLTEQEKIRYEQEGRKPHFRFKLDRNKTVKWNDEVKG EINIATIHISDPVVKREDGIYTYMLPSVIDDIDFNVTHVVRGEDHVTNTAVQIQMIQALKAKIPIFAHLPLLHFDDSKIS KRKGGLDIKSIREDEIESMALTSYLAKLGTSDPIEAYIDMQSLIDSFDIKKFSSASLQFSLSEMYKLNSKVLQQMPFEMV QDRLSQIGSEFWYFIRSNIEKFSEVAKWWKICKFGIEPVVLNKEFIKIALSTLPQGDCNENTLSEWVKNIRQTIDIKAKD LFMQLRLALTGTETGPELAKLLIFIGRESIIARLEESQRIIQKV
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=483, Percent_Identity=26.2939958592132, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI4826960, Length=106, Percent_Identity=31.1320754716981, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI62241042, Length=242, Percent_Identity=25.6198347107438, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1788743, Length=465, Percent_Identity=30.752688172043, Blast_Score=245, Evalue=4e-66, Organism=Escherichia coli, GI226510925, Length=248, Percent_Identity=29.0322580645161, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1786895, Length=150, Percent_Identity=30.6666666666667, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71993394, Length=476, Percent_Identity=27.1008403361345, Blast_Score=153, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6324540, Length=498, Percent_Identity=27.710843373494, Blast_Score=163, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6321192, Length=246, Percent_Identity=27.6422764227642, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6324742, Length=114, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI24665321, Length=479, Percent_Identity=29.4363256784969, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24649466, Length=248, Percent_Identity=25, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE1_WOLPP (B3CNK5)
Other databases:
- EMBL: AM999887 - RefSeq: YP_001974983.1 - EnsemblBacteria: EBWOLT00000000671 - GeneID: 6385170 - GenomeReviews: AM999887_GR - KEGG: wpi:WPa_0166 - GeneTree: EBGT00050000030976 - HOGENOM: HBG628189 - OMA: PHWRFKL - ProtClustDB: PRK12558 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 51763; Mature: 51763
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 241-241
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRFAPSPTGYLHVGNIRTALICWMYTRNQNGKFLLRFDDTDLERSDIKYVDNIIEDLK CCCCCCCCCCCEEEECCHHEEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHE WIGINWNSSFKQSERFERYNEVFLQLMKEGHIYACYETREELDTKRKLQLKQGFPPVYDK EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHCHHHHHHHHCCCCCCCCC GALLLTEQEKIRYEQEGRKPHFRFKLDRNKTVKWNDEVKGEINIATIHISDPVVKREDGI CEEEEECHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCEEEEEEEEECCCCEECCCCE YTYMLPSVIDDIDFNVTHVVRGEDHVTNTAVQIQMIQALKAKIPIFAHLPLLHFDDSKIS EEEECHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEECCCHHH KRKGGLDIKSIREDEIESMALTSYLAKLGTSDPIEAYIDMQSLIDSFDIKKFSSASLQFS HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE LSEMYKLNSKVLQQMPFEMVQDRLSQIGSEFWYFIRSNIEKFSEVAKWWKICKFGIEPVV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE LNKEFIKIALSTLPQGDCNENTLSEWVKNIRQTIDIKAKDLFMQLRLALTGTETGPELAK ECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCHHHHH LLIFIGRESIIARLEESQRIIQKV HHHHHCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLTRFAPSPTGYLHVGNIRTALICWMYTRNQNGKFLLRFDDTDLERSDIKYVDNIIEDLK CCCCCCCCCCCEEEECCHHEEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHE WIGINWNSSFKQSERFERYNEVFLQLMKEGHIYACYETREELDTKRKLQLKQGFPPVYDK EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHCHHHHHHHHCCCCCCCCC GALLLTEQEKIRYEQEGRKPHFRFKLDRNKTVKWNDEVKGEINIATIHISDPVVKREDGI CEEEEECHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCEEEEEEEEECCCCEECCCCE YTYMLPSVIDDIDFNVTHVVRGEDHVTNTAVQIQMIQALKAKIPIFAHLPLLHFDDSKIS EEEECHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEECCCHHH KRKGGLDIKSIREDEIESMALTSYLAKLGTSDPIEAYIDMQSLIDSFDIKKFSSASLQFS HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE LSEMYKLNSKVLQQMPFEMVQDRLSQIGSEFWYFIRSNIEKFSEVAKWWKICKFGIEPVV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE LNKEFIKIALSTLPQGDCNENTLSEWVKNIRQTIDIKAKDLFMQLRLALTGTETGPELAK ECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCHHHHH LLIFIGRESIIARLEESQRIIQKV HHHHHCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA