Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 189499216

GI number: 189499216

Start: 224897

End: 225754

Strand: Reverse

Name: yebA [C]

Synonym: Cphamn1_0236

Alternate gene names: 189499216

Gene position: 225754-224897 (Counterclockwise)

Preceding gene: 189499217

Following gene: 189499215

Centisome position: 8.25

GC content: 54.43

Gene sequence:

>858_bases
ATGACACGCCGCCACCTCACCATCGTTGTTCTGCTCCTCCTCTGTTCCCTGTTGAACAGGGGATCGGACGCAGCAGAAAA
CAACAAACCAGACCTGGCTCTTGACGCGACAACAAAGGAACAGGGAGAGTTCTTTGTCGCGACAGTCAACGGAAGTTCCT
CCCGGCCTGATCTCTGGTTCAACGGCCAAAGCTTCGCCATGTTCTGGCAAAACGACAGCAGCTACCGCGCGCTCGTCCCG
GTTGAAAACATGCTGAAGCCCGGCAGCTATGCCCTGCTGGCGAAATCGAACGGCTGGAAAGAAAAAATACCGGTAGAGGT
CACTTCGAACAACCTGCCCGTACAGAAAATATGGCTCGACGAGAAAACCAACAGCCTGAAAGCCACAAAAGAGGAAAAAG
CGCAGGTGAAAGCCGCATTGAGAACCGTCAGCGAGAGCAAGCTCTGGTCGGACCTGTTCAGCTACCCCTCACAGGGAAGA
AAATCCAGTCCCTTCGGCGTAAAACGCTCCTACAACGGAGCACCGGTATCGAGCTACCACAAGGGAATCGACATCGCTGT
CCCTCAGGGTACGCCCGTCCTGAGTCCGGCAAAAGGAAAAATCGTGCTTACCGGCTATGAGGCGGAACGGTTTCACGTAC
ACGGCAACACCGTCATCATCGACCACGGCCAGGGTTTGACCTCGATCTACATGCACCTGCACTCCATATCCGTCAATGAA
GGAGATATCGTCAGCAAGGGGGACACCATAGGCACAGTCGGCAGCACCGGCATCTCCACCGGCGCACACCTCCACTGGGG
GGTTTATTTATACGGCACAAGTGTGGATCCGGAGTTATTTGTGAAGAATCAGTATTGA

Upstream 100 bases:

>100_bases
AACTACTCCTGCGGCATGATTGAACTCGACAATACTTTTCTGACCGTTAGCGACCAGAGCTTGAACCTGCTGCATAAACT
GAAAATCACCTGACCAGTCC

Downstream 100 bases:

>100_bases
AGAGAAATGGGGCGAAAGCTATTTTATGGTTGTTTTTCTTGACGAGTTTATCTATTTTTTTATTGAAAACGGTAATTGCC
AAACACTAATCACTGCCCCA

Product: Peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTRRHLTIVVLLLLCSLLNRGSDAAENNKPDLALDATTKEQGEFFVATVNGSSSRPDLWFNGQSFAMFWQNDSSYRALVP
VENMLKPGSYALLAKSNGWKEKIPVEVTSNNLPVQKIWLDEKTNSLKATKEEKAQVKAALRTVSESKLWSDLFSYPSQGR
KSSPFGVKRSYNGAPVSSYHKGIDIAVPQGTPVLSPAKGKIVLTGYEAERFHVHGNTVIIDHGQGLTSIYMHLHSISVNE
GDIVSKGDTIGTVGSTGISTGAHLHWGVYLYGTSVDPELFVKNQY

Sequences:

>Translated_285_residues
MTRRHLTIVVLLLLCSLLNRGSDAAENNKPDLALDATTKEQGEFFVATVNGSSSRPDLWFNGQSFAMFWQNDSSYRALVP
VENMLKPGSYALLAKSNGWKEKIPVEVTSNNLPVQKIWLDEKTNSLKATKEEKAQVKAALRTVSESKLWSDLFSYPSQGR
KSSPFGVKRSYNGAPVSSYHKGIDIAVPQGTPVLSPAKGKIVLTGYEAERFHVHGNTVIIDHGQGLTSIYMHLHSISVNE
GDIVSKGDTIGTVGSTGISTGAHLHWGVYLYGTSVDPELFVKNQY
>Mature_284_residues
TRRHLTIVVLLLLCSLLNRGSDAAENNKPDLALDATTKEQGEFFVATVNGSSSRPDLWFNGQSFAMFWQNDSSYRALVPV
ENMLKPGSYALLAKSNGWKEKIPVEVTSNNLPVQKIWLDEKTNSLKATKEEKAQVKAALRTVSESKLWSDLFSYPSQGRK
SSPFGVKRSYNGAPVSSYHKGIDIAVPQGTPVLSPAKGKIVLTGYEAERFHVHGNTVIIDHGQGLTSIYMHLHSISVNEG
DIVSKGDTIGTVGSTGISTGAHLHWGVYLYGTSVDPELFVKNQY

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=125, Percent_Identity=41.6, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI87082174, Length=249, Percent_Identity=25.7028112449799, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789099, Length=127, Percent_Identity=32.2834645669291, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 31226; Mature: 31094

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRHLTIVVLLLLCSLLNRGSDAAENNKPDLALDATTKEQGEFFVATVNGSSSRPDLWF
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEE
NGQSFAMFWQNDSSYRALVPVENMLKPGSYALLAKSNGWKEKIPVEVTSNNLPVQKIWLD
CCCEEEEEEECCCCCEEEECHHHHCCCCCEEEEEECCCCCEECCEEECCCCCCEEEEEEC
EKTNSLKATKEEKAQVKAALRTVSESKLWSDLFSYPSQGRKSSPFGVKRSYNGAPVSSYH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHHH
KGIDIAVPQGTPVLSPAKGKIVLTGYEAERFHVHGNTVIIDHGQGLTSIYMHLHSISVNE
CCEEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCEEEEECCCCHHHHEEEHEEEECCC
GDIVSKGDTIGTVGSTGISTGAHLHWGVYLYGTSVDPELFVKNQY
CCEEECCCCEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCC
>Mature Secondary Structure 
TRRHLTIVVLLLLCSLLNRGSDAAENNKPDLALDATTKEQGEFFVATVNGSSSRPDLWF
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEE
NGQSFAMFWQNDSSYRALVPVENMLKPGSYALLAKSNGWKEKIPVEVTSNNLPVQKIWLD
CCCEEEEEEECCCCCEEEECHHHHCCCCCEEEEEECCCCCEECCEEECCCCCCEEEEEEC
EKTNSLKATKEEKAQVKAALRTVSESKLWSDLFSYPSQGRKSSPFGVKRSYNGAPVSSYH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHHH
KGIDIAVPQGTPVLSPAKGKIVLTGYEAERFHVHGNTVIIDHGQGLTSIYMHLHSISVNE
CCEEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCEEEEECCCCHHHHEEEHEEEECCC
GDIVSKGDTIGTVGSTGISTGAHLHWGVYLYGTSVDPELFVKNQY
CCEEECCCCEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]