| Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
|---|---|
| Accession | NC_010831 |
| Length | 2,736,403 |
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The map label for this gene is 189499145
Identifier: 189499145
GI number: 189499145
Start: 157783
End: 158307
Strand: Direct
Name: 189499145
Synonym: Cphamn1_0159
Alternate gene names: NA
Gene position: 157783-158307 (Clockwise)
Preceding gene: 189499144
Following gene: 189499146
Centisome position: 5.77
GC content: 51.62
Gene sequence:
>525_bases ATGAAACCACTCAAACAGGTCGCTCAGGCTTACATGGCCCTGAGTGAAGGAGAGAAAAGACTGAAGGAAGAAGCTTTTGA AGAGGCGGTTGCCGAATATCGGAAAGCGATGGATGTGACGCGTACGATCCCTGAAGAGGAGGTTTTCGATCATGACGGTT TCGATGCTCTTTGTCATGCCGGACTTTCAGGGGCTTTTGCAAAGCTCGGGCGTTATGATGAATGCCTTCTTTCGGCCGAC AATGCACTGCACTATTTCAACCGGCGCGGCGAGCTGCACCAGGATGAGGGAAAGCTCTGGATCGCAGCCGTTGTAAATCG TGCTGTCGGACTCGCCGGTACAGGCCGTTCCTCAGATGCGCTGAAAGCTTTCAGAATGGCAGATGAGATGGTGGCTGAAC GGAAAGGAGAGATAGATGACAAGGAGAGGCTTCAGAAAATGATCGCCGACAATATCGCCATGCTGCAAACTTCAATGCCT GAGGATACTGCAAAACGCAAGGCATGGTGGGAATTCTGGTCCTGA
Upstream 100 bases:
>100_bases AACAGCACTCAATCAGCTCGGTCGTCCTGAAATTCCCGAAAAACTTGACACTTTTCTTCATAACGATGCCTCGGCGTTCA CGACTAAATGAAAGTTTTTT
Downstream 100 bases:
>100_bases ATGGCTTTGCGTCCGGAAAAAAATCAGGAGATCGGGAAAATCCTGGTAATCAGGTTGAGCTCCATTGGAGATATTGTGTT GACGACTCCTGTCCTTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKPLKQVAQAYMALSEGEKRLKEEAFEEAVAEYRKAMDVTRTIPEEEVFDHDGFDALCHAGLSGAFAKLGRYDECLLSAD NALHYFNRRGELHQDEGKLWIAAVVNRAVGLAGTGRSSDALKAFRMADEMVAERKGEIDDKERLQKMIADNIAMLQTSMP EDTAKRKAWWEFWS
Sequences:
>Translated_174_residues MKPLKQVAQAYMALSEGEKRLKEEAFEEAVAEYRKAMDVTRTIPEEEVFDHDGFDALCHAGLSGAFAKLGRYDECLLSAD NALHYFNRRGELHQDEGKLWIAAVVNRAVGLAGTGRSSDALKAFRMADEMVAERKGEIDDKERLQKMIADNIAMLQTSMP EDTAKRKAWWEFWS >Mature_174_residues MKPLKQVAQAYMALSEGEKRLKEEAFEEAVAEYRKAMDVTRTIPEEEVFDHDGFDALCHAGLSGAFAKLGRYDECLLSAD NALHYFNRRGELHQDEGKLWIAAVVNRAVGLAGTGRSSDALKAFRMADEMVAERKGEIDDKERLQKMIADNIAMLQTSMP EDTAKRKAWWEFWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19705; Mature: 19705
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLKQVAQAYMALSEGEKRLKEEAFEEAVAEYRKAMDVTRTIPEEEVFDHDGFDALCHA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHH GLSGAFAKLGRYDECLLSADNALHYFNRRGELHQDEGKLWIAAVVNRAVGLAGTGRSSDA CHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHH LKAFRMADEMVAERKGEIDDKERLQKMIADNIAMLQTSMPEDTAKRKAWWEFWS HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKPLKQVAQAYMALSEGEKRLKEEAFEEAVAEYRKAMDVTRTIPEEEVFDHDGFDALCHA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHH GLSGAFAKLGRYDECLLSADNALHYFNRRGELHQDEGKLWIAAVVNRAVGLAGTGRSSDA CHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHH LKAFRMADEMVAERKGEIDDKERLQKMIADNIAMLQTSMPEDTAKRKAWWEFWS HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA