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The map label for this gene is scpA [H]

Identifier: 189499105

GI number: 189499105

Start: 104238

End: 104975

Strand: Direct

Name: scpA [H]

Synonym: Cphamn1_0111

Alternate gene names: 189499105

Gene position: 104238-104975 (Clockwise)

Preceding gene: 189499103

Following gene: 189499106

Centisome position: 3.81

GC content: 48.1

Gene sequence:

>738_bases
ATGTTTCGAATAAGCCTGGATGAGTTTGAGGGTCCGCTTGACCTGCTTCTCTTCTTTATCAAGAGGGACGAACTTGATAT
TTATAATATCCCGATTTCCAGAATTACCAAAGACTTTATCGGATACCTCGAGGCCATGCAGAGCCTCAATCTCGAAGTGG
CCGCCGAATTCATCTACATGGCTTCGTTACTGATGAGTATCAAGGCCAGAATGCTTCTGCCAAATGAAACTTCCGAAGAG
GGCGATGCATCCGAATTCGACCCCAGAACGGAACTGGTCGAACGCCTCATGGAGTACAAGCGCATCAAGGAGGGGGCGGA
AAAAATGCGTTCACTCGAGGAAACGAGGAGCGCCATGTTTGCCAGAGGGTATTATGAATCGTTCGAGCCGGAAGTGATCG
ACGAACTCGATGAGCCGGTCAACCGTTCCACGCTCTATCATCTTATCATGACCTATAAATCGGTTATGGAGAATATGCCG
AAAGTGCATGTGCAGAACGTAGACGAAGCTCCGGTAACTGTTGATGAACAGAGTGCGTTGATTCTCTCGAAACTGAGGGA
AACAATACAGATCTCATTCAGAACGATACTTAAAGAAGTCGGTGAACCTCTTGTGCTTGTCGTTACCTTTCTTGCTGTGC
TCGAACTCTGCCGCCGTCAGAAGATCGTGGTGATTGTGAAGGACGGATATGATGATTTCTGGATGTCGAGCAGGCAGCAT
CCATCATCCGGTGCCTGA

Upstream 100 bases:

>100_bases
GTCTATGAGTGCCCGGAAATACGACGTTGTATGGAAAGCTAAAGCTATTTATGGAATAATTTCTATTTTATACTTCTAAA
CTACCCAAAGAGCAAGCAGT

Downstream 100 bases:

>100_bases
ATTTTTCGCAACACAGTCGTAAGAACAGCGATGGCGCATGAATTCGACGGAAAAAAGTATGAACAGGCCTCGTCCCACCA
GAAAGAATGGGGAATGGGTC

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MFRISLDEFEGPLDLLLFFIKRDELDIYNIPISRITKDFIGYLEAMQSLNLEVAAEFIYMASLLMSIKARMLLPNETSEE
GDASEFDPRTELVERLMEYKRIKEGAEKMRSLEETRSAMFARGYYESFEPEVIDELDEPVNRSTLYHLIMTYKSVMENMP
KVHVQNVDEAPVTVDEQSALILSKLRETIQISFRTILKEVGEPLVLVVTFLAVLELCRRQKIVVIVKDGYDDFWMSSRQH
PSSGA

Sequences:

>Translated_245_residues
MFRISLDEFEGPLDLLLFFIKRDELDIYNIPISRITKDFIGYLEAMQSLNLEVAAEFIYMASLLMSIKARMLLPNETSEE
GDASEFDPRTELVERLMEYKRIKEGAEKMRSLEETRSAMFARGYYESFEPEVIDELDEPVNRSTLYHLIMTYKSVMENMP
KVHVQNVDEAPVTVDEQSALILSKLRETIQISFRTILKEVGEPLVLVVTFLAVLELCRRQKIVVIVKDGYDDFWMSSRQH
PSSGA
>Mature_245_residues
MFRISLDEFEGPLDLLLFFIKRDELDIYNIPISRITKDFIGYLEAMQSLNLEVAAEFIYMASLLMSIKARMLLPNETSEE
GDASEFDPRTELVERLMEYKRIKEGAEKMRSLEETRSAMFARGYYESFEPEVIDELDEPVNRSTLYHLIMTYKSVMENMP
KVHVQNVDEAPVTVDEQSALILSKLRETIQISFRTILKEVGEPLVLVVTFLAVLELCRRQKIVVIVKDGYDDFWMSSRQH
PSSGA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 28381; Mature: 28381

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRISLDEFEGPLDLLLFFIKRDELDIYNIPISRITKDFIGYLEAMQSLNLEVAAEFIYM
CEECCHHHHCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ASLLMSIKARMLLPNETSEEGDASEFDPRTELVERLMEYKRIKEGAEKMRSLEETRSAMF
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARGYYESFEPEVIDELDEPVNRSTLYHLIMTYKSVMENMPKVHVQNVDEAPVTVDEQSAL
HHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHH
ILSKLRETIQISFRTILKEVGEPLVLVVTFLAVLELCRRQKIVVIVKDGYDDFWMSSRQH
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCC
PSSGA
CCCCC
>Mature Secondary Structure
MFRISLDEFEGPLDLLLFFIKRDELDIYNIPISRITKDFIGYLEAMQSLNLEVAAEFIYM
CEECCHHHHCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ASLLMSIKARMLLPNETSEEGDASEFDPRTELVERLMEYKRIKEGAEKMRSLEETRSAMF
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARGYYESFEPEVIDELDEPVNRSTLYHLIMTYKSVMENMPKVHVQNVDEAPVTVDEQSAL
HHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHH
ILSKLRETIQISFRTILKEVGEPLVLVVTFLAVLELCRRQKIVVIVKDGYDDFWMSSRQH
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCC
PSSGA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA