Click here to switch to the map view.

The map label for this gene is 189499103

Identifier: 189499103

GI number: 189499103

Start: 102503

End: 103429

Strand: Direct

Name: 189499103

Synonym: Cphamn1_0109

Alternate gene names: NA

Gene position: 102503-103429 (Clockwise)

Preceding gene: 189499102

Following gene: 189499105

Centisome position: 3.75

GC content: 49.3

Gene sequence:

>927_bases
ATGATACCGAAACATGTATGCCTGCAACTCTGCGGCTCAACGCAATCCTTTGGAACGGGATGGCTTTCTCCGATGCCTGA
TTTACGAGACTATACTGTAGATACTCCGGAAATTGTCGATATGACAAAAAAACTGAAGCTGAGGCAGAGCGAAAAAGCGT
TGAAATCTGCTGTGCCGTATTCCGTGGATTTGAGAGGGTGGTGTTCAGAAGTCGAGAATCAGGGGAAAATCGGTTCCTGT
ACCGCGCATGCCGCCATGGGCGTCGTTGAGTATCTGCAACGCAGAGCCTTTGATGAGCATATCGATGGGTCAAGGCTTTT
TGTGTATAAAGCTACCCGCAACCTTATGCATGCAACCGGAGATACCGGAGCCTGGCTGAGAAATACCATGGGTGCGCTTG
TATTGTGCGGTGTCCCGCATGAGCAGTACTGGGAGTATACGGATGTCGATCCCGATTATGACAAGGAGCCGACGGGCTTT
GTCTATGCAGTGGCTGATAATTTCGAGGCGTTACGATATTTTTGTCATGATCCTCAGAGTGGAAATATGGACAAAAGAGC
GGTGCTTGAAAGCGTGAAAAGGTTTCTGGCTGCGGGTATCCCGTCCATGTTCGGCTTTTTCGGTTTTCCTTCGTTCAACA
GCTCGGATGACAAAGGATGTATTCCTTTTCCCTGTGGCAATGAGAAGGCTGAGTGGGGACACGCCATCGTCGCGGTCGGG
TTTGATGATAAAAAAGAGATAATCAACACGTCCTGTAAGAAGAGCAAGACAAAAGGGGCTCTGTTGATCAGGAACTCATG
GGGGACGGACTGGGGAGACAATGGATATGGCTGGCTGCCTTACGAGTATATCCTGCAGGGGCTCGCTGTCGATTTCTGGT
CGCTTCTGAGTATGGATATGGTTGATACCAAGCAGTTTGGACTGTAA

Upstream 100 bases:

>100_bases
TAACCCCTTTCCATCCGACAAGCCGGAAGATCACTTTGTGAATGGCAGTACGGATCAGTGGTCATGTATGCAAACGCTAA
AAAAAAATATGGAGGCAGTT

Downstream 100 bases:

>100_bases
GAGGTGTTGAGCTGTTGATGCGTTGATTTGTAAAGAACGCGAGCTACGCTTTCTGATCCTCCCGTGGTTTCAGGCTCGTT
CGTATATCGCTGTTGTACAA

Product: peptidase C1A papain

Products: NA

Alternate protein names: Cysteine Protease; Cysteine Proteinase; Papain Cysteine Protease Family Protein; Cystein Protease Protein; C1A Family Peptidase

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MIPKHVCLQLCGSTQSFGTGWLSPMPDLRDYTVDTPEIVDMTKKLKLRQSEKALKSAVPYSVDLRGWCSEVENQGKIGSC
TAHAAMGVVEYLQRRAFDEHIDGSRLFVYKATRNLMHATGDTGAWLRNTMGALVLCGVPHEQYWEYTDVDPDYDKEPTGF
VYAVADNFEALRYFCHDPQSGNMDKRAVLESVKRFLAAGIPSMFGFFGFPSFNSSDDKGCIPFPCGNEKAEWGHAIVAVG
FDDKKEIINTSCKKSKTKGALLIRNSWGTDWGDNGYGWLPYEYILQGLAVDFWSLLSMDMVDTKQFGL

Sequences:

>Translated_308_residues
MIPKHVCLQLCGSTQSFGTGWLSPMPDLRDYTVDTPEIVDMTKKLKLRQSEKALKSAVPYSVDLRGWCSEVENQGKIGSC
TAHAAMGVVEYLQRRAFDEHIDGSRLFVYKATRNLMHATGDTGAWLRNTMGALVLCGVPHEQYWEYTDVDPDYDKEPTGF
VYAVADNFEALRYFCHDPQSGNMDKRAVLESVKRFLAAGIPSMFGFFGFPSFNSSDDKGCIPFPCGNEKAEWGHAIVAVG
FDDKKEIINTSCKKSKTKGALLIRNSWGTDWGDNGYGWLPYEYILQGLAVDFWSLLSMDMVDTKQFGL
>Mature_308_residues
MIPKHVCLQLCGSTQSFGTGWLSPMPDLRDYTVDTPEIVDMTKKLKLRQSEKALKSAVPYSVDLRGWCSEVENQGKIGSC
TAHAAMGVVEYLQRRAFDEHIDGSRLFVYKATRNLMHATGDTGAWLRNTMGALVLCGVPHEQYWEYTDVDPDYDKEPTGF
VYAVADNFEALRYFCHDPQSGNMDKRAVLESVKRFLAAGIPSMFGFFGFPSFNSSDDKGCIPFPCGNEKAEWGHAIVAVG
FDDKKEIINTSCKKSKTKGALLIRNSWGTDWGDNGYGWLPYEYILQGLAVDFWSLLSMDMVDTKQFGL

Specific function: Unknown

COG id: COG4870

COG function: function code O; Cysteine protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34503; Mature: 34503

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPKHVCLQLCGSTQSFGTGWLSPMPDLRDYTVDTPEIVDMTKKLKLRQSEKALKSAVPY
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
SVDLRGWCSEVENQGKIGSCTAHAAMGVVEYLQRRAFDEHIDGSRLFVYKATRNLMHATG
CEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCC
DTGAWLRNTMGALVLCGVPHEQYWEYTDVDPDYDKEPTGFVYAVADNFEALRYFCHDPQS
CCHHHHHHHCCCEEEECCCHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCC
GNMDKRAVLESVKRFLAAGIPSMFGFFGFPSFNSSDDKGCIPFPCGNEKAEWGHAIVAVG
CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
FDDKKEIINTSCKKSKTKGALLIRNSWGTDWGDNGYGWLPYEYILQGLAVDFWSLLSMDM
CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VDTKQFGL
HHHHHCCC
>Mature Secondary Structure
MIPKHVCLQLCGSTQSFGTGWLSPMPDLRDYTVDTPEIVDMTKKLKLRQSEKALKSAVPY
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
SVDLRGWCSEVENQGKIGSCTAHAAMGVVEYLQRRAFDEHIDGSRLFVYKATRNLMHATG
CEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCC
DTGAWLRNTMGALVLCGVPHEQYWEYTDVDPDYDKEPTGFVYAVADNFEALRYFCHDPQS
CCHHHHHHHCCCEEEECCCHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCC
GNMDKRAVLESVKRFLAAGIPSMFGFFGFPSFNSSDDKGCIPFPCGNEKAEWGHAIVAVG
CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
FDDKKEIINTSCKKSKTKGALLIRNSWGTDWGDNGYGWLPYEYILQGLAVDFWSLLSMDM
CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VDTKQFGL
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA