| Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
|---|---|
| Accession | NC_010831 |
| Length | 2,736,403 |
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The map label for this gene is 189499089
Identifier: 189499089
GI number: 189499089
Start: 87607
End: 88209
Strand: Reverse
Name: 189499089
Synonym: Cphamn1_0095
Alternate gene names: NA
Gene position: 88209-87607 (Counterclockwise)
Preceding gene: 189499090
Following gene: 189499088
Centisome position: 3.22
GC content: 40.3
Gene sequence:
>603_bases ATGGAAGCACACGGGCATACTAAAGGAGAATACCTGTTTCACGCGGATCTTGAAAAAACCTCTACGTACCTTGCTGATCA GAAAAAGGTGATGGCGTTCAATCCCTTCTGTGAGCATGTAGAAGCAACTGATATCGAGAACATTTACAAATGGCATTTTC AGGTTACTGATCCTCGCGACAATCCTTTTCAGGTCATTTTTTACGTTCAACAGCATGATGAACTGCTGGTCTCGTTACCT GATGACTATCCTTATGAAAGCGAAATAAGCCTTCCCGATGAAATCGTCCAAAAGTATACAACAGGGAAAAAAATTCGCTG GGAACCGTATAAGATGACATATAACGTCAATGACCCGGATAACTATATTTTCGAAGGAAAAGTCAATGCTGAAATGACAC TTTTTGAACATCATGAAAACCAGACAACGGTCAATTTTTTAATGGATGTCGATATTACCTTCGAGCTCTATCCGATATTC AGAATATTCCCTGAAAAGATCATAACAACAATGACTAACGCAGGCATGTCTATGATCATGCAGATATCAGCAAACCAGAT GTTCCAGAGCATACTCAGCGACTTCAGAAGCATTCACCGCTAA
Upstream 100 bases:
>100_bases AACTGCCCGCCTTCAGGCAGAAGCCATTTAGCCGGCTTAAATCATCATACGGCCAGCACAGATACAGTATGATCAAAAAC ATAAAATGTTAGTATAGAGT
Downstream 100 bases:
>100_bases ACACAGATCGTTAAGCCAGAAAATCGTGCCAAAAGATTTGCAACAATTCACGACCTTTCGCCGTTTCTCGATCCCGATTG TCAGTGTTTTCTTCCTGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MEAHGHTKGEYLFHADLEKTSTYLADQKKVMAFNPFCEHVEATDIENIYKWHFQVTDPRDNPFQVIFYVQQHDELLVSLP DDYPYESEISLPDEIVQKYTTGKKIRWEPYKMTYNVNDPDNYIFEGKVNAEMTLFEHHENQTTVNFLMDVDITFELYPIF RIFPEKIITTMTNAGMSMIMQISANQMFQSILSDFRSIHR
Sequences:
>Translated_200_residues MEAHGHTKGEYLFHADLEKTSTYLADQKKVMAFNPFCEHVEATDIENIYKWHFQVTDPRDNPFQVIFYVQQHDELLVSLP DDYPYESEISLPDEIVQKYTTGKKIRWEPYKMTYNVNDPDNYIFEGKVNAEMTLFEHHENQTTVNFLMDVDITFELYPIF RIFPEKIITTMTNAGMSMIMQISANQMFQSILSDFRSIHR >Mature_200_residues MEAHGHTKGEYLFHADLEKTSTYLADQKKVMAFNPFCEHVEATDIENIYKWHFQVTDPRDNPFQVIFYVQQHDELLVSLP DDYPYESEISLPDEIVQKYTTGKKIRWEPYKMTYNVNDPDNYIFEGKVNAEMTLFEHHENQTTVNFLMDVDITFELYPIF RIFPEKIITTMTNAGMSMIMQISANQMFQSILSDFRSIHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23700; Mature: 23700
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAHGHTKGEYLFHADLEKTSTYLADQKKVMAFNPFCEHVEATDIENIYKWHFQVTDPRD CCCCCCCCCCEEEEECCHHHHHHHHCCCEEEEECHHHHCCCCCCCCCEEEEEEEEECCCC NPFQVIFYVQQHDELLVSLPDDYPYESEISLPDEIVQKYTTGKKIRWEPYKMTYNVNDPD CCEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEECCCCC NYIFEGKVNAEMTLFEHHENQTTVNFLMDVDITFELYPIFRIFPEKIITTMTNAGMSMIM CEEEEEECCCEEEEEEECCCCEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHCCHHHEE QISANQMFQSILSDFRSIHR HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEAHGHTKGEYLFHADLEKTSTYLADQKKVMAFNPFCEHVEATDIENIYKWHFQVTDPRD CCCCCCCCCCEEEEECCHHHHHHHHCCCEEEEECHHHHCCCCCCCCCEEEEEEEEECCCC NPFQVIFYVQQHDELLVSLPDDYPYESEISLPDEIVQKYTTGKKIRWEPYKMTYNVNDPD CCEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEECCCCC NYIFEGKVNAEMTLFEHHENQTTVNFLMDVDITFELYPIFRIFPEKIITTMTNAGMSMIM CEEEEEECCCEEEEEEECCCCEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHCCHHHEE QISANQMFQSILSDFRSIHR HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA