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The map label for this gene is yqhC [C]

Identifier: 189353860

GI number: 189353860

Start: 2166321

End: 2167160

Strand: Reverse

Name: yqhC [C]

Synonym: BMULJ_05112

Alternate gene names: 189353860

Gene position: 2167160-2166321 (Counterclockwise)

Preceding gene: 189353864

Following gene: 189353857

Centisome position: 87.63

GC content: 65.95

Gene sequence:

>840_bases
ATGACGCCCACGCTTGCCGTACCGCCTCACAGCCTGTCCGATACGTTGCGGTATCGGACCGACAACGCCGATCTCGGCGC
GATGCTCGCGCACTTTCGCCTGCTCGAGCCGGTGTTCGACGCGCTGCCCGATGTCGCTTTCTTCGTGAAGGACGCCAACG
GCCGCTACGCGCTCGTCAATCGCACGCTGGCGCTGCGCTGCGGCTACAAGGACAAGCGCGACCTGCTCGGCAAGACGACC
GACGAAGTCTTTCCGCGCCGTTTCGGGCGCAGCTATTTCGAGCAGGACATGGCGACGATCAACGCGGGCCAGCAGTTGAC
CGATCAGCTCGAGTTGCATCTGTATCCGGGGCGTCAGCCCGGCTGGTGCCTGACCTGCAAGGAGCCGCTGCGCGATGCGT
CGGGCAAGGTCGTCGGCCTCGCCGGCATTTCGCGCGACCTGAAAGCGCACGAAGGTTCGCATCCGGCCTACAGCAAGCTC
GCGGACGTCGTCCAGCACATCCAGGATCACTACGTGCAGCCGCTGAACCTGAAGCAGCTCGCGCAGATGGCGGGGATGTC
GGTCGCGCAGCTCGAGCGCTATTTCCACAAGGTGTTTCACCTGACGCCGCGTCAGGTGCTGTTGAAGACGCGCCTCGATG
CGGCCACGGCGCTGCTGGTCACGCACGACAAGGTGACCGACGTCGCGGCGTTATGCGGGTATACGGATCACAGCGCGTTT
ACGCGCCAGTTCAAGGCGACCGTCGGCGTGACGCCGACGGAGTACCGGATGATGCTGCAGGATCGGGCAGGGGAACGCAG
CGCGCGCGGCGGCGCGCCGGAGGCGGCGGCTCAGCGGTAG

Upstream 100 bases:

>100_bases
GTGCGCCACCGTGCGCGCACGCGTGCCCGCGGCTCGCGATGCATTACGCCGCGCACTTCTATAATCGTCGCCATCGCCTA
CTTGTTTCACGGATGCCGGG

Downstream 100 bases:

>100_bases
CCGAGCCCCTTGAGGACGGCCGTGCCGTCTTTCGTCAGGCGGAAGCTCGGCGCGGCATCGGCGTCGAGCTTGACCATCTC
GACGAGGCCCGCTTCCTGCA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Transcriptional Regulator With PAS/PAC Sensors AraC Family; Transcription Regulator; AraC/XylS Family Transcriptional Regulator; PAS/PAC Sensor Signal Transduction Histidine Kinase; Sensory Box/GGDEF Family Protein; L-Rhamnose Operon Transcriptional Activator; Transcriptional Regulator AraC; PAS Fold-4 Domain Protein; PAS Sensor Protein; Helix-Turn-Helix Domain-Containing Protein; Proline Utilization Regulator; Regulatory Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein AraC Family; Transcriptional Regulator Transcription Regulator Protein; PAS Fold Family Protein

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTPTLAVPPHSLSDTLRYRTDNADLGAMLAHFRLLEPVFDALPDVAFFVKDANGRYALVNRTLALRCGYKDKRDLLGKTT
DEVFPRRFGRSYFEQDMATINAGQQLTDQLELHLYPGRQPGWCLTCKEPLRDASGKVVGLAGISRDLKAHEGSHPAYSKL
ADVVQHIQDHYVQPLNLKQLAQMAGMSVAQLERYFHKVFHLTPRQVLLKTRLDAATALLVTHDKVTDVAALCGYTDHSAF
TRQFKATVGVTPTEYRMMLQDRAGERSARGGAPEAAAQR

Sequences:

>Translated_279_residues
MTPTLAVPPHSLSDTLRYRTDNADLGAMLAHFRLLEPVFDALPDVAFFVKDANGRYALVNRTLALRCGYKDKRDLLGKTT
DEVFPRRFGRSYFEQDMATINAGQQLTDQLELHLYPGRQPGWCLTCKEPLRDASGKVVGLAGISRDLKAHEGSHPAYSKL
ADVVQHIQDHYVQPLNLKQLAQMAGMSVAQLERYFHKVFHLTPRQVLLKTRLDAATALLVTHDKVTDVAALCGYTDHSAF
TRQFKATVGVTPTEYRMMLQDRAGERSARGGAPEAAAQR
>Mature_278_residues
TPTLAVPPHSLSDTLRYRTDNADLGAMLAHFRLLEPVFDALPDVAFFVKDANGRYALVNRTLALRCGYKDKRDLLGKTTD
EVFPRRFGRSYFEQDMATINAGQQLTDQLELHLYPGRQPGWCLTCKEPLRDASGKVVGLAGISRDLKAHEGSHPAYSKLA
DVVQHIQDHYVQPLNLKQLAQMAGMSVAQLERYFHKVFHLTPRQVLLKTRLDAATALLVTHDKVTDVAALCGYTDHSAFT
RQFKATVGVTPTEYRMMLQDRAGERSARGGAPEAAAQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31107; Mature: 30976

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTLAVPPHSLSDTLRYRTDNADLGAMLAHFRLLEPVFDALPDVAFFVKDANGRYALVN
CCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEE
RTLALRCGYKDKRDLLGKTTDEVFPRRFGRSYFEQDMATINAGQQLTDQLELHLYPGRQP
CEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCEEEEEECCCCC
GWCLTCKEPLRDASGKVVGLAGISRDLKAHEGSHPAYSKLADVVQHIQDHYVQPLNLKQL
CEEEECHHHHCCCCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH
AQMAGMSVAQLERYFHKVFHLTPRQVLLKTRLDAATALLVTHDKVTDVAALCGYTDHSAF
HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCHHHH
TRQFKATVGVTPTEYRMMLQDRAGERSARGGAPEAAAQR
HHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
TPTLAVPPHSLSDTLRYRTDNADLGAMLAHFRLLEPVFDALPDVAFFVKDANGRYALVN
CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEE
RTLALRCGYKDKRDLLGKTTDEVFPRRFGRSYFEQDMATINAGQQLTDQLELHLYPGRQP
CEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCEEEEEECCCCC
GWCLTCKEPLRDASGKVVGLAGISRDLKAHEGSHPAYSKLADVVQHIQDHYVQPLNLKQL
CEEEECHHHHCCCCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHH
AQMAGMSVAQLERYFHKVFHLTPRQVLLKTRLDAATALLVTHDKVTDVAALCGYTDHSAF
HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCCHHHH
TRQFKATVGVTPTEYRMMLQDRAGERSARGGAPEAAAQR
HHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA