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The map label for this gene is ytfH [C]

Identifier: 189352387

GI number: 189352387

Start: 444829

End: 445386

Strand: Direct

Name: ytfH [C]

Synonym: BMULJ_03606

Alternate gene names: 189352387

Gene position: 444829-445386 (Clockwise)

Preceding gene: 189352385

Following gene: 189352391

Centisome position: 17.99

GC content: 68.46

Gene sequence:

>558_bases
ATGCAACTCGTTGTGCGGCGGGCACGGGGCCCGCGCACGAATCGCCGGTGTCGCCGTGTGGGCGCCGGCAGGCCAGCGGA
GGAAAAGATGGCGAGGCAGAAAAGTCTGGCGGATTCGCATTGCCCGGTCGCGCGCGCGACCGACATCGTCGGCGATCGCT
GGGCGCTGCTGATCGTGCGCGACGCGTTCGACGGCGTGCGCCGGTTCGGCGATTTCCGTACGAGCCTCGGCGTCGCGAGC
AACATCCTGTCGGACCGCTTGAGGATGCTCGTGGAGGCCGGCGTATTCGACGTCGTGCCGGCGTCGGACGGCAGCGCGTA
TCAGGAATACGTCCTGACGAAGAAGGGCGAGGGACTGTTTCCGGTCATCGTGATGCTGCGCCAGTGGGGCGAAGCGAACC
TGTTCGCGCGCGGCGAGCCGCATTCGGTGCTGGTCGATCGCAAGACCGGCCGTGCGCTGCGCAAGCTCGCACTGCGGCAC
GACGACGGTCGACCGCTGAAGCCCGCGGACACGTTCGTGAAAAAGGTCGGCGACGCCGGCGACGCGACGCCGCGCTGA

Upstream 100 bases:

>100_bases
CGCCGCGGCGCCGGAAGAACAGGAAGACGTCATCGGTTTTCTCGTGCCTGATGTAGTTGCAAATTGAAACTGGTTGGAGT
GTAGGAAAAGTAGTTTTAAA

Downstream 100 bases:

>100_bases
GCGATCGGCCACTCGTGCGCGTGCTGATCCGTATGCCCGTCGCGGCGGCCGCGCCGATCAGTCCGTCGTCTGCAACGGAC
GGCGGCCGCCATGCGCGTCG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MQLVVRRARGPRTNRRCRRVGAGRPAEEKMARQKSLADSHCPVARATDIVGDRWALLIVRDAFDGVRRFGDFRTSLGVAS
NILSDRLRMLVEAGVFDVVPASDGSAYQEYVLTKKGEGLFPVIVMLRQWGEANLFARGEPHSVLVDRKTGRALRKLALRH
DDGRPLKPADTFVKKVGDAGDATPR

Sequences:

>Translated_185_residues
MQLVVRRARGPRTNRRCRRVGAGRPAEEKMARQKSLADSHCPVARATDIVGDRWALLIVRDAFDGVRRFGDFRTSLGVAS
NILSDRLRMLVEAGVFDVVPASDGSAYQEYVLTKKGEGLFPVIVMLRQWGEANLFARGEPHSVLVDRKTGRALRKLALRH
DDGRPLKPADTFVKKVGDAGDATPR
>Mature_185_residues
MQLVVRRARGPRTNRRCRRVGAGRPAEEKMARQKSLADSHCPVARATDIVGDRWALLIVRDAFDGVRRFGDFRTSLGVAS
NILSDRLRMLVEAGVFDVVPASDGSAYQEYVLTKKGEGLFPVIVMLRQWGEANLFARGEPHSVLVDRKTGRALRKLALRH
DDGRPLKPADTFVKKVGDAGDATPR

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 20519; Mature: 20519

Theoretical pI: Translated: 11.27; Mature: 11.27

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLVVRRARGPRTNRRCRRVGAGRPAEEKMARQKSLADSHCPVARATDIVGDRWALLIVR
CCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEHH
DAFDGVRRFGDFRTSLGVASNILSDRLRMLVEAGVFDVVPASDGSAYQEYVLTKKGEGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCHH
PVIVMLRQWGEANLFARGEPHSVLVDRKTGRALRKLALRHDDGRPLKPADTFVKKVGDAG
HHHHHHHHCCCCCEEECCCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
DATPR
CCCCC
>Mature Secondary Structure
MQLVVRRARGPRTNRRCRRVGAGRPAEEKMARQKSLADSHCPVARATDIVGDRWALLIVR
CCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEHH
DAFDGVRRFGDFRTSLGVASNILSDRLRMLVEAGVFDVVPASDGSAYQEYVLTKKGEGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCHH
PVIVMLRQWGEANLFARGEPHSVLVDRKTGRALRKLALRHDDGRPLKPADTFVKKVGDAG
HHHHHHHHCCCCCEEECCCCCEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
DATPR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]