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The map label for this gene is yeaM [H]

Identifier: 189352268

GI number: 189352268

Start: 313627

End: 314433

Strand: Direct

Name: yeaM [H]

Synonym: BMULJ_03487

Alternate gene names: 189352268

Gene position: 313627-314433 (Clockwise)

Preceding gene: 189352265

Following gene: 189352269

Centisome position: 12.68

GC content: 68.53

Gene sequence:

>807_bases
ATGCACAAGCTTTCACATGGCGCCGGCGCCGATCCGGCGGTGAGTCTCGTCCATTCCGCGACGCCGCGCCCGCTCGTGCT
GTTCGGCGGCTCGGTCGTCGAACCCGAATGGCGGCTCGAGCGGCACAGTCATCGGCACGCGCAGCTGCTCTATACGCTAA
GCGGCGTCATCTATTGCGAGATCGACGGCGGCGTATGGAGTGCGCCACCGCAATGCACGGTGTGGATTCCGGGCGACGTC
CCGCATGCCGCGCGCGGCTCGGCCGGCGCGACGTTTTACGCGGTGCTGATCGAGCCCGACGCCGCGCTCGCGCTGCCGAC
GCGCTGCTGCACGCTCGGCGTCTCGCCGCTGCTGCGCGAACTGCTGCTGAAGGCAGCGAGCTTTCCCAATCTGTACGACA
TCGACGGTCCGCAAGGCCGCCTGATGGCGACGCTGCTCGACGAACTCGTCGCAGCGCCCGTCGAGGATCTGTACCTGCCG
ATGCCCGCCGATCGCCGGCTGCGCAAACTGATCGATCATCTGCTCGACGAGCCGGCCGACAAGTCGCCGCTCGCCGAACT
CGCGCGGCGGGCCGGCATCAGCGAGCGCAGCCTCACGCGGCTCGCCGCGAAGGAACTCGGGATGAGCCTCGGCGACTGGC
GTCGGCGGCTGCACGTCGCGCTGTCGCTGCAGATGCTGACGACCGGCCGTCGCGTGCACCAGGTCGCGATCGACCTCGGC
TACGAAAGCGCGAGCAGCTTCGTAACGATGTTCCGCAAGGCAACGGGCAAACCGCCGACTCAGTACCTGTCCGACCGCCA
GCGCTGA

Upstream 100 bases:

>100_bases
GGTGCGGCGGGCGCGGCAGGGCTGCATTGCCGCCTTTCTGGTATAAGCACGGAGAGCCGGCGCACTGCGGCGCCGGGCTT
TCTCCATCGCTGACCGTTCC

Downstream 100 bases:

>100_bases
GCGGGCGCGCGCCGCACGCAATTTGGCCGGATTGAGCAAGCGCTTGGCCGGCGCGAAAAATGACGCGATCTGTGTCGCTC
CATAAAATGAGAATCGTTCT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MHKLSHGAGADPAVSLVHSATPRPLVLFGGSVVEPEWRLERHSHRHAQLLYTLSGVIYCEIDGGVWSAPPQCTVWIPGDV
PHAARGSAGATFYAVLIEPDAALALPTRCCTLGVSPLLRELLLKAASFPNLYDIDGPQGRLMATLLDELVAAPVEDLYLP
MPADRRLRKLIDHLLDEPADKSPLAELARRAGISERSLTRLAAKELGMSLGDWRRRLHVALSLQMLTTGRRVHQVAIDLG
YESASSFVTMFRKATGKPPTQYLSDRQR

Sequences:

>Translated_268_residues
MHKLSHGAGADPAVSLVHSATPRPLVLFGGSVVEPEWRLERHSHRHAQLLYTLSGVIYCEIDGGVWSAPPQCTVWIPGDV
PHAARGSAGATFYAVLIEPDAALALPTRCCTLGVSPLLRELLLKAASFPNLYDIDGPQGRLMATLLDELVAAPVEDLYLP
MPADRRLRKLIDHLLDEPADKSPLAELARRAGISERSLTRLAAKELGMSLGDWRRRLHVALSLQMLTTGRRVHQVAIDLG
YESASSFVTMFRKATGKPPTQYLSDRQR
>Mature_268_residues
MHKLSHGAGADPAVSLVHSATPRPLVLFGGSVVEPEWRLERHSHRHAQLLYTLSGVIYCEIDGGVWSAPPQCTVWIPGDV
PHAARGSAGATFYAVLIEPDAALALPTRCCTLGVSPLLRELLLKAASFPNLYDIDGPQGRLMATLLDELVAAPVEDLYLP
MPADRRLRKLIDHLLDEPADKSPLAELARRAGISERSLTRLAAKELGMSLGDWRRRLHVALSLQMLTTGRRVHQVAIDLG
YESASSFVTMFRKATGKPPTQYLSDRQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788091, Length=223, Percent_Identity=38.5650224215247, Blast_Score=163, Evalue=1e-41,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02311 AraC_binding [H]

EC number: NA

Molecular weight: Translated: 29362; Mature: 29362

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKLSHGAGADPAVSLVHSATPRPLVLFGGSVVEPEWRLERHSHRHAQLLYTLSGVIYCE
CCCCCCCCCCCHHHHHHHCCCCCEEEEECCCEECCHHHHHHHCCHHHHHHEEECCEEEEE
IDGGVWSAPPQCTVWIPGDVPHAARGSAGATFYAVLIEPDAALALPTRCCTLGVSPLLRE
ECCCEECCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCHHHHHHH
LLLKAASFPNLYDIDGPQGRLMATLLDELVAAPVEDLYLPMPADRRLRKLIDHLLDEPAD
HHHHHHCCCCCEECCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCC
KSPLAELARRAGISERSLTRLAAKELGMSLGDWRRRLHVALSLQMLTTGRRVHQVAIDLG
CCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
YESASSFVTMFRKATGKPPTQYLSDRQR
CHHHHHHHHHHHHHCCCCHHHHHCCCCC
>Mature Secondary Structure
MHKLSHGAGADPAVSLVHSATPRPLVLFGGSVVEPEWRLERHSHRHAQLLYTLSGVIYCE
CCCCCCCCCCCHHHHHHHCCCCCEEEEECCCEECCHHHHHHHCCHHHHHHEEECCEEEEE
IDGGVWSAPPQCTVWIPGDVPHAARGSAGATFYAVLIEPDAALALPTRCCTLGVSPLLRE
ECCCEECCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCHHHHHHH
LLLKAASFPNLYDIDGPQGRLMATLLDELVAAPVEDLYLPMPADRRLRKLIDHLLDEPAD
HHHHHHCCCCCEECCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCC
KSPLAELARRAGISERSLTRLAAKELGMSLGDWRRRLHVALSLQMLTTGRRVHQVAIDLG
CCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
YESASSFVTMFRKATGKPPTQYLSDRQR
CHHHHHHHHHHHHHCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]