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The map label for this gene is 189184851

Identifier: 189184851

GI number: 189184851

Start: 1980246

End: 1980794

Strand: Reverse

Name: 189184851

Synonym: OTT_1944

Alternate gene names: NA

Gene position: 1980794-1980246 (Counterclockwise)

Preceding gene: 189184852

Following gene: 189184849

Centisome position: 98.6

GC content: 32.24

Gene sequence:

>549_bases
ATGTTTATTCAAACTCAACAAACTCCAAATCCTAATTCACTAAAATTTTTTCCTGACCAAAAAATTAGTCCTGGTAACCC
AGTACATTTTAGTACCAGAGAAGAATGTACTCATAGTATTTTAGCACGTAAATTATTCTCAATTGAAAATGTTAAGGAAG
TATTTTTTGGCGAAGATTTTATTACTGTTACCAAAGTTAGCGATGGAAGTTGGGAAGTAATTAAACCTGAAATATTAACT
ATGCTAATGGACCATTTTGTAGCAGGATTACCAGTCTTTGAATCTGAAGCCGAAAAAAAAAATATAGAGCAAGCTAATCT
TTCAGAAATTGAGAAACAAATCATAGAAATTATTAACACTAAAGTTAGACCTGCAGTTGCAATGGATGGTGGAGACATAG
AATACCATAGCTTTAAAGATGGAATAGTAAAGCTACAAATGCGTGGAGCTTGTGTAGGTTGTCCAAGTTCTACTATGACA
TTAAAACAAGGTATTGAGTCATTACTAAAATACTATATTCCAGAGGTAGTATCTGTTGAGCAAGTTTAA

Upstream 100 bases:

>100_bases
TATAGAAATGGCGAATTAAAAGCACTATTATTACAAAAATTTAAAGATATTAAAGACAATTAACCACATTAGTATATCTT
AACACTTTATTATTTATATT

Downstream 100 bases:

>100_bases
CATTATCCAATTATTAAAAGCATGATTTCCACAAAAACATCAAAAAAAATCCATTTTTAATAGAAACACAAATTAGAATT
AAAATTGTAAATAATCATGA

Product: thioredoxin-like protein

Products: NA

Alternate protein names: Scaffold Protein Nfu/NifU; NifU Domain-Containing Protein; NifU Domain Protein; Nitrogen-Fixing NifU-Like; NifU-Like Protein; Nitrogen Fixation Protein; NifU-Like Domain Protein; NifU Related Protein; NifU Protein; Nitrogen-Fixing NifU Domain-Containing Protein; Thioredoxin-Like Protein; NifU-Like Domain-Containing Protein; NifU Family Protein; Nitrogen-Fixing NifU-Like Protein; Nitrogen-Fixing Nifu Domain Protein; Scaffold Protein Nfu/Nifu; Nitrogen-Fixing NifU; Nitrogen Fixation Protein NifU; Nif System Fes Cluster Assembly Nifu Family Protein; Nitrogen-Fixing Protein; NFU1 Iron-Sulfur Cluster Scaffold-Like Protein; Scaffold Protein Nfu/NifU-Like Protein; NifU Iron-Sulphur Cluster Scaffold Protein; Fe-S Cluster Assembly Protein NFU; Scaffold Protein Nfu/NifU N Terminal; Thioredoxin-Related Protein; NitrogeN-Fixing Nifu Domain Protein; Thioredoxin-Like Domain Protein; Nifu Protein; NifU Domain Containing Protein; Scaffold Protein Nfu/NifU N Terminal Domain Protein; HIRA-Interacting; Thioredoxin; NifU-Like Nitrogen Fixation Protein; Nitrogen-Fixing Protein NifU; Nitrogen-Fixing NifU C-Terminal; Iron-Sulfur Cluster Assembly Protein; Nitrogen Fixing Thioredoxin-Like Protein NifU

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MFIQTQQTPNPNSLKFFPDQKISPGNPVHFSTREECTHSILARKLFSIENVKEVFFGEDFITVTKVSDGSWEVIKPEILT
MLMDHFVAGLPVFESEAEKKNIEQANLSEIEKQIIEIINTKVRPAVAMDGGDIEYHSFKDGIVKLQMRGACVGCPSSTMT
LKQGIESLLKYYIPEVVSVEQV

Sequences:

>Translated_182_residues
MFIQTQQTPNPNSLKFFPDQKISPGNPVHFSTREECTHSILARKLFSIENVKEVFFGEDFITVTKVSDGSWEVIKPEILT
MLMDHFVAGLPVFESEAEKKNIEQANLSEIEKQIIEIINTKVRPAVAMDGGDIEYHSFKDGIVKLQMRGACVGCPSSTMT
LKQGIESLLKYYIPEVVSVEQV
>Mature_182_residues
MFIQTQQTPNPNSLKFFPDQKISPGNPVHFSTREECTHSILARKLFSIENVKEVFFGEDFITVTKVSDGSWEVIKPEILT
MLMDHFVAGLPVFESEAEKKNIEQANLSEIEKQIIEIINTKVRPAVAMDGGDIEYHSFKDGIVKLQMRGACVGCPSSTMT
LKQGIESLLKYYIPEVVSVEQV

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI50593025, Length=183, Percent_Identity=48.6338797814208, Blast_Score=181, Evalue=3e-46,
Organism=Homo sapiens, GI50593021, Length=183, Percent_Identity=48.6338797814208, Blast_Score=181, Evalue=3e-46,
Organism=Homo sapiens, GI50593023, Length=100, Percent_Identity=46, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI50593019, Length=100, Percent_Identity=46, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17541876, Length=186, Percent_Identity=46.7741935483871, Blast_Score=169, Evalue=5e-43,
Organism=Saccharomyces cerevisiae, GI6322811, Length=206, Percent_Identity=37.378640776699, Blast_Score=112, Evalue=4e-26,
Organism=Drosophila melanogaster, GI45551492, Length=184, Percent_Identity=46.195652173913, Blast_Score=173, Evalue=6e-44,
Organism=Drosophila melanogaster, GI24643765, Length=184, Percent_Identity=46.195652173913, Blast_Score=173, Evalue=6e-44,
Organism=Drosophila melanogaster, GI45556188, Length=184, Percent_Identity=46.195652173913, Blast_Score=173, Evalue=6e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20483; Mature: 20483

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIQTQQTPNPNSLKFFPDQKISPGNPVHFSTREECTHSILARKLFSIENVKEVFFGEDF
CCCCCCCCCCCCCEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE
ITVTKVSDGSWEVIKPEILTMLMDHFVAGLPVFESEAEKKNIEQANLSEIEKQIIEIINT
EEEEEECCCCCEEECHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCC
KVRPAVAMDGGDIEYHSFKDGIVKLQMRGACVGCPSSTMTLKQGIESLLKYYIPEVVSVE
CCCCEEEECCCCEEECCCCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHC
QV
CC
>Mature Secondary Structure
MFIQTQQTPNPNSLKFFPDQKISPGNPVHFSTREECTHSILARKLFSIENVKEVFFGEDF
CCCCCCCCCCCCCEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE
ITVTKVSDGSWEVIKPEILTMLMDHFVAGLPVFESEAEKKNIEQANLSEIEKQIIEIINT
EEEEEECCCCCEEECHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCC
KVRPAVAMDGGDIEYHSFKDGIVKLQMRGACVGCPSSTMTLKQGIESLLKYYIPEVVSVE
CCCCEEEECCCCEEECCCCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHC
QV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA