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The map label for this gene is yvbX [H]

Identifier: 189184749

GI number: 189184749

Start: 1876110

End: 1877228

Strand: Reverse

Name: yvbX [H]

Synonym: OTT_1842

Alternate gene names: 189184749

Gene position: 1877228-1876110 (Counterclockwise)

Preceding gene: 189184754

Following gene: 189184747

Centisome position: 93.44

GC content: 30.47

Gene sequence:

>1119_bases
ATGAAAAAGATATTTTATACTACAGCTAAATTAGATAAGCGTGCTATAGATAATTTACATACATATATCAATCATATTGA
TATTCTTGCTCCTCAATGCTATTTCCTGCAAGGTGACGGTCTAATCTCTGGTAAACCAGATAGTGCTATTGTAGATGCTG
CATCAAAACATAGTGTTCCGATAATGCCATTGATTATCAACAAAGACTTTAATCAAGAAGATTTTCATGCATTTTTGCAA
GATTCAGAAAAGCAAAAATTAGCAATAGAACAAATGATAAGACTTTGTCAGGATAACAATTATTACGGGATGCAGTTTGA
TTTTGAAAACATACTAGCATCTGATAAAGATCAGTATACAAATTTTTATAAAAAAACAGCTCAAGCCTTTCATGAATCTA
AACTAGCAATTAGTATTGCTGTTATACCAAAATTATATGATGATTATACTAACAAAAGCGCATATCAACAGTGGGGGTTT
AACAACTGGTGCGGTGTATATGATATAAAAGCACTAGCGGAAGCAAGTGATTTTATATCCCTAATGACATATGATCAACA
CACTCGCAATACTCCTGCAGGCCCAATTGCAGGATTGCCATGGGTAGAACAGTTATTATCAGTTTCCCTGAAGTTTATAG
AGCCTGAGAAATTGTCATTAGGTATACCATTTTATTCAGGTTACTGGACTAATGATATTATTAAAAATAATCCAGTCTTA
TTAAGAAAAGGTCTAAATTATGACCAAGTTAAAGAGCTTATTAGCTCTAAAGATATTAGCATAACTTGGAATAATAAACA
AAAGGTACACTATGGAGTCTTCATGGAGAATTTTTGTAATAATTATCTATTTATAGAAGACTATTATTCTTTAAAAGAAA
AGCTAAATCTTGTTCATAAACTTAATTTACATGGGTTTTCTGCTTGGAGGCTTGGATTTGAAGATACAAGATTTTATAAT
CTATTAAAAAATAATGTTGTTGATCATAAGCAAAGCATAGTATTTCCAGCTATATTGATGCTTGTATTATTTATATTGTT
ATTTATTCTGCTTCATATTAGACCTCTTTGGAAACTGGTTAAGGTAGTTCAAAATTATAAATGCCAGAGATCAAATTAA

Upstream 100 bases:

>100_bases
ATAGTATATGTCATACTAATTACTTTTTTATTATATTTATTATTATAATTGTTTTATAGTAGTTTGACTATAATATTAAA
CAGCATAAATATAAAACATC

Downstream 100 bases:

>100_bases
ATCTAAGACCGAATCTTTTACGTCTATTTCGATATTTGTCAGCAATAATTTTGAACCGTTTTAGCATACCAATAACGTTT
TCATTCACAACTCTTGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKKIFYTTAKLDKRAIDNLHTYINHIDILAPQCYFLQGDGLISGKPDSAIVDAASKHSVPIMPLIINKDFNQEDFHAFLQ
DSEKQKLAIEQMIRLCQDNNYYGMQFDFENILASDKDQYTNFYKKTAQAFHESKLAISIAVIPKLYDDYTNKSAYQQWGF
NNWCGVYDIKALAEASDFISLMTYDQHTRNTPAGPIAGLPWVEQLLSVSLKFIEPEKLSLGIPFYSGYWTNDIIKNNPVL
LRKGLNYDQVKELISSKDISITWNNKQKVHYGVFMENFCNNYLFIEDYYSLKEKLNLVHKLNLHGFSAWRLGFEDTRFYN
LLKNNVVDHKQSIVFPAILMLVLFILLFILLHIRPLWKLVKVVQNYKCQRSN

Sequences:

>Translated_372_residues
MKKIFYTTAKLDKRAIDNLHTYINHIDILAPQCYFLQGDGLISGKPDSAIVDAASKHSVPIMPLIINKDFNQEDFHAFLQ
DSEKQKLAIEQMIRLCQDNNYYGMQFDFENILASDKDQYTNFYKKTAQAFHESKLAISIAVIPKLYDDYTNKSAYQQWGF
NNWCGVYDIKALAEASDFISLMTYDQHTRNTPAGPIAGLPWVEQLLSVSLKFIEPEKLSLGIPFYSGYWTNDIIKNNPVL
LRKGLNYDQVKELISSKDISITWNNKQKVHYGVFMENFCNNYLFIEDYYSLKEKLNLVHKLNLHGFSAWRLGFEDTRFYN
LLKNNVVDHKQSIVFPAILMLVLFILLFILLHIRPLWKLVKVVQNYKCQRSN
>Mature_372_residues
MKKIFYTTAKLDKRAIDNLHTYINHIDILAPQCYFLQGDGLISGKPDSAIVDAASKHSVPIMPLIINKDFNQEDFHAFLQ
DSEKQKLAIEQMIRLCQDNNYYGMQFDFENILASDKDQYTNFYKKTAQAFHESKLAISIAVIPKLYDDYTNKSAYQQWGF
NNWCGVYDIKALAEASDFISLMTYDQHTRNTPAGPIAGLPWVEQLLSVSLKFIEPEKLSLGIPFYSGYWTNDIIKNNPVL
LRKGLNYDQVKELISSKDISITWNNKQKVHYGVFMENFCNNYLFIEDYYSLKEKLNLVHKLNLHGFSAWRLGFEDTRFYN
LLKNNVVDHKQSIVFPAILMLVLFILLFILLHIRPLWKLVKVVQNYKCQRSN

Specific function: Unknown

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 18 family [H]

Homologues:

Organism=Homo sapiens, GI218083215, Length=288, Percent_Identity=24.3055555555556, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI218083182, Length=288, Percent_Identity=24.3055555555556, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI218083142, Length=288, Percent_Identity=24.3055555555556, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI218083233, Length=288, Percent_Identity=24.3055555555556, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00704 Glyco_hydro_18 [H]

EC number: NA

Molecular weight: Translated: 43320; Mature: 43320

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFYTTAKLDKRAIDNLHTYINHIDILAPQCYFLQGDGLISGKPDSAIVDAASKHSVP
CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCHHHHCCCCCCCCC
IMPLIINKDFNQEDFHAFLQDSEKQKLAIEQMIRLCQDNNYYGMQFDFENILASDKDQYT
EEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCHHHHH
NFYKKTAQAFHESKLAISIAVIPKLYDDYTNKSAYQQWGFNNWCGVYDIKALAEASDFIS
HHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LMTYDQHTRNTPAGPIAGLPWVEQLLSVSLKFIEPEKLSLGIPFYSGYWTNDIIKNNPVL
HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCEEECCCCCCCCCCCCHHCCCCEE
LRKGLNYDQVKELISSKDISITWNNKQKVHYGVFMENFCNNYLFIEDYYSLKEKLNLVHK
EECCCCHHHHHHHHCCCCEEEEECCCCEEEEHHHHHHHCCCEEEEHHHHHHHHHHHHHHH
LNLHGFSAWRLGFEDTRFYNLLKNNVVDHKQSIVFPAILMLVLFILLFILLHIRPLWKLV
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVVQNYKCQRSN
HHHHCCCCCCCC
>Mature Secondary Structure
MKKIFYTTAKLDKRAIDNLHTYINHIDILAPQCYFLQGDGLISGKPDSAIVDAASKHSVP
CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEECCCCCHHHHCCCCCCCCC
IMPLIINKDFNQEDFHAFLQDSEKQKLAIEQMIRLCQDNNYYGMQFDFENILASDKDQYT
EEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCHHHHH
NFYKKTAQAFHESKLAISIAVIPKLYDDYTNKSAYQQWGFNNWCGVYDIKALAEASDFIS
HHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LMTYDQHTRNTPAGPIAGLPWVEQLLSVSLKFIEPEKLSLGIPFYSGYWTNDIIKNNPVL
HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCEEECCCCCCCCCCCCHHCCCCEE
LRKGLNYDQVKELISSKDISITWNNKQKVHYGVFMENFCNNYLFIEDYYSLKEKLNLVHK
EECCCCHHHHHHHHCCCCEEEEECCCCEEEEHHHHHHHCCCEEEEHHHHHHHHHHHHHHH
LNLHGFSAWRLGFEDTRFYNLLKNNVVDHKQSIVFPAILMLVLFILLFILLHIRPLWKLV
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVVQNYKCQRSN
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]