| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is rpoB [H]
Identifier: 189184701
GI number: 189184701
Start: 1823774
End: 1827898
Strand: Reverse
Name: rpoB [H]
Synonym: OTT_1794
Alternate gene names: 189184701
Gene position: 1827898-1823774 (Counterclockwise)
Preceding gene: 189184702
Following gene: 189184700
Centisome position: 90.99
GC content: 33.45
Gene sequence:
>4125_bases ATGCAATACTTATTATCTAAGAAACGTATTAGAAAAAATTTTGGTAAAATAAATTTGGTGTCTTCGATACCAAATCTTAT TGAAGTGCAAAAAAATTCTTATAATAAAGAATTTTTGCAGCTAGGAGTGCCTGTAGATTGCCGTGAAAACAAGGGATTGC AAGGGGTATTAAATTCTATTTTTCCTATTCATGATTTAGATGGAAGTGCAATATTAGAGTTTGTAAGGTATGATTTTGAT GAGCCTAAATATGATGTTGAGGAATGTATTCAAAGGGGGCTGAGTTATACTGCTGCTTTAAAAATTACTTTAAGTCTTAT TGTATTAGATGATAGTGATAAAAGCGATTCTAAAGAAATCAAGGGTATAAAAGAGCAAGCAGTTTATTTTGGAGATATTC CATTAATGACTGCTAATGGTACTTTTATTATTAATGGTACTGAGAGAGTAGTAGTATCACAGATGCATAGATCTCCAGGA GTTTTCTTTGATCACGATGATGGGAAAACACATTCTACTGGTAAATTAATATATTCAGCAAGAGTTATTCCTTATCGTGG TTCATGGTTAGATTTTGAATTTGATGCTAAAGATTTATTATATTTTAGAATTGATCGCAAAAGAAAGCTTTATGTTACTA CTTTGCTTATGGCTTTAGGTATGTCATCACATGACATACTAAATTTTTATTATGAATCTGCAGCTTACAAAAAAAGTGAG AATGGGTGGATTGTTGACTTTTTACCTGAATTAGTTAGTACTAAGCATTTGGCTTATGATTTAATTGATGCACAGACTGG TAAGGTATTATTAAATGCAGGTCAAAAGATTACAGTTAGGATAGCAAAAATGCTTGCTGATAAAGGAGTCAAGCAAATAT TAGTTAAGAATGATAGTTTGGTTGGGAAATTGTTAGCTGAAGATTTAGTTAATAATCAAACTGGTGAGGTATTATTAGGT GTAGGAGAAGAAATTACTAATGATATCCTAACAATAGTAAATGATTTGCAAATTACGACTGTTAGGGTTTTAGCAGTAGG TGGGCAATGTGGCCCATATGTGCGTAATACTTTGTTTCTAGATAAAAATAAGGATCAAAAATCATCATTAGTGGAGATAT TTCGAGTATTGAAGCCTGGTGAAATGGCTACAACTGCAGCTAGTCGTGGATTACTTGATAGTTTACTGTTTGATAATAAT AGATATGATCTTTCTGAAGTTGGAAGAATTAAGATTAACTCTAGGCTGAATTTGGATGTAGATTTAAAAAATACATGTAT AACTGTAGAGGATATAAAAAAGATAATTAAGCTTTTGGTTGACATTAAAGATGGTAAAGCTTTAGTAGATGATATTGATC ATTTAGGTAATCGTAGAGTTAGGTCAGTAGGTGAGTTAGTTGAAAATCAATTTAGAACTGGGTTGGTTAGAATTGCAAAA TTTATTGTAGAGAGAATAGGCAGTGTTGAGATTGATGCTGTTGTGCCTAACGATTTAGTTAATGCTAAATTATTGACATC TGTAATAAAAGAATTTTTTGGAACTTCTCAATTATCTCAGTTTATGGATCAGACAAATGCTTTATCGCAGATAACTCATA TAAGAAGATTATCTGCGCTTGGGCCAGGCGGATTGAATCGTGATAGAGCTGCTTTAGAAGTTAGGGATGTACATCCAACT CATTATGGTCGTATTTGTCCGATTGAAACTCCAGAAGGTCAAAATATTGGATTAATTAATTCTTTAGCTATTTTTGCTAA AATTAATAGGTATGGATTTATAGAAAGTCCTTATCGCAGGGTTATCAATCGACGTGTTACAGATGAAGTAGTATATCTTT CTGCGCTTGAGGAAGGAAGATATAAAATAGCTCAAGCTGATACTTCTTTATGTACTAATGACTGTCTTATTGATGGATTA GTTAGTTGTCGCTATGATGGTAATTTTGTTATGGTGCCTGCTCAAGAAGTAGATTTTATTGATTTAACTCCTATGCAAGT TGTATCAGTTGCTGCTTCTATGATTCCATTTCTAGAAAATGATGATGCTAATCGTGCGTTGATGGGAGCTAATATGCAAA GGCAGGCTGTGCCATTGTTAAAGAGTCAAGCTCCTTTAGTTGGGACTGGAATTGAATCTGTTGTTGCTCATGATTCTGGG ACAGTTGTTGCTGCTTTACATGATGGAATTGTGGAACAAGTAGATTCGACTAGAATAGTTGTTAAAACTTCAGTTAAAAA GGATGCTGGAGCTCCTGGTGTTGATATATATAATCTTAAAAAATTTCAGAGATCAAACTATAATACTTGTATTAATCAAA AGGTATTAGTAAATGTTGGAGACATAGTAAAAAAAGGTGATGTTATTGCTGATGGGGTAGCTACTAATAAAGGAGAGATA GCTTTAGGGCGTAATGTTTTAGTAGCATTTATTGCCTGGAATGGGTATACTTTTGAGGATTCTATATTAGTTTCTGAAAG AATTGTTAAAGAGGATATATATACGTCAATTCATATTGAAGAGTTAGAGCTTGTTGCTAGAGATACGCGTTTAGGTCCTG AAGAAATTACTAGAGATATTCCTAATGTTAATGACGAAAGTTTGCGTCATTTAGATGAGGTTGGTATTGTAAATATTGGA GCTAAAGTACGAACTGGTGATATTTTAGTTGGTAAGGTAACACCAAAAAGCGAGTCACCAGTGACTCCAGAGGAGAAGTT ATTAAGAGCTATATTTGGTGAAAAAGCTTCTGAAGTAAAGGATTCGTCGCTGTATGTTCCTCCTGGAATTACTGGAACTG TAATTGATGTACGAGTTTTTTCACGTCGTGGTATAGATAAAGATGAGAGAACTTTAGCAATTGAGAAGCAAAAAATTAGA AAATTAGTCAAAGATTATGAGGATGAGTTAGCAGTTATTCAACATTTTACTATTGTTAGGGTAAAGGAGCTATTAGTAGG GCAAGTAGCGGCTTGTAGTTTAGATAGCATTATAATTGGGGATAAGCTTGATGAAGCTATGCTGAATAAGTTAACTAACG AGCAATTATTGAAATTGAAAGCAGATAATAGCAGTATCATGGCTGAGATTTCAGAAATCAAGTGTCATTATGAAACTACT CGTGCTCAATTAACGAGTCAACTTAATAGTAAAATAGAGAAAATTCAATGTGGTGATGATTTACCTCAAGGAGCTTTAAG GGTTGTTAAAGTTTTCATTGCTATTAAGCATAGGTTACAGCCTGGAGATAAGATGGCCGGGAGGCATGGTAATAAAGGTG TAGTTTCTAAAGTAGTGCCTGAGGAAGATATGCCATTTCTTGAAGATGGTACCGTTGTTGATATAGTATTAAATCCGTTA GGGTTACCTGCTAGAATGAATGTTGGACAAATCTTAGAGACTCATTTAGGTTGGGCTGGAGTGAATTTAGGACGGAAGAT TGGAAAGATGGTTGATGATTATTATTTTGGTAATAATCAATGTACTGATGAAATTAGAAAATTTGTAAAAAAGATATATG CAAATAATAGTATTGCTGATACTATTGATCAAGTAAATGATCAACAATTAATTGAGATATGTCAAGAGTTGCGTCAAGGA ATATATTTTTCGACTCCAGTATTTGATGGAGCAAAAATTGCAGATATAAAGCAAATGCTTGAGTTAGCTGATGTAGATAA GTCTGGACAAGTGAGGCTTATTGATGGTAGGACTGGAGAATATTTTGATAGAAGATGTACTGTAGGTTATCAATATTTAT TGAAGTTGCATCATTTGGTTGATGAAAAAATACATGCTCGTTCTATTGGACCATATAGTCTCGTAACACAGCAACCTTTA GGAGGTAAATCTCACTTTGGAGGTCAAAGATTTGGAGAAATGGAGTGTTGGGCACTAGAAGCATATGGTGCAGCTTATAC ACTTCAGGAGCTTTTGACAACTAAATCTGATTCTGTAGAAGGTAGAATTAAAATGTATCAAGCAATAATACGTGGTAACA ACAATTTTGTATCTGGTGTTCCTGAGTCGTTAAATGTTATGATTAAAGAATTAAGGTCTCTATGTCTTAATATTCAGTTA GAGGAAAATGATGAAGAAGATGAGAATGAAAATGAGAATTGTTAA
Upstream 100 bases:
>100_bases TAACAGAAAGTGCAGGATGTAGAATTAGTTTTAAATCTTTGGTTGTATAAAAGAAATCTAGGCTTATACTTTATAGCTAT TTAGGAAAATAATATTATAT
Downstream 100 bases:
>100_bases TTTTATCTTTTAGAGTAATATTTGTTATTGAGTTATTTACTTAAAGCTCTATAAAAATTCATTAGTTCAATGAATTAAAA AAAAGTTTAAGGTTATTTTT
Product: DNA-directed RNA polymerase subunit beta
Products: NA
Alternate protein names: RNAP subunit beta; RNA polymerase subunit beta; Transcriptase subunit beta [H]
Number of amino acids: Translated: 1374; Mature: 1374
Protein sequence:
>1374_residues MQYLLSKKRIRKNFGKINLVSSIPNLIEVQKNSYNKEFLQLGVPVDCRENKGLQGVLNSIFPIHDLDGSAILEFVRYDFD EPKYDVEECIQRGLSYTAALKITLSLIVLDDSDKSDSKEIKGIKEQAVYFGDIPLMTANGTFIINGTERVVVSQMHRSPG VFFDHDDGKTHSTGKLIYSARVIPYRGSWLDFEFDAKDLLYFRIDRKRKLYVTTLLMALGMSSHDILNFYYESAAYKKSE NGWIVDFLPELVSTKHLAYDLIDAQTGKVLLNAGQKITVRIAKMLADKGVKQILVKNDSLVGKLLAEDLVNNQTGEVLLG VGEEITNDILTIVNDLQITTVRVLAVGGQCGPYVRNTLFLDKNKDQKSSLVEIFRVLKPGEMATTAASRGLLDSLLFDNN RYDLSEVGRIKINSRLNLDVDLKNTCITVEDIKKIIKLLVDIKDGKALVDDIDHLGNRRVRSVGELVENQFRTGLVRIAK FIVERIGSVEIDAVVPNDLVNAKLLTSVIKEFFGTSQLSQFMDQTNALSQITHIRRLSALGPGGLNRDRAALEVRDVHPT HYGRICPIETPEGQNIGLINSLAIFAKINRYGFIESPYRRVINRRVTDEVVYLSALEEGRYKIAQADTSLCTNDCLIDGL VSCRYDGNFVMVPAQEVDFIDLTPMQVVSVAASMIPFLENDDANRALMGANMQRQAVPLLKSQAPLVGTGIESVVAHDSG TVVAALHDGIVEQVDSTRIVVKTSVKKDAGAPGVDIYNLKKFQRSNYNTCINQKVLVNVGDIVKKGDVIADGVATNKGEI ALGRNVLVAFIAWNGYTFEDSILVSERIVKEDIYTSIHIEELELVARDTRLGPEEITRDIPNVNDESLRHLDEVGIVNIG AKVRTGDILVGKVTPKSESPVTPEEKLLRAIFGEKASEVKDSSLYVPPGITGTVIDVRVFSRRGIDKDERTLAIEKQKIR KLVKDYEDELAVIQHFTIVRVKELLVGQVAACSLDSIIIGDKLDEAMLNKLTNEQLLKLKADNSSIMAEISEIKCHYETT RAQLTSQLNSKIEKIQCGDDLPQGALRVVKVFIAIKHRLQPGDKMAGRHGNKGVVSKVVPEEDMPFLEDGTVVDIVLNPL GLPARMNVGQILETHLGWAGVNLGRKIGKMVDDYYFGNNQCTDEIRKFVKKIYANNSIADTIDQVNDQQLIEICQELRQG IYFSTPVFDGAKIADIKQMLELADVDKSGQVRLIDGRTGEYFDRRCTVGYQYLLKLHHLVDEKIHARSIGPYSLVTQQPL GGKSHFGGQRFGEMECWALEAYGAAYTLQELLTTKSDSVEGRIKMYQAIIRGNNNFVSGVPESLNVMIKELRSLCLNIQL EENDEEDENENENC
Sequences:
>Translated_1374_residues MQYLLSKKRIRKNFGKINLVSSIPNLIEVQKNSYNKEFLQLGVPVDCRENKGLQGVLNSIFPIHDLDGSAILEFVRYDFD EPKYDVEECIQRGLSYTAALKITLSLIVLDDSDKSDSKEIKGIKEQAVYFGDIPLMTANGTFIINGTERVVVSQMHRSPG VFFDHDDGKTHSTGKLIYSARVIPYRGSWLDFEFDAKDLLYFRIDRKRKLYVTTLLMALGMSSHDILNFYYESAAYKKSE NGWIVDFLPELVSTKHLAYDLIDAQTGKVLLNAGQKITVRIAKMLADKGVKQILVKNDSLVGKLLAEDLVNNQTGEVLLG VGEEITNDILTIVNDLQITTVRVLAVGGQCGPYVRNTLFLDKNKDQKSSLVEIFRVLKPGEMATTAASRGLLDSLLFDNN RYDLSEVGRIKINSRLNLDVDLKNTCITVEDIKKIIKLLVDIKDGKALVDDIDHLGNRRVRSVGELVENQFRTGLVRIAK FIVERIGSVEIDAVVPNDLVNAKLLTSVIKEFFGTSQLSQFMDQTNALSQITHIRRLSALGPGGLNRDRAALEVRDVHPT HYGRICPIETPEGQNIGLINSLAIFAKINRYGFIESPYRRVINRRVTDEVVYLSALEEGRYKIAQADTSLCTNDCLIDGL VSCRYDGNFVMVPAQEVDFIDLTPMQVVSVAASMIPFLENDDANRALMGANMQRQAVPLLKSQAPLVGTGIESVVAHDSG TVVAALHDGIVEQVDSTRIVVKTSVKKDAGAPGVDIYNLKKFQRSNYNTCINQKVLVNVGDIVKKGDVIADGVATNKGEI ALGRNVLVAFIAWNGYTFEDSILVSERIVKEDIYTSIHIEELELVARDTRLGPEEITRDIPNVNDESLRHLDEVGIVNIG AKVRTGDILVGKVTPKSESPVTPEEKLLRAIFGEKASEVKDSSLYVPPGITGTVIDVRVFSRRGIDKDERTLAIEKQKIR KLVKDYEDELAVIQHFTIVRVKELLVGQVAACSLDSIIIGDKLDEAMLNKLTNEQLLKLKADNSSIMAEISEIKCHYETT RAQLTSQLNSKIEKIQCGDDLPQGALRVVKVFIAIKHRLQPGDKMAGRHGNKGVVSKVVPEEDMPFLEDGTVVDIVLNPL GLPARMNVGQILETHLGWAGVNLGRKIGKMVDDYYFGNNQCTDEIRKFVKKIYANNSIADTIDQVNDQQLIEICQELRQG IYFSTPVFDGAKIADIKQMLELADVDKSGQVRLIDGRTGEYFDRRCTVGYQYLLKLHHLVDEKIHARSIGPYSLVTQQPL GGKSHFGGQRFGEMECWALEAYGAAYTLQELLTTKSDSVEGRIKMYQAIIRGNNNFVSGVPESLNVMIKELRSLCLNIQL EENDEEDENENENC >Mature_1374_residues MQYLLSKKRIRKNFGKINLVSSIPNLIEVQKNSYNKEFLQLGVPVDCRENKGLQGVLNSIFPIHDLDGSAILEFVRYDFD EPKYDVEECIQRGLSYTAALKITLSLIVLDDSDKSDSKEIKGIKEQAVYFGDIPLMTANGTFIINGTERVVVSQMHRSPG VFFDHDDGKTHSTGKLIYSARVIPYRGSWLDFEFDAKDLLYFRIDRKRKLYVTTLLMALGMSSHDILNFYYESAAYKKSE NGWIVDFLPELVSTKHLAYDLIDAQTGKVLLNAGQKITVRIAKMLADKGVKQILVKNDSLVGKLLAEDLVNNQTGEVLLG VGEEITNDILTIVNDLQITTVRVLAVGGQCGPYVRNTLFLDKNKDQKSSLVEIFRVLKPGEMATTAASRGLLDSLLFDNN RYDLSEVGRIKINSRLNLDVDLKNTCITVEDIKKIIKLLVDIKDGKALVDDIDHLGNRRVRSVGELVENQFRTGLVRIAK FIVERIGSVEIDAVVPNDLVNAKLLTSVIKEFFGTSQLSQFMDQTNALSQITHIRRLSALGPGGLNRDRAALEVRDVHPT HYGRICPIETPEGQNIGLINSLAIFAKINRYGFIESPYRRVINRRVTDEVVYLSALEEGRYKIAQADTSLCTNDCLIDGL VSCRYDGNFVMVPAQEVDFIDLTPMQVVSVAASMIPFLENDDANRALMGANMQRQAVPLLKSQAPLVGTGIESVVAHDSG TVVAALHDGIVEQVDSTRIVVKTSVKKDAGAPGVDIYNLKKFQRSNYNTCINQKVLVNVGDIVKKGDVIADGVATNKGEI ALGRNVLVAFIAWNGYTFEDSILVSERIVKEDIYTSIHIEELELVARDTRLGPEEITRDIPNVNDESLRHLDEVGIVNIG AKVRTGDILVGKVTPKSESPVTPEEKLLRAIFGEKASEVKDSSLYVPPGITGTVIDVRVFSRRGIDKDERTLAIEKQKIR KLVKDYEDELAVIQHFTIVRVKELLVGQVAACSLDSIIIGDKLDEAMLNKLTNEQLLKLKADNSSIMAEISEIKCHYETT RAQLTSQLNSKIEKIQCGDDLPQGALRVVKVFIAIKHRLQPGDKMAGRHGNKGVVSKVVPEEDMPFLEDGTVVDIVLNPL GLPARMNVGQILETHLGWAGVNLGRKIGKMVDDYYFGNNQCTDEIRKFVKKIYANNSIADTIDQVNDQQLIEICQELRQG IYFSTPVFDGAKIADIKQMLELADVDKSGQVRLIDGRTGEYFDRRCTVGYQYLLKLHHLVDEKIHARSIGPYSLVTQQPL GGKSHFGGQRFGEMECWALEAYGAAYTLQELLTTKSDSVEGRIKMYQAIIRGNNNFVSGVPESLNVMIKELRSLCLNIQL EENDEEDENENENC
Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates [H]
COG id: COG0085
COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RNA polymerase beta chain family [H]
Homologues:
Organism=Homo sapiens, GI238908505, Length=272, Percent_Identity=31.6176470588235, Blast_Score=129, Evalue=2e-29, Organism=Homo sapiens, GI238908503, Length=272, Percent_Identity=31.6176470588235, Blast_Score=129, Evalue=3e-29, Organism=Homo sapiens, GI33469941, Length=273, Percent_Identity=29.3040293040293, Blast_Score=112, Evalue=2e-24, Organism=Homo sapiens, GI212286172, Length=273, Percent_Identity=29.3040293040293, Blast_Score=112, Evalue=2e-24, Organism=Homo sapiens, GI4505941, Length=241, Percent_Identity=30.2904564315353, Blast_Score=108, Evalue=3e-23, Organism=Escherichia coli, GI1790419, Length=1364, Percent_Identity=52.0527859237537, Blast_Score=1430, Evalue=0.0, Organism=Caenorhabditis elegans, GI17552304, Length=250, Percent_Identity=28.8, Blast_Score=103, Evalue=4e-22, Organism=Caenorhabditis elegans, GI25144348, Length=250, Percent_Identity=28.8, Blast_Score=87, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6324781, Length=253, Percent_Identity=31.6205533596838, Blast_Score=117, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6325267, Length=258, Percent_Identity=30.2325581395349, Blast_Score=107, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6324725, Length=111, Percent_Identity=37.8378378378378, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI17647877, Length=523, Percent_Identity=24.6653919694073, Blast_Score=122, Evalue=2e-27, Organism=Drosophila melanogaster, GI17136444, Length=251, Percent_Identity=28.2868525896414, Blast_Score=104, Evalue=6e-22,
Paralogues:
None
Copy number: 4233 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010243 - InterPro: IPR019462 - InterPro: IPR015712 - InterPro: IPR007120 - InterPro: IPR007121 - InterPro: IPR007644 - InterPro: IPR007642 - InterPro: IPR007645 - InterPro: IPR007641 - InterPro: IPR014724 [H]
Pfam domain/function: PF04563 RNA_pol_Rpb2_1; PF04561 RNA_pol_Rpb2_2; PF04565 RNA_pol_Rpb2_3; PF10385 RNA_pol_Rpb2_45; PF00562 RNA_pol_Rpb2_6; PF04560 RNA_pol_Rpb2_7 [H]
EC number: =2.7.7.6 [H]
Molecular weight: Translated: 153124; Mature: 153124
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS01166 RNA_POL_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYLLSKKRIRKNFGKINLVSSIPNLIEVQKNSYNKEFLQLGVPVDCRENKGLQGVLNSI CCHHHHHHHHHHHCCCEEEHHHCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHCC FPIHDLDGSAILEFVRYDFDEPKYDVEECIQRGLSYTAALKITLSLIVLDDSDKSDSKEI CCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCHHHH KGIKEQAVYFGDIPLMTANGTFIINGTERVVVSQMHRSPGVFFDHDDGKTHSTGKLIYSA CCHHHHCEEECCEEEEEECCEEEECCCHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEE RVIPYRGSWLDFEFDAKDLLYFRIDRKRKLYVTTLLMALGMSSHDILNFYYESAAYKKSE EEEEECCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC NGWIVDFLPELVSTKHLAYDLIDAQTGKVLLNAGQKITVRIAKMLADKGVKQILVKNDSL CCEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCHH VGKLLAEDLVNNQTGEVLLGVGEEITNDILTIVNDLQITTVRVLAVGGQCGPYVRNTLFL HHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHEEEE DKNKDQKSSLVEIFRVLKPGEMATTAASRGLLDSLLFDNNRYDLSEVGRIKINSRLNLDV ECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEE DLKNTCITVEDIKKIIKLLVDIKDGKALVDDIDHLGNRRVRSVGELVENQFRTGLVRIAK ECCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH FIVERIGSVEIDAVVPNDLVNAKLLTSVIKEFFGTSQLSQFMDQTNALSQITHIRRLSAL HHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC GPGGLNRDRAALEVRDVHPTHYGRICPIETPEGQNIGLINSLAIFAKINRYGFIESPYRR CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH VINRRVTDEVVYLSALEEGRYKIAQADTSLCTNDCLIDGLVSCRYDGNFVMVPAQEVDFI HHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHEEEECCCEEEEECCCCCEE DLTPMQVVSVAASMIPFLENDDANRALMGANMQRQAVPLLKSQAPLVGTGIESVVAHDSG ECCHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCEEECCHHHHHCCCCC TVVAALHDGIVEQVDSTRIVVKTSVKKDAGAPGVDIYNLKKFQRSNYNTCINQKVLVNVG CEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEHHHHHHHCCCCCHHCCCEEEEEHH DIVKKGDVIADGVATNKGEIALGRNVLVAFIAWNGYTFEDSILVSERIVKEDIYTSIHIE HHHHCCCEEECCCCCCCCCEEECCCEEEEEEEECCEEECCCHHHHHHHHHHHHHHHEEHH ELELVARDTRLGPEEITRDIPNVNDESLRHLDEVGIVNIGAKVRTGDILVGKVTPKSESP HHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCEEEECCEEEECCEEEEEECCCCCCC VTPEEKLLRAIFGEKASEVKDSSLYVPPGITGTVIDVRVFSRRGIDKDERTLAIEKQKIR CCHHHHHHHHHHCCHHHCCCCCCEEECCCCCEEEEEEEEHHHCCCCCCHHEEHHHHHHHH KLVKDYEDELAVIQHFTIVRVKELLVGQVAACSLDSIIIGDKLDEAMLNKLTNEQLLKLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCHHEEEEE ADNSSIMAEISEIKCHYETTRAQLTSQLNSKIEKIQCGDDLPQGALRVVKVFIAIKHRLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCC PGDKMAGRHGNKGVVSKVVPEEDMPFLEDGTVVDIVLNPLGLPARMNVGQILETHLGWAG CCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCHHH VNLGRKIGKMVDDYYFGNNQCTDEIRKFVKKIYANNSIADTIDQVNDQQLIEICQELRQG HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCC IYFSTPVFDGAKIADIKQMLELADVDKSGQVRLIDGRTGEYFDRRCTVGYQYLLKLHHLV CEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH DEKIHARSIGPYSLVTQQPLGGKSHFGGQRFGEMECWALEAYGAAYTLQELLTTKSDSVE HHHHHHCCCCCHHHEECCCCCCCCCCCCCCCCCCEEEEEEHHCHHHHHHHHHHCCCCCCH GRIKMYQAIIRGNNNFVSGVPESLNVMIKELRSLCLNIQLEENDEEDENENENC HHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MQYLLSKKRIRKNFGKINLVSSIPNLIEVQKNSYNKEFLQLGVPVDCRENKGLQGVLNSI CCHHHHHHHHHHHCCCEEEHHHCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHCC FPIHDLDGSAILEFVRYDFDEPKYDVEECIQRGLSYTAALKITLSLIVLDDSDKSDSKEI CCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCHHHH KGIKEQAVYFGDIPLMTANGTFIINGTERVVVSQMHRSPGVFFDHDDGKTHSTGKLIYSA CCHHHHCEEECCEEEEEECCEEEECCCHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEE RVIPYRGSWLDFEFDAKDLLYFRIDRKRKLYVTTLLMALGMSSHDILNFYYESAAYKKSE EEEEECCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC NGWIVDFLPELVSTKHLAYDLIDAQTGKVLLNAGQKITVRIAKMLADKGVKQILVKNDSL CCEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCHH VGKLLAEDLVNNQTGEVLLGVGEEITNDILTIVNDLQITTVRVLAVGGQCGPYVRNTLFL HHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHEEEE DKNKDQKSSLVEIFRVLKPGEMATTAASRGLLDSLLFDNNRYDLSEVGRIKINSRLNLDV ECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEE DLKNTCITVEDIKKIIKLLVDIKDGKALVDDIDHLGNRRVRSVGELVENQFRTGLVRIAK ECCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH FIVERIGSVEIDAVVPNDLVNAKLLTSVIKEFFGTSQLSQFMDQTNALSQITHIRRLSAL HHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC GPGGLNRDRAALEVRDVHPTHYGRICPIETPEGQNIGLINSLAIFAKINRYGFIESPYRR CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH VINRRVTDEVVYLSALEEGRYKIAQADTSLCTNDCLIDGLVSCRYDGNFVMVPAQEVDFI HHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHEEEECCCEEEEECCCCCEE DLTPMQVVSVAASMIPFLENDDANRALMGANMQRQAVPLLKSQAPLVGTGIESVVAHDSG ECCHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCEEECCHHHHHCCCCC TVVAALHDGIVEQVDSTRIVVKTSVKKDAGAPGVDIYNLKKFQRSNYNTCINQKVLVNVG CEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEHHHHHHHCCCCCHHCCCEEEEEHH DIVKKGDVIADGVATNKGEIALGRNVLVAFIAWNGYTFEDSILVSERIVKEDIYTSIHIE HHHHCCCEEECCCCCCCCCEEECCCEEEEEEEECCEEECCCHHHHHHHHHHHHHHHEEHH ELELVARDTRLGPEEITRDIPNVNDESLRHLDEVGIVNIGAKVRTGDILVGKVTPKSESP HHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCEEEECCEEEECCEEEEEECCCCCCC VTPEEKLLRAIFGEKASEVKDSSLYVPPGITGTVIDVRVFSRRGIDKDERTLAIEKQKIR CCHHHHHHHHHHCCHHHCCCCCCEEECCCCCEEEEEEEEHHHCCCCCCHHEEHHHHHHHH KLVKDYEDELAVIQHFTIVRVKELLVGQVAACSLDSIIIGDKLDEAMLNKLTNEQLLKLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCHHEEEEE ADNSSIMAEISEIKCHYETTRAQLTSQLNSKIEKIQCGDDLPQGALRVVKVFIAIKHRLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCC PGDKMAGRHGNKGVVSKVVPEEDMPFLEDGTVVDIVLNPLGLPARMNVGQILETHLGWAG CCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCHHH VNLGRKIGKMVDDYYFGNNQCTDEIRKFVKKIYANNSIADTIDQVNDQQLIEICQELRQG HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCC IYFSTPVFDGAKIADIKQMLELADVDKSGQVRLIDGRTGEYFDRRCTVGYQYLLKLHHLV CEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH DEKIHARSIGPYSLVTQQPLGGKSHFGGQRFGEMECWALEAYGAAYTLQELLTTKSDSVE HHHHHHCCCCCHHHEECCCCCCCCCCCCCCCCCCEEEEEEHHCHHHHHHHHHHCCCCCCH GRIKMYQAIIRGNNNFVSGVPESLNVMIKELRSLCLNIQLEENDEEDENENENC HHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA