Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is znuB [H]
Identifier: 189184644
GI number: 189184644
Start: 1757661
End: 1758449
Strand: Reverse
Name: znuB [H]
Synonym: OTT_1737
Alternate gene names: 189184644
Gene position: 1758449-1757661 (Counterclockwise)
Preceding gene: 189184645
Following gene: 189184643
Centisome position: 87.53
GC content: 28.9
Gene sequence:
>789_bases ATGACCATACTCATAATTAATTTAGTTATTGCAACAGTATTAATAAGTATACTGCTTGCATCACTTGGGTGCATAATATT ATGGCAGCGTTACACAAGTTTTAGCGATGGATTAGTACATTCTTGCGTATTAGCTGGAAGCATGGTATCTATATTTAATT TACCAACACTAATTTCTGCATTTTTAGTAGCACTAATATATTCTGGAGCAATTTTTTTTTTTAGTAACAATAATTACAAT AAATCAACAGTAGTTTTTATTGTTTCAAATGGTATGCTAGCTTTATCAGCTATTTTATCAACTATTGTTCCAGGTGCACC AACTGTTTCTAGCCTTTTGTTTGGTGGAGAATTATGGCTAATAAATTCAACTGACATAATAATTTTATTTATTTTAGTAT TAATAATAGGAGCGCTAATATATACAAATTTTAAGGCAATTATATTAATGTCTTTAAATAAAGAACTTGCTGTAGTGATT TTAGAAAGGCATCCTAGAGTTATCGAAATGATGTTTTTGGTTATTTTATCAACTACGATCATTGTTACTATAAAAATATT TGGTAGCTTGTTTCTAACTGCATGGCTTGTAATTCCTGCAGCAACTGCAAGAATAATTAGTAATTCTGCAGCTAAGATGA TAATTTACTCTAATCTGCTATCTGTAATGTTTAATCTTACTGGAATCGGTGTATCTGTATATCTTGATACTCCTACTACA GCAACAATGGTATTTACTAATTTCTTAGCTTTTGTTGTTATATTTATTATATTTAAAACTTCAGATTAG
Upstream 100 bases:
>100_bases TGCTGTAGTAGCTATTTATTTAAATATTCAAAAGAGAATAGAGCCTGCGTTGCTAATTTGATGGAGTTAGATTCTCAAAT AGGAATATATACTCATAATC
Downstream 100 bases:
>100_bases GATAATGAATGAGAAAAAAAAGAAGATGTAATAAAATTGGTATTAAGTTTGGAGATGTGGCAACTTGCAAGAGAAGCAAT TATATGAACTAAGAAATTAG
Product: zinc/manganese ABC transporter permease protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTILIINLVIATVLISILLASLGCIILWQRYTSFSDGLVHSCVLAGSMVSIFNLPTLISAFLVALIYSGAIFFFSNNNYN KSTVVFIVSNGMLALSAILSTIVPGAPTVSSLLFGGELWLINSTDIIILFILVLIIGALIYTNFKAIILMSLNKELAVVI LERHPRVIEMMFLVILSTTIIVTIKIFGSLFLTAWLVIPAATARIISNSAAKMIIYSNLLSVMFNLTGIGVSVYLDTPTT ATMVFTNFLAFVVIFIIFKTSD
Sequences:
>Translated_262_residues MTILIINLVIATVLISILLASLGCIILWQRYTSFSDGLVHSCVLAGSMVSIFNLPTLISAFLVALIYSGAIFFFSNNNYN KSTVVFIVSNGMLALSAILSTIVPGAPTVSSLLFGGELWLINSTDIIILFILVLIIGALIYTNFKAIILMSLNKELAVVI LERHPRVIEMMFLVILSTTIIVTIKIFGSLFLTAWLVIPAATARIISNSAAKMIIYSNLLSVMFNLTGIGVSVYLDTPTT ATMVFTNFLAFVVIFIIFKTSD >Mature_261_residues TILIINLVIATVLISILLASLGCIILWQRYTSFSDGLVHSCVLAGSMVSIFNLPTLISAFLVALIYSGAIFFFSNNNYNK STVVFIVSNGMLALSAILSTIVPGAPTVSSLLFGGELWLINSTDIIILFILVLIIGALIYTNFKAIILMSLNKELAVVIL ERHPRVIEMMFLVILSTTIIVTIKIFGSLFLTAWLVIPAATARIISNSAAKMIIYSNLLSVMFNLTGIGVSVYLDTPTTA TMVFTNFLAFVVIFIIFKTSD
Specific function: Involved in the high-affinity zinc uptake transport system [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=245, Percent_Identity=23.6734693877551, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 28505; Mature: 28374
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILIINLVIATVLISILLASLGCIILWQRYTSFSDGLVHSCVLAGSMVSIFNLPTLISA CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FLVALIYSGAIFFFSNNNYNKSTVVFIVSNGMLALSAILSTIVPGAPTVSSLLFGGELWL HHHHHHHCCEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHCCEEEE INSTDIIILFILVLIIGALIYTNFKAIILMSLNKELAVVILERHPRVIEMMFLVILSTTI ECCCHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHH IVTIKIFGSLFLTAWLVIPAATARIISNSAAKMIIYSNLLSVMFNLTGIGVSVYLDTPTT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCH ATMVFTNFLAFVVIFIIFKTSD HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TILIINLVIATVLISILLASLGCIILWQRYTSFSDGLVHSCVLAGSMVSIFNLPTLISA EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FLVALIYSGAIFFFSNNNYNKSTVVFIVSNGMLALSAILSTIVPGAPTVSSLLFGGELWL HHHHHHHCCEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHCCEEEE INSTDIIILFILVLIIGALIYTNFKAIILMSLNKELAVVILERHPRVIEMMFLVILSTTI ECCCHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHH IVTIKIFGSLFLTAWLVIPAATARIISNSAAKMIIYSNLLSVMFNLTGIGVSVYLDTPTT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCH ATMVFTNFLAFVVIFIIFKTSD HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]