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The map label for this gene is traH [H]

Identifier: 189184640

GI number: 189184640

Start: 1754757

End: 1755452

Strand: Reverse

Name: traH [H]

Synonym: OTT_1733

Alternate gene names: 189184640

Gene position: 1755452-1754757 (Counterclockwise)

Preceding gene: 189184641

Following gene: 189184639

Centisome position: 87.38

GC content: 36.64

Gene sequence:

>696_bases
ATGAGTGTTAATGTCACTAGATCTGGATCATATCAGGATCAAGCGGCTGGATATTATGCAGCTGGTGGATTATCTGCTCG
AACAAGCCAAACATCATTTCAGCCATTTGCTATAACTCCCCCATCTTTAAACATGAGCTGTAACGGTATTGACGCCTATC
TTGGTAGCTTCTCTGTTATTTCTGGAGAAGAATTAGTTCAACTAATGAAAAACATTGGTTCTCAAGCTAAAGTTTATGCA
TTTTCATTAGGATTAAAAACATTTGCTCCACAGATCGAAAATGCTCTTAAGGACTTACGTAATCTAGCAATGGAGATGAA
TCAATTTGCTAAAGGAGATTGTGAATTAACAAAAGCATTATTTGCTACAGCTTTACCAAGAAACTCTGCTATGAGAGAAG
CTGTTTGTCGTGATATACAGTCACAAAGCGGGTTTGATTATTTTGCTGCTGGTAAAAAATGTCGTAATGATTTAGCTCAA
AAACAAGCTCTGCGACAAGCACAAAATAAGGATTCAGAGCTAATGCTTGATGATTATAACATCTTCACTAAAGCAGCAGC
GAAGGTTGTAATACCATCAAATATGCGTGATTCAATCATGTCTATGACTGGTACTATCGTCGGTACATTTCAATGTTTAA
GAGTACTGTGTTATTATAAGCCTTTCAGAGTGTTAAATGTCGAGTATAGCTACTAA

Upstream 100 bases:

>100_bases
AGCATTAGAATCAGAGTTTATGTTATTGCAGCATTATTTTCGCTACAAGCTCCAGTATCACTAGCTTGGAATTTGGAATA
TCGAAGACGTATTTTAAGGA

Downstream 100 bases:

>100_bases
ATTGCTATATTTACGCGGATAAAAACGTGGTTTTTGATAGCGAAAGTTGCCTAAACCACTTGCAAGAATTTGCAGGTGAA
CCTGAAAAAAAGTTTCAGGT

Product: putative conjugative transfer protein TraH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSVNVTRSGSYQDQAAGYYAAGGLSARTSQTSFQPFAITPPSLNMSCNGIDAYLGSFSVISGEELVQLMKNIGSQAKVYA
FSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPRNSAMREAVCRDIQSQSGFDYFAAGKKCRNDLAQ
KQALRQAQNKDSELMLDDYNIFTKAAAKVVIPSNMRDSIMSMTGTIVGTFQCLRVLCYYKPFRVLNVEYSY

Sequences:

>Translated_231_residues
MSVNVTRSGSYQDQAAGYYAAGGLSARTSQTSFQPFAITPPSLNMSCNGIDAYLGSFSVISGEELVQLMKNIGSQAKVYA
FSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPRNSAMREAVCRDIQSQSGFDYFAAGKKCRNDLAQ
KQALRQAQNKDSELMLDDYNIFTKAAAKVVIPSNMRDSIMSMTGTIVGTFQCLRVLCYYKPFRVLNVEYSY
>Mature_230_residues
SVNVTRSGSYQDQAAGYYAAGGLSARTSQTSFQPFAITPPSLNMSCNGIDAYLGSFSVISGEELVQLMKNIGSQAKVYAF
SLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPRNSAMREAVCRDIQSQSGFDYFAAGKKCRNDLAQK
QALRQAQNKDSELMLDDYNIFTKAAAKVVIPSNMRDSIMSMTGTIVGTFQCLRVLCYYKPFRVLNVEYSY

Specific function: Involved in pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010927 [H]

Pfam domain/function: PF06122 TraH [H]

EC number: NA

Molecular weight: Translated: 25450; Mature: 25319

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNVTRSGSYQDQAAGYYAAGGLSARTSQTSFQPFAITPPSLNMSCNGIDAYLGSFSVI
CCEECCCCCCCCHHHCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCEE
SGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKAL
CHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FATALPRNSAMREAVCRDIQSQSGFDYFAAGKKCRNDLAQKQALRQAQNKDSELMLDDYN
HHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCHH
IFTKAAAKVVIPSNMRDSIMSMTGTIVGTFQCLRVLCYYKPFRVLNVEYSY
HHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC
>Mature Secondary Structure 
SVNVTRSGSYQDQAAGYYAAGGLSARTSQTSFQPFAITPPSLNMSCNGIDAYLGSFSVI
CEECCCCCCCCHHHCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCEE
SGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKAL
CHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FATALPRNSAMREAVCRDIQSQSGFDYFAAGKKCRNDLAQKQALRQAQNKDSELMLDDYN
HHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCHH
IFTKAAAKVVIPSNMRDSIMSMTGTIVGTFQCLRVLCYYKPFRVLNVEYSY
HHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817; 2656408 [H]