| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184538
Identifier: 189184538
GI number: 189184538
Start: 1661149
End: 1662918
Strand: Reverse
Name: 189184538
Synonym: OTT_1631
Alternate gene names: NA
Gene position: 1662918-1661149 (Counterclockwise)
Preceding gene: 189184544
Following gene: 189184537
Centisome position: 82.77
GC content: 32.15
Gene sequence:
>1770_bases ATGCATCGTAGGAGCAGTACGCAATTTAATATCCAGGCAATGAGTAGCATCCAATTATGTAAGATGCTTAAAGATAGAGA TGTATTATCCAAACCTATTATAACAGAGATTTACAATAGAGCTTTGTTTTTACTGCAAACTGAAGATGCAAGATACAATA AATTGCAGTTTGATGCCAGAGGCTTAGCAACAATTTTATATCAATTTGCAAAATTAAACTATGTTATAGGTTCTGAGTTT ATTGAAGCTTGGACAAATCAAGCTATAAACCTAATGGATGAGTTTAACTCTCAAGGGGTAACTAATTCTCTATGGGCATT TGGACGGCTAAAAATTCAGCCACAAGCTTCATTCATTGATGCTTGGACAAATCAAGCTATAAATCTAATGGATGAGTTTA ACTCTCAAGATTTATCTAATTCCATATGGGGATTTGGATGGTTAGAAATTCAGCCACAAGCTTCATTCATTGATGCTTGG ACAAATCAAGCTACTAAAACTATTGGTAAGTTTAACCCTCAGGAGTTAGCTAATTCCCTATGGGCATTAGGACGGTTAGA AATTCATCCACAAGCTTTATTCATTGATGCTTGGACAAATCAAGCTACTAAAACTATTGATCAGTTTAACCATCAAAATT TATCTAATTCCATATGGGCATTAGGACGGTTAGAAATTCAGCCACAAGCTTCATTCATTGAGGCTTGGACAAATCAAGCT ATAAATCTAATGGATGAGTTTAACTCTCAAGATTTATCTAATTCCATATGGGGATTTGGACGGCTAAAAATTCAGCCACA AGCTTCATTCATTGAAGCTTGGATACATCAAGCTACTAAAACTATTGATAAGTTTAATTCTCAAGATTTAGCTAATTCCC TATGGGCATTAGGACGGTTAGAAATTCATCCACAAGCTTCATTCATTGAAGCTTGGATACATCATGCTACTAAAATCATT GATAAGTTTAACCATCAAGAGCTAGCTAATTCTATTTATGGAATACTTACATTAAATGTTTTATGTAACTCTAAAATTAA AGTACCACAGCTATTTATTTCTGCTGTTAATCAAAATATTGAACTGTTTGATGAAAATATTGAGGATATTGGTCAAATTT TAAAAGCGTATTATTATTTTGGTAAACAAGGTGTAGGAATATTAACTTCACAAAATCGTCAACTTCTTGAAAAAAAGTTT AAAACCAAATTAACACCTTATCATACTTCAAATTTACACCTAAATGTTCTGGAGGTAGTCAAAAAAGTATTAGCACAACA TACTGTTAAAAGCGAGCATTATATTAAGCAGATTACTTCTAGTGTTGATATCTTTATTAAAGAGAAAAATACAGTAATTC AAGTAGATGGACCATACCATTTTGACGACAATAATGCTCTTAATTTTTCAACTAGGCTTAATACTGAATTATTGAAAAGT TATGGATACATAGTACATAGAATTCCATATTGGGTTTGGGATAAGTTAACTGACAAAGAAGAATATATATGTAAATTGAT ATGCACTGATGAATTTGTTTCTAAATCAGAGATGTTAGAGGAGATGTTCTATGATGCACAAGAGAATATACCAGAGCAAT CAACAAGCGAAATTTTACCTCATTCTGAATCACAGGTATCAGATGATGTATTTTATGATGCATACGAATATATTCCACAA GATCTATTAACACATGAATCTTTATCTCATTATGACATGCAAGCATTGGGTAACATAGATTTTCCTGATTTTGAGACACG TAGTTTGTAA
Upstream 100 bases:
>100_bases AAAATGGCATGATATATATTACTCAATTAATGTATATCATGCTTTTTATCAAAAGACGTATTTAGTATTACAAAGTCAAA CTATATAAGGAGCTTAGAAC
Downstream 100 bases:
>100_bases TACTTTTTACAAAAACTTAGCAAGCTTTTGATGCGAATGTATGCTAGAAAAATATGAGTTCTATATATAGCGGAAGGCAT AACTATAGTTACATCACAAT
Product: repeat-containing protein A_05
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MHRRSSTQFNIQAMSSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNKLQFDARGLATILYQFAKLNYVIGSEF IEAWTNQAINLMDEFNSQGVTNSLWAFGRLKIQPQASFIDAWTNQAINLMDEFNSQDLSNSIWGFGWLEIQPQASFIDAW TNQATKTIGKFNPQELANSLWALGRLEIHPQALFIDAWTNQATKTIDQFNHQNLSNSIWALGRLEIQPQASFIEAWTNQA INLMDEFNSQDLSNSIWGFGRLKIQPQASFIEAWIHQATKTIDKFNSQDLANSLWALGRLEIHPQASFIEAWIHHATKII DKFNHQELANSIYGILTLNVLCNSKIKVPQLFISAVNQNIELFDENIEDIGQILKAYYYFGKQGVGILTSQNRQLLEKKF KTKLTPYHTSNLHLNVLEVVKKVLAQHTVKSEHYIKQITSSVDIFIKEKNTVIQVDGPYHFDDNNALNFSTRLNTELLKS YGYIVHRIPYWVWDKLTDKEEYICKLICTDEFVSKSEMLEEMFYDAQENIPEQSTSEILPHSESQVSDDVFYDAYEYIPQ DLLTHESLSHYDMQALGNIDFPDFETRSL
Sequences:
>Translated_589_residues MHRRSSTQFNIQAMSSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNKLQFDARGLATILYQFAKLNYVIGSEF IEAWTNQAINLMDEFNSQGVTNSLWAFGRLKIQPQASFIDAWTNQAINLMDEFNSQDLSNSIWGFGWLEIQPQASFIDAW TNQATKTIGKFNPQELANSLWALGRLEIHPQALFIDAWTNQATKTIDQFNHQNLSNSIWALGRLEIQPQASFIEAWTNQA INLMDEFNSQDLSNSIWGFGRLKIQPQASFIEAWIHQATKTIDKFNSQDLANSLWALGRLEIHPQASFIEAWIHHATKII DKFNHQELANSIYGILTLNVLCNSKIKVPQLFISAVNQNIELFDENIEDIGQILKAYYYFGKQGVGILTSQNRQLLEKKF KTKLTPYHTSNLHLNVLEVVKKVLAQHTVKSEHYIKQITSSVDIFIKEKNTVIQVDGPYHFDDNNALNFSTRLNTELLKS YGYIVHRIPYWVWDKLTDKEEYICKLICTDEFVSKSEMLEEMFYDAQENIPEQSTSEILPHSESQVSDDVFYDAYEYIPQ DLLTHESLSHYDMQALGNIDFPDFETRSL >Mature_589_residues MHRRSSTQFNIQAMSSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNKLQFDARGLATILYQFAKLNYVIGSEF IEAWTNQAINLMDEFNSQGVTNSLWAFGRLKIQPQASFIDAWTNQAINLMDEFNSQDLSNSIWGFGWLEIQPQASFIDAW TNQATKTIGKFNPQELANSLWALGRLEIHPQALFIDAWTNQATKTIDQFNHQNLSNSIWALGRLEIQPQASFIEAWTNQA INLMDEFNSQDLSNSIWGFGRLKIQPQASFIEAWIHQATKTIDKFNSQDLANSLWALGRLEIHPQASFIEAWIHHATKII DKFNHQELANSIYGILTLNVLCNSKIKVPQLFISAVNQNIELFDENIEDIGQILKAYYYFGKQGVGILTSQNRQLLEKKF KTKLTPYHTSNLHLNVLEVVKKVLAQHTVKSEHYIKQITSSVDIFIKEKNTVIQVDGPYHFDDNNALNFSTRLNTELLKS YGYIVHRIPYWVWDKLTDKEEYICKLICTDEFVSKSEMLEEMFYDAQENIPEQSTSEILPHSESQVSDDVFYDAYEYIPQ DLLTHESLSHYDMQALGNIDFPDFETRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68109; Mature: 68109
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRRSSTQFNIQAMSSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNKLQFDAR CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCEEEEEEECCCCCCEEEECHH GLATILYQFAKLNYVIGSEFIEAWTNQAINLMDEFNSQGVTNSLWAFGRLKIQPQASFID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCEEEEECCCHHHHH AWTNQAINLMDEFNSQDLSNSIWGFGWLEIQPQASFIDAWTNQATKTIGKFNPQELANSL HHHHHHHHHHHHCCCCHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHH WALGRLEIHPQALFIDAWTNQATKTIDQFNHQNLSNSIWALGRLEIQPQASFIEAWTNQA HHHCCEEECCCEEEEECCCCHHHHHHHHHCCCCCCCHHEEEEEEEECCCHHHHHHHHHHH INLMDEFNSQDLSNSIWGFGRLKIQPQASFIEAWIHQATKTIDKFNSQDLANSLWALGRL HHHHHHCCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCE EIHPQASFIEAWIHHATKIIDKFNHQELANSIYGILTLNVLCNSKIKVPQLFISAVNQNI EECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCH ELFDENIEDIGQILKAYYYFGKQGVGILTSQNRQLLEKKFKTKLTPYHTSNLHLNVLEVV HHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCEEHHHHHH KKVLAQHTVKSEHYIKQITSSVDIFIKEKNTVIQVDGPYHFDDNNALNFSTRLNTELLKS HHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCEEECCCCEEEEHHHCCHHHHHH YGYIVHRIPYWVWDKLTDKEEYICKLICTDEFVSKSEMLEEMFYDAQENIPEQSTSEILP HCHHHHHCCHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC HSESQVSDDVFYDAYEYIPQDLLTHESLSHYDMQALGNIDFPDFETRSL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MHRRSSTQFNIQAMSSIQLCKMLKDRDVLSKPIITEIYNRALFLLQTEDARYNKLQFDAR CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCEEEEEEECCCCCCEEEECHH GLATILYQFAKLNYVIGSEFIEAWTNQAINLMDEFNSQGVTNSLWAFGRLKIQPQASFID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCEEEEECCCHHHHH AWTNQAINLMDEFNSQDLSNSIWGFGWLEIQPQASFIDAWTNQATKTIGKFNPQELANSL HHHHHHHHHHHHCCCCHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHH WALGRLEIHPQALFIDAWTNQATKTIDQFNHQNLSNSIWALGRLEIQPQASFIEAWTNQA HHHCCEEECCCEEEEECCCCHHHHHHHHHCCCCCCCHHEEEEEEEECCCHHHHHHHHHHH INLMDEFNSQDLSNSIWGFGRLKIQPQASFIEAWIHQATKTIDKFNSQDLANSLWALGRL HHHHHHCCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCE EIHPQASFIEAWIHHATKIIDKFNHQELANSIYGILTLNVLCNSKIKVPQLFISAVNQNI EECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCH ELFDENIEDIGQILKAYYYFGKQGVGILTSQNRQLLEKKFKTKLTPYHTSNLHLNVLEVV HHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCEEHHHHHH KKVLAQHTVKSEHYIKQITSSVDIFIKEKNTVIQVDGPYHFDDNNALNFSTRLNTELLKS HHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCEEECCCCEEEEHHHCCHHHHHH YGYIVHRIPYWVWDKLTDKEEYICKLICTDEFVSKSEMLEEMFYDAQENIPEQSTSEILP HCHHHHHCCHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC HSESQVSDDVFYDAYEYIPQDLLTHESLSHYDMQALGNIDFPDFETRSL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA