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The map label for this gene is virB10 [H]

Identifier: 189184476

GI number: 189184476

Start: 1596856

End: 1598385

Strand: Reverse

Name: virB10 [H]

Synonym: OTT_1569

Alternate gene names: 189184476

Gene position: 1598385-1596856 (Counterclockwise)

Preceding gene: 189184477

Following gene: 189184475

Centisome position: 79.56

GC content: 32.03

Gene sequence:

>1530_bases
ATGCAAAATATTAATAACGATTCTAATCAAGATACACAGGGCCAATGTGATCATTCTGAGGATTCTAAAGTAGTTGGACC
AGAAGTACATAATGAATTTTCAAAAGTTGCATCTAGTGCTAAAAGGAGTGTTTTATTAACGATAGTAATAGTAGTTATAT
CCATTGTAATACTATATTTCGTAATCTCTAGTATCTTTATTGACGAAAGTCCTAAAGAGGAAAGTATAGCTGTTCCAGTA
CCAGTTGATGTTATCAAGCCAAATATTGAATTATCCGGAGATATTGTTATACCAGAATTACCTACGATACCTACTCTGAT
AACTCCAGAATTGCCAGAAATAAAAGTACCAAATCAAGCGAAATTAAATGACTTGAATAACGATAACTCTAGTAAAGATG
AAGTGGTTCAGTCTAATAAACTGCCAAAAGAACCGAAGTTAATTAAGCCACCAGTTTTACCATTAACAGAACAAGGTGAG
TATAATAATGCTAAACAAGATGCAAAAATACCTTCATTAGACTTATCCGCTCAAACTAAAGATAGAGCTGCTCGTTTACA
GGAAAAAAGAACATCTACTAATATTGTGCTAATTAATAAATCTCCTCCTTCTCCAACAAGAGAAGAAATGGAGCAGATAC
GAAATTTTACTGATGCAGGAGAACTAAGATATTTATTGGGAAGAGGGACAGTAATTGATGCAGTAATTATAAGTGCAGTA
AACTCTGATTTTATTGGAGAGATAGTAGCTATGGTAAGTAAAGATGTTTACTCTCAAGAAGGAAAAACTGTCTTAATTCC
AAGAGGCTCAAAAATTTTTGGTTATCCTAGTGTATTAGATAATGCCGCTTATGGCAGAATGATGATTACTTGGTCAGAAG
TACAGATTGCAGGTAGTCAATATAAACTAAATTTATCTGCTCCAACTATTGATAGATTAGGCAAAATAGGGGTTGCAGGT
AAAGTTAATAATAAAAACTTAGCAAGAATTATGCATGCTGTTTTAGTATCAGCTGTTAATATAGGCGCAGCATTTACACT
CGATAAAGTAGTAGCGTTACAGCAACAGATGGCTAATACAACTAGTGGCCTCACTGGTACGTTAATTAAAAATGCGATGA
ATATTAACAATGATTCTGTAAAGAGTGATAGTCAAAAGATAACAGAGATTTGCGGTATGAGTCGTAGTCTTATAACTGAT
AAATCATCATCTGTATATACTACTATCAATAAAAAATGCATGGAAATTGAGACATCAATAATAGCAAATGTAGACGATAA
ACAAAAGCTATCATCTTTAATAAATACAATTATTAATATCTCAAATTCTACTGCTAACAATAGCAATAGTAATACTCAGA
AAGCAACTGATACTGCTTTAAACGATGTAGTTAATGCAATAAAGAAAATAATTCCAAGTCAAGAATTTAATAGAACTATT
ACTCTTAATCAAGGACAGAATATTAAAATATATGTTAACAAGGATTATTTGTTTCCAACAAAAGCAGTTAGTGGAGTAAG
AGTACTCTGA

Upstream 100 bases:

>100_bases
ATATTGTATCTAAGGAGCTAGAAGTAGGGCGTGAACATGACTTAGTTTATTTAATTAGATTTTATTATCCACAAAAGAAA
GCGTGCAATAAAGAAAAGTA

Downstream 100 bases:

>100_bases
TGAAGAATAATATTGCACTTGAAACCTATTTAACTCCTTTTAAATTAATTTTTGATGAAGCAGGAGTAAATGAGGTGATG
ATTAACCGCCCTGGTGAGGT

Product: type IV secretion system protein VirB10

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MQNINNDSNQDTQGQCDHSEDSKVVGPEVHNEFSKVASSAKRSVLLTIVIVVISIVILYFVISSIFIDESPKEESIAVPV
PVDVIKPNIELSGDIVIPELPTIPTLITPELPEIKVPNQAKLNDLNNDNSSKDEVVQSNKLPKEPKLIKPPVLPLTEQGE
YNNAKQDAKIPSLDLSAQTKDRAARLQEKRTSTNIVLINKSPPSPTREEMEQIRNFTDAGELRYLLGRGTVIDAVIISAV
NSDFIGEIVAMVSKDVYSQEGKTVLIPRGSKIFGYPSVLDNAAYGRMMITWSEVQIAGSQYKLNLSAPTIDRLGKIGVAG
KVNNKNLARIMHAVLVSAVNIGAAFTLDKVVALQQQMANTTSGLTGTLIKNAMNINNDSVKSDSQKITEICGMSRSLITD
KSSSVYTTINKKCMEIETSIIANVDDKQKLSSLINTIINISNSTANNSNSNTQKATDTALNDVVNAIKKIIPSQEFNRTI
TLNQGQNIKIYVNKDYLFPTKAVSGVRVL

Sequences:

>Translated_509_residues
MQNINNDSNQDTQGQCDHSEDSKVVGPEVHNEFSKVASSAKRSVLLTIVIVVISIVILYFVISSIFIDESPKEESIAVPV
PVDVIKPNIELSGDIVIPELPTIPTLITPELPEIKVPNQAKLNDLNNDNSSKDEVVQSNKLPKEPKLIKPPVLPLTEQGE
YNNAKQDAKIPSLDLSAQTKDRAARLQEKRTSTNIVLINKSPPSPTREEMEQIRNFTDAGELRYLLGRGTVIDAVIISAV
NSDFIGEIVAMVSKDVYSQEGKTVLIPRGSKIFGYPSVLDNAAYGRMMITWSEVQIAGSQYKLNLSAPTIDRLGKIGVAG
KVNNKNLARIMHAVLVSAVNIGAAFTLDKVVALQQQMANTTSGLTGTLIKNAMNINNDSVKSDSQKITEICGMSRSLITD
KSSSVYTTINKKCMEIETSIIANVDDKQKLSSLINTIINISNSTANNSNSNTQKATDTALNDVVNAIKKIIPSQEFNRTI
TLNQGQNIKIYVNKDYLFPTKAVSGVRVL
>Mature_509_residues
MQNINNDSNQDTQGQCDHSEDSKVVGPEVHNEFSKVASSAKRSVLLTIVIVVISIVILYFVISSIFIDESPKEESIAVPV
PVDVIKPNIELSGDIVIPELPTIPTLITPELPEIKVPNQAKLNDLNNDNSSKDEVVQSNKLPKEPKLIKPPVLPLTEQGE
YNNAKQDAKIPSLDLSAQTKDRAARLQEKRTSTNIVLINKSPPSPTREEMEQIRNFTDAGELRYLLGRGTVIDAVIISAV
NSDFIGEIVAMVSKDVYSQEGKTVLIPRGSKIFGYPSVLDNAAYGRMMITWSEVQIAGSQYKLNLSAPTIDRLGKIGVAG
KVNNKNLARIMHAVLVSAVNIGAAFTLDKVVALQQQMANTTSGLTGTLIKNAMNINNDSVKSDSQKITEICGMSRSLITD
KSSSVYTTINKKCMEIETSIIANVDDKQKLSSLINTIINISNSTANNSNSNTQKATDTALNDVVNAIKKIIPSQEFNRTI
TLNQGQNIKIYVNKDYLFPTKAVSGVRVL

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 55515; Mature: 55515

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNINNDSNQDTQGQCDHSEDSKVVGPEVHNEFSKVASSAKRSVLLTIVIVVISIVILYF
CCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISSIFIDESPKEESIAVPVPVDVIKPNIELSGDIVIPELPTIPTLITPELPEIKVPNQA
HHHHHHCCCCCCCCCEEECCCHHHCCCCCEECCCEECCCCCCCCCEECCCCCCCCCCCCC
KLNDLNNDNSSKDEVVQSNKLPKEPKLIKPPVLPLTEQGEYNNAKQDAKIPSLDLSAQTK
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHH
DRAARLQEKRTSTNIVLINKSPPSPTREEMEQIRNFTDAGELRYLLGRGTVIDAVIISAV
HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHH
NSDFIGEIVAMVSKDVYSQEGKTVLIPRGSKIFGYPSVLDNAAYGRMMITWSEVQIAGSQ
CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCHHHHCCCCCCEEEEEEEEEEEECCE
YKLNLSAPTIDRLGKIGVAGKVNNKNLARIMHAVLVSAVNIGAAFTLDKVVALQQQMANT
EEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TSGLTGTLIKNAMNINNDSVKSDSQKITEICGMSRSLITDKSSSVYTTINKKCMEIETSI
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCEEEHHHHHHHHHHHHH
IANVDDKQKLSSLINTIINISNSTANNSNSNTQKATDTALNDVVNAIKKIIPSQEFNRTI
HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCEE
TLNQGQNIKIYVNKDYLFPTKAVSGVRVL
EECCCCEEEEEEECCEECCHHHCCCCCCC
>Mature Secondary Structure
MQNINNDSNQDTQGQCDHSEDSKVVGPEVHNEFSKVASSAKRSVLLTIVIVVISIVILYF
CCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISSIFIDESPKEESIAVPVPVDVIKPNIELSGDIVIPELPTIPTLITPELPEIKVPNQA
HHHHHHCCCCCCCCCEEECCCHHHCCCCCEECCCEECCCCCCCCCEECCCCCCCCCCCCC
KLNDLNNDNSSKDEVVQSNKLPKEPKLIKPPVLPLTEQGEYNNAKQDAKIPSLDLSAQTK
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHH
DRAARLQEKRTSTNIVLINKSPPSPTREEMEQIRNFTDAGELRYLLGRGTVIDAVIISAV
HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHH
NSDFIGEIVAMVSKDVYSQEGKTVLIPRGSKIFGYPSVLDNAAYGRMMITWSEVQIAGSQ
CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEECCHHHHCCCCCCEEEEEEEEEEEECCE
YKLNLSAPTIDRLGKIGVAGKVNNKNLARIMHAVLVSAVNIGAAFTLDKVVALQQQMANT
EEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TSGLTGTLIKNAMNINNDSVKSDSQKITEICGMSRSLITDKSSSVYTTINKKCMEIETSI
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCEEEHHHHHHHHHHHHH
IANVDDKQKLSSLINTIINISNSTANNSNSNTQKATDTALNDVVNAIKKIIPSQEFNRTI
HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCEE
TLNQGQNIKIYVNKDYLFPTKAVSGVRVL
EECCCCEEEEEEECCEECCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 3584073 [H]