Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184472
Identifier: 189184472
GI number: 189184472
Start: 1591183
End: 1592982
Strand: Reverse
Name: 189184472
Synonym: OTT_1565
Alternate gene names: NA
Gene position: 1592982-1591183 (Counterclockwise)
Preceding gene: 189184473
Following gene: 189184470
Centisome position: 79.29
GC content: 29.56
Gene sequence:
>1800_bases ATGCTTAAAGACAGAATTACAGAAAGTATATTAGCAACGAAGTTATTTAAAACATTAATAGCTTCTAATCAATCTAAATT TACAGAAGAAGATATTTTATTGTTAAGTAAAAATCTTATAAGAACCTTAAGCGGCATTTCTGAAAAAAACAGTGTAGCAA GTATAGAAGAATACCAAGCATGTCTTTCTGATTTAGATGATCGAGACTTAATCAAAGTATTGAAAGTATTACAGGATATT TTTGCAGGGGAGGAGCATAAAGACTTCAGAGAAATTATTGAGTTACCACTTTTAGATAGGCTAACTACACAATTTAAAAT AGAACGTATACAAGAATTAAATAATCAACAACCAAGAAATTTTAATAAAAACTTAGGTAATAACAATATTGAGGAGCTGC TGCGTGATAAAAACATTGCTAAACAAGAAGAGTTTTCTCCTAAAGGTCCTAAACAAGCTGGTGTTTCTGCAGGATATATT GCTACTGAAAAGTCTAGTGGCAATATTTTTCTTCTAAAGAAGTTTTATAAAAGCAATGCTAGTGCAAAAAAAGGCTCAAC AAGTATTTTATGTTGTATAAATTCACAGAAATTAAACCAAGCTCAAAGTGATATGAAAGATGCTATGCAAGAATTACTAG CATCACAGATGTATCAATTATTATTATATGATCAAGCTCCTAAAGAAGCGTTAACAATGCCAGATAAATTGAATTCAGAT TTTCTTTATATACGATCTAAATTTCTTAAGAATGCAGTAACACTTTCTGAGTTCTCTGGCTTAAAAGATGTTACTTGTAT TGATCCAAGCGCTAGCTGTCTAAAACAATTAGAAGGATTTGAAAAAGTAATTGCTGCTTGCCATATGTTAGGAGATATAG ATTATCATGCTGCTAATTTAATAGTACTTGATGGTAAAACTATAGCTAAAATAGATCATGGCAGAGCATTTGTGGAATTT TATAAAGATTTTGCAAATATGGTTAACTCAACATATAAAAGATTTAAAAAACGAGGTCAAAATTATGCTTTAGCAATTCA ATGCGGTAACTTGTGCTTTGATATTAGCAAATATAATACTGCATTAAGACAAATGATAGATCAATTAAATGAAGACCAGA TAGAGACTATAATAGAGCAAAAAGCTGCTGAGCTAAGAAAGCTAGGATTTAATCCAAATGACTTAATTGTACAAGCGAGC TTTGGAAGTGGTATAGTTAATAGTGCTGTCATAAGTGACTACAAAGGTCTCGAAGAATTTTATAAAGAAAATCTGAAAAA AAACCTTCAAAATATGAAAGAAATAGCTAAAGCAACAAATATAGTAGCTAAGTTTAGCAATGTATCTCAAGAGTTTAAAG AGGGAGGATGGTTAAAAGCTTTTGCTACTTCTAAAATACAAGATCCAGTATTATATGCACATAATACTAATATTGCAATT GATAAGAAAAGGGCCTTAGAATGGGCTATTGCTAATAATTATGATATTAAACATTATGACAGTGATATATACTGTGATTG GCAACAAGAATGGCTAAAAAGTAATTATGATAAATTGCAAAAAATAAACCAGTGTATTTTAACGCAAGAAAAAAAAATAG TTGAATGTAATGCTGAAGGTCATACTATAGAAAGCAAAAATCATCAAAAAAGTTTAAATAATAAAACTGATTTTTTATCA AGTAGTAAAGAAGTATTACTAAAGTCTAAAGCAAATTACCAGTTTGATATTAACCAAAAAAAAGAACCTGCAGTATTTAA GCTCAAACCTAAAACTTCACAAGGAAGGAGCATGGTTTGA
Upstream 100 bases:
>100_bases GATAGCTTATTCGAAGGTTTATATATTCTCTTTTTTCAGTAACTACATTCAGAGAATTTAACTATATACGCAAAGATATA TTGATTAATGAGGGCTTTAA
Downstream 100 bases:
>100_bases CTATATAGTCTAACTCATCAAATGTATCAATTTATAGATTATCTTGTTTATTACACTTCATGAAATGTAATAAACAGTTT AATATTTTTTCCTTCTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 599; Mature: 599
Protein sequence:
>599_residues MLKDRITESILATKLFKTLIASNQSKFTEEDILLLSKNLIRTLSGISEKNSVASIEEYQACLSDLDDRDLIKVLKVLQDI FAGEEHKDFREIIELPLLDRLTTQFKIERIQELNNQQPRNFNKNLGNNNIEELLRDKNIAKQEEFSPKGPKQAGVSAGYI ATEKSSGNIFLLKKFYKSNASAKKGSTSILCCINSQKLNQAQSDMKDAMQELLASQMYQLLLYDQAPKEALTMPDKLNSD FLYIRSKFLKNAVTLSEFSGLKDVTCIDPSASCLKQLEGFEKVIAACHMLGDIDYHAANLIVLDGKTIAKIDHGRAFVEF YKDFANMVNSTYKRFKKRGQNYALAIQCGNLCFDISKYNTALRQMIDQLNEDQIETIIEQKAAELRKLGFNPNDLIVQAS FGSGIVNSAVISDYKGLEEFYKENLKKNLQNMKEIAKATNIVAKFSNVSQEFKEGGWLKAFATSKIQDPVLYAHNTNIAI DKKRALEWAIANNYDIKHYDSDIYCDWQQEWLKSNYDKLQKINQCILTQEKKIVECNAEGHTIESKNHQKSLNNKTDFLS SSKEVLLKSKANYQFDINQKKEPAVFKLKPKTSQGRSMV
Sequences:
>Translated_599_residues MLKDRITESILATKLFKTLIASNQSKFTEEDILLLSKNLIRTLSGISEKNSVASIEEYQACLSDLDDRDLIKVLKVLQDI FAGEEHKDFREIIELPLLDRLTTQFKIERIQELNNQQPRNFNKNLGNNNIEELLRDKNIAKQEEFSPKGPKQAGVSAGYI ATEKSSGNIFLLKKFYKSNASAKKGSTSILCCINSQKLNQAQSDMKDAMQELLASQMYQLLLYDQAPKEALTMPDKLNSD FLYIRSKFLKNAVTLSEFSGLKDVTCIDPSASCLKQLEGFEKVIAACHMLGDIDYHAANLIVLDGKTIAKIDHGRAFVEF YKDFANMVNSTYKRFKKRGQNYALAIQCGNLCFDISKYNTALRQMIDQLNEDQIETIIEQKAAELRKLGFNPNDLIVQAS FGSGIVNSAVISDYKGLEEFYKENLKKNLQNMKEIAKATNIVAKFSNVSQEFKEGGWLKAFATSKIQDPVLYAHNTNIAI DKKRALEWAIANNYDIKHYDSDIYCDWQQEWLKSNYDKLQKINQCILTQEKKIVECNAEGHTIESKNHQKSLNNKTDFLS SSKEVLLKSKANYQFDINQKKEPAVFKLKPKTSQGRSMV >Mature_599_residues MLKDRITESILATKLFKTLIASNQSKFTEEDILLLSKNLIRTLSGISEKNSVASIEEYQACLSDLDDRDLIKVLKVLQDI FAGEEHKDFREIIELPLLDRLTTQFKIERIQELNNQQPRNFNKNLGNNNIEELLRDKNIAKQEEFSPKGPKQAGVSAGYI ATEKSSGNIFLLKKFYKSNASAKKGSTSILCCINSQKLNQAQSDMKDAMQELLASQMYQLLLYDQAPKEALTMPDKLNSD FLYIRSKFLKNAVTLSEFSGLKDVTCIDPSASCLKQLEGFEKVIAACHMLGDIDYHAANLIVLDGKTIAKIDHGRAFVEF YKDFANMVNSTYKRFKKRGQNYALAIQCGNLCFDISKYNTALRQMIDQLNEDQIETIIEQKAAELRKLGFNPNDLIVQAS FGSGIVNSAVISDYKGLEEFYKENLKKNLQNMKEIAKATNIVAKFSNVSQEFKEGGWLKAFATSKIQDPVLYAHNTNIAI DKKRALEWAIANNYDIKHYDSDIYCDWQQEWLKSNYDKLQKINQCILTQEKKIVECNAEGHTIESKNHQKSLNNKTDFLS SSKEVLLKSKANYQFDINQKKEPAVFKLKPKTSQGRSMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68147; Mature: 68147
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKDRITESILATKLFKTLIASNQSKFTEEDILLLSKNLIRTLSGISEKNSVASIEEYQA CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH CLSDLDDRDLIKVLKVLQDIFAGEEHKDFREIIELPLLDRLTTQFKIERIQELNNQQPRN HHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FNKNLGNNNIEELLRDKNIAKQEEFSPKGPKQAGVSAGYIATEKSSGNIFLLKKFYKSNA CCCCCCCCHHHHHHHCCCCCHHHCCCCCCCHHHCCCCCEEEEECCCCCEEEEEHHHHCCC SAKKGSTSILCCINSQKLNQAQSDMKDAMQELLASQMYQLLLYDQAPKEALTMPDKLNSD CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCC FLYIRSKFLKNAVTLSEFSGLKDVTCIDPSASCLKQLEGFEKVIAACHMLGDIDYHAANL HHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE IVLDGKTIAKIDHGRAFVEFYKDFANMVNSTYKRFKKRGQNYALAIQCGNLCFDISKYNT EEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEHHHHHH ALRQMIDQLNEDQIETIIEQKAAELRKLGFNPNDLIVQASFGSGIVNSAVISDYKGLEEF HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH YKENLKKNLQNMKEIAKATNIVAKFSNVSQEFKEGGWLKAFATSKIQDPVLYAHNTNIAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCEEEEECCCEEE DKKRALEWAIANNYDIKHYDSDIYCDWQQEWLKSNYDKLQKINQCILTQEKKIVECNAEG EHHHHHEEHHCCCCCCEECCCCEEECHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCC HTIESKNHQKSLNNKTDFLSSSKEVLLKSKANYQFDINQKKEPAVFKLKPKTSQGRSMV CEECCCCHHHHCCCHHHHHCCCHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MLKDRITESILATKLFKTLIASNQSKFTEEDILLLSKNLIRTLSGISEKNSVASIEEYQA CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH CLSDLDDRDLIKVLKVLQDIFAGEEHKDFREIIELPLLDRLTTQFKIERIQELNNQQPRN HHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FNKNLGNNNIEELLRDKNIAKQEEFSPKGPKQAGVSAGYIATEKSSGNIFLLKKFYKSNA CCCCCCCCHHHHHHHCCCCCHHHCCCCCCCHHHCCCCCEEEEECCCCCEEEEEHHHHCCC SAKKGSTSILCCINSQKLNQAQSDMKDAMQELLASQMYQLLLYDQAPKEALTMPDKLNSD CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCC FLYIRSKFLKNAVTLSEFSGLKDVTCIDPSASCLKQLEGFEKVIAACHMLGDIDYHAANL HHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE IVLDGKTIAKIDHGRAFVEFYKDFANMVNSTYKRFKKRGQNYALAIQCGNLCFDISKYNT EEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEHHHHHH ALRQMIDQLNEDQIETIIEQKAAELRKLGFNPNDLIVQASFGSGIVNSAVISDYKGLEEF HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH YKENLKKNLQNMKEIAKATNIVAKFSNVSQEFKEGGWLKAFATSKIQDPVLYAHNTNIAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCEEEEECCCEEE DKKRALEWAIANNYDIKHYDSDIYCDWQQEWLKSNYDKLQKINQCILTQEKKIVECNAEG EHHHHHEEHHCCCCCCEECCCCEEECHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCC HTIESKNHQKSLNNKTDFLSSSKEVLLKSKANYQFDINQKKEPAVFKLKPKTSQGRSMV CEECCCCHHHHCCCHHHHHCCCHHHHHHCCCCEEEECCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]