Click here to switch to the map view.

The map label for this gene is bioC

Identifier: 189184454

GI number: 189184454

Start: 1577939

End: 1578742

Strand: Reverse

Name: bioC

Synonym: OTT_1547

Alternate gene names: NA

Gene position: 1578742-1577939 (Counterclockwise)

Preceding gene: 189184456

Following gene: 189184453

Centisome position: 78.58

GC content: 29.73

Gene sequence:

>804_bases
ATGAATTATATTTTTAATCGTGAAGCATATAGGATGCAACGTAATATAAAAGTTGCTAATGAAATACATAGCTGTAGTTT
TTTACTCAACTTCTGTGTAGATGATATAGTATGTCGACTTAGTCAAATAAATCAACAATTTAGTAATATTTTGGATTTAG
GAGCAAGAAATGGAATTTTAACTAGTAAGCTTAAGAAGCTATATAATAAAAGTAATATTGTAGCTTTAGAGATAGCAGAA
AATCTTATAAACCAAATTCATGATAATGATATAATGAAAGTAATTGCTGATGATGCCAATATTCCGTTTTTGAATGAGAG
TTTTGATTTGGTTGCATCTTTATTAAATATGCACTGGTTAAATGATTTTCAGATATTTTTAAAGCAAGTGCTACAAGTTT
TAACTGGTAACGGCGCTTTTATTGGATGCTTATTTGGTGAAAATACTCTTAGTGTTTTAAGAAAAAAGTTGGTAGAAGCA
GAATCTATTTTGCAGCTACCACATACTCCTCATATTTCTCCATTTATAAGAGTTGAGGATGCTGTGAAGTTATTTCAGTT
AGCTGGTTTTACTGTAATTGTTGATATTGAAACAATAGAAGTGGAGTATAAAAGCTGTTTAGATTTAATGAAGGAATTAG
GTAATATGGGCGAAGCAGCAAAATTTCATCAGCGTCAGTTAGGGCTGCATAAAAAATTATTGCATTTTTTAATGGATGAG
CAGTCTCCAATTAGTGAAAAATTTGATATTATTGCGTTTATTGCATTCAAGAATCCCGAATCATTCAGTATTAAGGATCT
TTAA

Upstream 100 bases:

>100_bases
GTTTCAGTTGTATTGATCCTCTATCATATATCATGATTATACATATACTGTATTATCTTACAAAATATTTCTTTTAGTTA
GCTAAATATTAAAACAGGCT

Downstream 100 bases:

>100_bases
TGCTATATTTATACTAGACTTTTTATATTACTATCGGTAATTTAAGGTACTGTTGATATTGATTTGTTTTTATTAAATAA
AAGAGGAAAAAATGCCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MNYIFNREAYRMQRNIKVANEIHSCSFLLNFCVDDIVCRLSQINQQFSNILDLGARNGILTSKLKKLYNKSNIVALEIAE
NLINQIHDNDIMKVIADDANIPFLNESFDLVASLLNMHWLNDFQIFLKQVLQVLTGNGAFIGCLFGENTLSVLRKKLVEA
ESILQLPHTPHISPFIRVEDAVKLFQLAGFTVIVDIETIEVEYKSCLDLMKELGNMGEAAKFHQRQLGLHKKLLHFLMDE
QSPISEKFDIIAFIAFKNPESFSIKDL

Sequences:

>Translated_267_residues
MNYIFNREAYRMQRNIKVANEIHSCSFLLNFCVDDIVCRLSQINQQFSNILDLGARNGILTSKLKKLYNKSNIVALEIAE
NLINQIHDNDIMKVIADDANIPFLNESFDLVASLLNMHWLNDFQIFLKQVLQVLTGNGAFIGCLFGENTLSVLRKKLVEA
ESILQLPHTPHISPFIRVEDAVKLFQLAGFTVIVDIETIEVEYKSCLDLMKELGNMGEAAKFHQRQLGLHKKLLHFLMDE
QSPISEKFDIIAFIAFKNPESFSIKDL
>Mature_267_residues
MNYIFNREAYRMQRNIKVANEIHSCSFLLNFCVDDIVCRLSQINQQFSNILDLGARNGILTSKLKKLYNKSNIVALEIAE
NLINQIHDNDIMKVIADDANIPFLNESFDLVASLLNMHWLNDFQIFLKQVLQVLTGNGAFIGCLFGENTLSVLRKKLVEA
ESILQLPHTPHISPFIRVEDAVKLFQLAGFTVIVDIETIEVEYKSCLDLMKELGNMGEAAKFHQRQLGLHKKLLHFLMDE
QSPISEKFDIIAFIAFKNPESFSIKDL

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40018642, Length=273, Percent_Identity=32.967032967033, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI86792933, Length=270, Percent_Identity=28.8888888888889, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17535003, Length=276, Percent_Identity=26.0869565217391, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI19922210, Length=273, Percent_Identity=26.7399267399267, Blast_Score=99, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 30518; Mature: 30518

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYIFNREAYRMQRNIKVANEIHSCSFLLNFCVDDIVCRLSQINQQFSNILDLGARNGIL
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TSKLKKLYNKSNIVALEIAENLINQIHDNDIMKVIADDANIPFLNESFDLVASLLNMHWL
HHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
NDFQIFLKQVLQVLTGNGAFIGCLFGENTLSVLRKKLVEAESILQLPHTPHISPFIRVED
HHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
AVKLFQLAGFTVIVDIETIEVEYKSCLDLMKELGNMGEAAKFHQRQLGLHKKLLHFLMDE
HHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
QSPISEKFDIIAFIAFKNPESFSIKDL
CCCCCHHCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MNYIFNREAYRMQRNIKVANEIHSCSFLLNFCVDDIVCRLSQINQQFSNILDLGARNGIL
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TSKLKKLYNKSNIVALEIAENLINQIHDNDIMKVIADDANIPFLNESFDLVASLLNMHWL
HHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
NDFQIFLKQVLQVLTGNGAFIGCLFGENTLSVLRKKLVEAESILQLPHTPHISPFIRVED
HHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
AVKLFQLAGFTVIVDIETIEVEYKSCLDLMKELGNMGEAAKFHQRQLGLHKKLLHFLMDE
HHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
QSPISEKFDIIAFIAFKNPESFSIKDL
CCCCCHHCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]