| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184433
Identifier: 189184433
GI number: 189184433
Start: 1554608
End: 1556173
Strand: Reverse
Name: 189184433
Synonym: OTT_1526
Alternate gene names: NA
Gene position: 1556173-1554608 (Counterclockwise)
Preceding gene: 189184434
Following gene: 189184431
Centisome position: 77.46
GC content: 29.5
Gene sequence:
>1566_bases ATGAAAAACAGCATAAATTTACAGCTAGCAATTGAACAAGGCAATTATTCTGATATTAAAAAAGCATTGGATAATGGAGC AAGTATTAGCAACCTTAATAATATTAAACTTTTTGATAAATTGATTAATATAGCTTGTGTCAATGACGATTATAATCTTG CGAAGGAAGTTATAGAAGTTATGTCACAATTTGTTGACCATAATATTGATTTATTAAAATTTGCTATTAACACAGGTAAT TATAGTTCTATAATTGCTACCTTGGAAGCTATGCGCAAAAACGTATTAGATAAACTTTCTAGCAATGAACGTAATAGTTG TTTAAAGATTGTTACTGAAAACCGTAATTATGATGCAATAAATCAAGCACTAGAATATGGTGCAGATATAAAGACTCTTG ACAATAATCTCAAAGATATTGCATTAGAAGCTGTTAGCAAAATTTCAGATTATAATCTGATAAAAGAAGGACTGCAATAT GGTGCAGAAATGCGTAACCTTACAAACCGTAGCAAATATAACATAATGATAAGTGCTATTGAAAATAATGATAATGATTT AATAAAAAAAGCAGCAAACCTTTTCGAAAATTTTGATGAATTGAATAAAGATGAGTGTAGCAATATCAGATTGCAACGTA ATATTATGAACGGTTTAAAATTTTCAGATCATAATACTGACGATATAATAGAAGGTATTAATAAGTACTATACATTTTAT GGTGCGAAGCATTTAATAGATCATTGTAGTGCAGATTTGCATGGTCTTACGGTAGGAGGACGACGTGTTGTTGTTCATGA AATAACTGAGTGTAATATGTTGGAAACAATACTACACATCAGTAAAAGTATAGATAATAATCGTATTGATCAGATGAAAA TATCAGCACCTATATTTAATTCTATCGTTCAGTGCTACAGCCATCAAATTGCCATAAGATATACTGCTGATAAAAGTAAT CTGCAAATAGCATATCTGTATGGTCAGGTAAAAAGAGCAATACTAAATTCAGCTATAGATATAGATGGATTCAATGATGT AAAATCTTATTTATTAAGAATTGCTTCTGAAAAAAATGATTTTAATGTTGTAAAAGAGATGCTAACACTTGGCGTTAATC CTGGTAATATGTTATCAAGTAGCGGAGTTCTATCTAAAGAAATGACAGATGTATGGAATACATATAAATGGCTTGAATCA AAAAACTATCTTTCTAACAATGCACTTACTCCAAATTCGATAAAGTATTGTTTTAAGGTGTATGAATGGATTTTAGCAGA AAAGTATATAGACAAATCAATACCTGACATCATAACTTGTTTTATTGAATGTGATCTATCAGCTAGCATACTAGCTGCTA TAGTTACTGAGCCTACATATTATAATACAAAGTTGTATGATTGTTTTATGGAATTAATAAAAGGAGGTATTAGCGACAAT AATGTAGATGTAAGTGATTGCAGCCTGGCTGTTTCTAGTATAGCAAAAGCTACAGATAATATGTCTGAAATAAATATTCC ATTAGGTGAAAATTATAGTACTTTTGCTGATAAAGAATATTGCTAG
Upstream 100 bases:
>100_bases GTTTACATATTTATTTTTAATAAAAATTGCTAAACATATTACATTTATTACATTATAGTATATCTTGATTAATAAATATA AAAATTTTGGAATTTTTAAT
Downstream 100 bases:
>100_bases CTCTTAGGATATTGGCTTTATGATATCAAGTTTGTACTGAACATTGAGAAGGCCATTCTTTAAGGCCTCAATGTCCTTAA CATAGTCGCACCATTCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 521; Mature: 521
Protein sequence:
>521_residues MKNSINLQLAIEQGNYSDIKKALDNGASISNLNNIKLFDKLINIACVNDDYNLAKEVIEVMSQFVDHNIDLLKFAINTGN YSSIIATLEAMRKNVLDKLSSNERNSCLKIVTENRNYDAINQALEYGADIKTLDNNLKDIALEAVSKISDYNLIKEGLQY GAEMRNLTNRSKYNIMISAIENNDNDLIKKAANLFENFDELNKDECSNIRLQRNIMNGLKFSDHNTDDIIEGINKYYTFY GAKHLIDHCSADLHGLTVGGRRVVVHEITECNMLETILHISKSIDNNRIDQMKISAPIFNSIVQCYSHQIAIRYTADKSN LQIAYLYGQVKRAILNSAIDIDGFNDVKSYLLRIASEKNDFNVVKEMLTLGVNPGNMLSSSGVLSKEMTDVWNTYKWLES KNYLSNNALTPNSIKYCFKVYEWILAEKYIDKSIPDIITCFIECDLSASILAAIVTEPTYYNTKLYDCFMELIKGGISDN NVDVSDCSLAVSSIAKATDNMSEINIPLGENYSTFADKEYC
Sequences:
>Translated_521_residues MKNSINLQLAIEQGNYSDIKKALDNGASISNLNNIKLFDKLINIACVNDDYNLAKEVIEVMSQFVDHNIDLLKFAINTGN YSSIIATLEAMRKNVLDKLSSNERNSCLKIVTENRNYDAINQALEYGADIKTLDNNLKDIALEAVSKISDYNLIKEGLQY GAEMRNLTNRSKYNIMISAIENNDNDLIKKAANLFENFDELNKDECSNIRLQRNIMNGLKFSDHNTDDIIEGINKYYTFY GAKHLIDHCSADLHGLTVGGRRVVVHEITECNMLETILHISKSIDNNRIDQMKISAPIFNSIVQCYSHQIAIRYTADKSN LQIAYLYGQVKRAILNSAIDIDGFNDVKSYLLRIASEKNDFNVVKEMLTLGVNPGNMLSSSGVLSKEMTDVWNTYKWLES KNYLSNNALTPNSIKYCFKVYEWILAEKYIDKSIPDIITCFIECDLSASILAAIVTEPTYYNTKLYDCFMELIKGGISDN NVDVSDCSLAVSSIAKATDNMSEINIPLGENYSTFADKEYC >Mature_521_residues MKNSINLQLAIEQGNYSDIKKALDNGASISNLNNIKLFDKLINIACVNDDYNLAKEVIEVMSQFVDHNIDLLKFAINTGN YSSIIATLEAMRKNVLDKLSSNERNSCLKIVTENRNYDAINQALEYGADIKTLDNNLKDIALEAVSKISDYNLIKEGLQY GAEMRNLTNRSKYNIMISAIENNDNDLIKKAANLFENFDELNKDECSNIRLQRNIMNGLKFSDHNTDDIIEGINKYYTFY GAKHLIDHCSADLHGLTVGGRRVVVHEITECNMLETILHISKSIDNNRIDQMKISAPIFNSIVQCYSHQIAIRYTADKSN LQIAYLYGQVKRAILNSAIDIDGFNDVKSYLLRIASEKNDFNVVKEMLTLGVNPGNMLSSSGVLSKEMTDVWNTYKWLES KNYLSNNALTPNSIKYCFKVYEWILAEKYIDKSIPDIITCFIECDLSASILAAIVTEPTYYNTKLYDCFMELIKGGISDN NVDVSDCSLAVSSIAKATDNMSEINIPLGENYSTFADKEYC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58792; Mature: 58792
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSINLQLAIEQGNYSDIKKALDNGASISNLNNIKLFDKLINIACVNDDYNLAKEVIEV CCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHHH MSQFVDHNIDLLKFAINTGNYSSIIATLEAMRKNVLDKLSSNERNSCLKIVTENRNYDAI HHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH NQALEYGADIKTLDNNLKDIALEAVSKISDYNLIKEGLQYGAEMRNLTNRSKYNIMISAI HHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE ENNDNDLIKKAANLFENFDELNKDECSNIRLQRNIMNGLKFSDHNTDDIIEGINKYYTFY ECCCHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH GAKHLIDHCSADLHGLTVGGRRVVVHEITECNMLETILHISKSIDNNRIDQMKISAPIFN HHHHHHHHHCCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHH SIVQCYSHQIAIRYTADKSNLQIAYLYGQVKRAILNSAIDIDGFNDVKSYLLRIASEKND HHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH FNVVKEMLTLGVNPGNMLSSSGVLSKEMTDVWNTYKWLESKNYLSNNALTPNSIKYCFKV HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH YEWILAEKYIDKSIPDIITCFIECDLSASILAAIVTEPTYYNTKLYDCFMELIKGGISDN HHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC NVDVSDCSLAVSSIAKATDNMSEINIPLGENYSTFADKEYC CCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKNSINLQLAIEQGNYSDIKKALDNGASISNLNNIKLFDKLINIACVNDDYNLAKEVIEV CCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHHH MSQFVDHNIDLLKFAINTGNYSSIIATLEAMRKNVLDKLSSNERNSCLKIVTENRNYDAI HHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH NQALEYGADIKTLDNNLKDIALEAVSKISDYNLIKEGLQYGAEMRNLTNRSKYNIMISAI HHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE ENNDNDLIKKAANLFENFDELNKDECSNIRLQRNIMNGLKFSDHNTDDIIEGINKYYTFY ECCCHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH GAKHLIDHCSADLHGLTVGGRRVVVHEITECNMLETILHISKSIDNNRIDQMKISAPIFN HHHHHHHHHCCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHH SIVQCYSHQIAIRYTADKSNLQIAYLYGQVKRAILNSAIDIDGFNDVKSYLLRIASEKND HHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCH FNVVKEMLTLGVNPGNMLSSSGVLSKEMTDVWNTYKWLESKNYLSNNALTPNSIKYCFKV HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH YEWILAEKYIDKSIPDIITCFIECDLSASILAAIVTEPTYYNTKLYDCFMELIKGGISDN HHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC NVDVSDCSLAVSSIAKATDNMSEINIPLGENYSTFADKEYC CCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA