| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183649
Identifier: 189183649
GI number: 189183649
Start: 767167
End: 768396
Strand: Direct
Name: 189183649
Synonym: OTT_0742
Alternate gene names: NA
Gene position: 767167-768396 (Clockwise)
Preceding gene: 189183648
Following gene: 189183654
Centisome position: 38.19
GC content: 32.68
Gene sequence:
>1230_bases ATGAACACAAGTAATAATTTTTATGTTTTCTTTCTTATATCATTTAGTTGCCACTTAATATTAAGTTATGTAGCAATATT TTTTACTTCACAACAACCTCAACTTCATAATAAAATAATCAGTCTTGAGCTTGTTCAAATGAATAAAGTAACCAATAAAA CAACCAGCAATTCTCAAAAAGCAACCAATAACAAACAAACCACTTTTCAATTAAAACAAAACAATCTTCGCAAACCTAAT ATAAAGCATAATGCTAGAAATAATCTAACTAATTATAACTCAATTAGCAATAAGATAAAGCCTATTACTACTCCTGCTCC ATCACCTACTTTACCTATAACTCCTAAAGTTACAGAGCCACCTTTAAAAATCGACTCTATCGAACAAAAAGCTAGTACTT CCAATGTTCCAGAAAAAATTGCTTCCGCTCCTCAAGCTACACCGAAAGTCATAGAGCAAACTTTACAAAGCCCACCTATC GAACATAAAGCTAATGTTGCTACTACAACAGAAAGTAGTGCTTCTACTACTCAGCCTATAACTCCTAAAGTTACAGAGCC ACCTTTAAAAATCGACTCTATCGAACAAAAAGCTAGTACTTCCAATGTTCCAGAAAAAATTGCTTCCGCTCCTCAAGCTA CACAGAAAGTCATAGAGCCAACTTTACAAAGCTCTCTTATCGAACATAAAACTAATGTTGCTACTACAACAGAAAGTAAT GCTTCTACTACTCAGCCTATAATTCCTAAAGTTATAGATCCGCCTTTAAAAAGCAGTCATATCGAGGATAAAACTAGCGT TCCTCATACTAACGATACAAGTCATTCAATTACTCAAAAGAATAATCTTGCTACAAGCAATATCGCAGCTGAACAACAAT ATATAGCTAACAATCATGCTAGCAGACAAAATACTAATAATACTGATAATACTAATAGCACAAGTTATACAGACACAATT AAGTATCAAATTCAAGCGCATTGGAACCATACTATAGGATTCATACCAGGAATCAGTACAGTATTAATGGTAAACTTAAC ATTAGATGGTACAATTGAAAATATTACAGATATTAGTCATAACTGCCCTAATAATAACACTACAGTTTGCAATGTATTTA TTCAAAATGTTAAACGAGCAATTTGGGCAGCAAGCCCATTTCAAGAGTTACCAAAAGAAGAATATAATGCATGGCAACAA CTTGTTCTTGAGTTTAATCCTGAAGATTAA
Upstream 100 bases:
>100_bases AAAGCAGATCAAAATTTGCAGTATGGTGAAATAGCAAAACTACTTGCTGAAATTACAAGTGCGGGGTTTACAAAAGTAGC TTTAATTACAGATAACTGTA
Downstream 100 bases:
>100_bases GTATTTTTCAATACTGAAGTTCTTGCTATATTACTATATTGATATGTAATAGCAGATTCTTTGCATACTAAAGAAGAAAT TTTTCAACTCTGATATTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MNTSNNFYVFFLISFSCHLILSYVAIFFTSQQPQLHNKIISLELVQMNKVTNKTTSNSQKATNNKQTTFQLKQNNLRKPN IKHNARNNLTNYNSISNKIKPITTPAPSPTLPITPKVTEPPLKIDSIEQKASTSNVPEKIASAPQATPKVIEQTLQSPPI EHKANVATTTESSASTTQPITPKVTEPPLKIDSIEQKASTSNVPEKIASAPQATQKVIEPTLQSSLIEHKTNVATTTESN ASTTQPIIPKVIDPPLKSSHIEDKTSVPHTNDTSHSITQKNNLATSNIAAEQQYIANNHASRQNTNNTDNTNSTSYTDTI KYQIQAHWNHTIGFIPGISTVLMVNLTLDGTIENITDISHNCPNNNTTVCNVFIQNVKRAIWAASPFQELPKEEYNAWQQ LVLEFNPED
Sequences:
>Translated_409_residues MNTSNNFYVFFLISFSCHLILSYVAIFFTSQQPQLHNKIISLELVQMNKVTNKTTSNSQKATNNKQTTFQLKQNNLRKPN IKHNARNNLTNYNSISNKIKPITTPAPSPTLPITPKVTEPPLKIDSIEQKASTSNVPEKIASAPQATPKVIEQTLQSPPI EHKANVATTTESSASTTQPITPKVTEPPLKIDSIEQKASTSNVPEKIASAPQATQKVIEPTLQSSLIEHKTNVATTTESN ASTTQPIIPKVIDPPLKSSHIEDKTSVPHTNDTSHSITQKNNLATSNIAAEQQYIANNHASRQNTNNTDNTNSTSYTDTI KYQIQAHWNHTIGFIPGISTVLMVNLTLDGTIENITDISHNCPNNNTTVCNVFIQNVKRAIWAASPFQELPKEEYNAWQQ LVLEFNPED >Mature_409_residues MNTSNNFYVFFLISFSCHLILSYVAIFFTSQQPQLHNKIISLELVQMNKVTNKTTSNSQKATNNKQTTFQLKQNNLRKPN IKHNARNNLTNYNSISNKIKPITTPAPSPTLPITPKVTEPPLKIDSIEQKASTSNVPEKIASAPQATPKVIEQTLQSPPI EHKANVATTTESSASTTQPITPKVTEPPLKIDSIEQKASTSNVPEKIASAPQATQKVIEPTLQSSLIEHKTNVATTTESN ASTTQPIIPKVIDPPLKSSHIEDKTSVPHTNDTSHSITQKNNLATSNIAAEQQYIANNHASRQNTNNTDNTNSTSYTDTI KYQIQAHWNHTIGFIPGISTVLMVNLTLDGTIENITDISHNCPNNNTTVCNVFIQNVKRAIWAASPFQELPKEEYNAWQQ LVLEFNPED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45249; Mature: 45249
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSNNFYVFFLISFSCHLILSYVAIFFTSQQPQLHNKIISLELVQMNKVTNKTTSNSQK CCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEEEEHHHHHCCCCCCCHH ATNNKQTTFQLKQNNLRKPNIKHNARNNLTNYNSISNKIKPITTPAPSPTLPITPKVTEP CCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC PLKIDSIEQKASTSNVPEKIASAPQATPKVIEQTLQSPPIEHKANVATTTESSASTTQPI CCCHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCC TPKVTEPPLKIDSIEQKASTSNVPEKIASAPQATQKVIEPTLQSSLIEHKTNVATTTESN CCCCCCCCCCHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCC ASTTQPIIPKVIDPPLKSSHIEDKTSVPHTNDTSHSITQKNNLATSNIAAEQQYIANNHA CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCC SRQNTNNTDNTNSTSYTDTIKYQIQAHWNHTIGFIPGISTVLMVNLTLDGTIENITDISH CCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEECCCCCCEEEEEEEEECCCHHHHHHHHC NCPNNNTTVCNVFIQNVKRAIWAASPFQELPKEEYNAWQQLVLEFNPED CCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNTSNNFYVFFLISFSCHLILSYVAIFFTSQQPQLHNKIISLELVQMNKVTNKTTSNSQK CCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEEEEHHHHHCCCCCCCHH ATNNKQTTFQLKQNNLRKPNIKHNARNNLTNYNSISNKIKPITTPAPSPTLPITPKVTEP CCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC PLKIDSIEQKASTSNVPEKIASAPQATPKVIEQTLQSPPIEHKANVATTTESSASTTQPI CCCHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCC TPKVTEPPLKIDSIEQKASTSNVPEKIASAPQATQKVIEPTLQSSLIEHKTNVATTTESN CCCCCCCCCCHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCC ASTTQPIIPKVIDPPLKSSHIEDKTSVPHTNDTSHSITQKNNLATSNIAAEQQYIANNHA CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCC SRQNTNNTDNTNSTSYTDTIKYQIQAHWNHTIGFIPGISTVLMVNLTLDGTIENITDISH CCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEECCCCCCEEEEEEEEECCCHHHHHHHHC NCPNNNTTVCNVFIQNVKRAIWAASPFQELPKEEYNAWQQLVLEFNPED CCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA