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The map label for this gene is tolR [H]

Identifier: 189183648

GI number: 189183648

Start: 766722

End: 767180

Strand: Direct

Name: tolR [H]

Synonym: OTT_0741

Alternate gene names: 189183648

Gene position: 766722-767180 (Clockwise)

Preceding gene: 189183647

Following gene: 189183649

Centisome position: 38.16

GC content: 29.41

Gene sequence:

>459_bases
ATGGACAACAATACAATAAATGCTATTAGCAATGTATTCGCTAAAAAGCGCTCTAAGAGAGCATTAATTAGCAATATAAA
TGTCACGCCTCTAGTAGATGTAATGTTAGTATTATTAATTGTATTTATGGTCACATCTCCAATGTTGACTTTAGGCGTTA
ATATTAATTTACCTAAAACTAGCGCAAGTCAACCATTATCAGAGCAAAGCGAACCTTTAACTATTAGTATTGATAAAAGC
AATAATATATATATATTTAAAACTAAAATCAGTAAAACGCAATTAGTCAATAAGCTTAAAGCACTTACTAGAACTAAAGG
AAAATTTAATACCAGAATTTTTATCAAAGCAGATCAAAATTTGCAGTATGGTGAAATAGCAAAACTACTTGCTGAAATTA
CAAGTGCGGGGTTTACAAAAGTAGCTTTAATTACAGATAACTGTAATGAACACAAGTAA

Upstream 100 bases:

>100_bases
TATTAACTCATAAGGTATCATTGATAGAAAATAAATTAGAGAATTTTATTAGAAAATTTTATACTGTATTGTGTAAAACA
ATAGACAAAAGATAAACAAT

Downstream 100 bases:

>100_bases
TAATTTTTATGTTTTCTTTCTTATATCATTTAGTTGCCACTTAATATTAAGTTATGTAGCAATATTTTTTACTTCACAAC
AACCTCAACTTCATAATAAA

Product: TolR protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MDNNTINAISNVFAKKRSKRALISNINVTPLVDVMLVLLIVFMVTSPMLTLGVNINLPKTSASQPLSEQSEPLTISIDKS
NNIYIFKTKISKTQLVNKLKALTRTKGKFNTRIFIKADQNLQYGEIAKLLAEITSAGFTKVALITDNCNEHK

Sequences:

>Translated_152_residues
MDNNTINAISNVFAKKRSKRALISNINVTPLVDVMLVLLIVFMVTSPMLTLGVNINLPKTSASQPLSEQSEPLTISIDKS
NNIYIFKTKISKTQLVNKLKALTRTKGKFNTRIFIKADQNLQYGEIAKLLAEITSAGFTKVALITDNCNEHK
>Mature_152_residues
MDNNTINAISNVFAKKRSKRALISNINVTPLVDVMLVLLIVFMVTSPMLTLGVNINLPKTSASQPLSEQSEPLTISIDKS
NNIYIFKTKISKTQLVNKLKALTRTKGKFNTRIFIKADQNLQYGEIAKLLAEITSAGFTKVALITDNCNEHK

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=131, Percent_Identity=37.4045801526718, Blast_Score=94, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400
- InterPro:   IPR014170 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16852; Mature: 16852

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNTINAISNVFAKKRSKRALISNINVTPLVDVMLVLLIVFMVTSPMLTLGVNINLPKT
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
SASQPLSEQSEPLTISIDKSNNIYIFKTKISKTQLVNKLKALTRTKGKFNTRIFIKADQN
CCCCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCC
LQYGEIAKLLAEITSAGFTKVALITDNCNEHK
CCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MDNNTINAISNVFAKKRSKRALISNINVTPLVDVMLVLLIVFMVTSPMLTLGVNINLPKT
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
SASQPLSEQSEPLTISIDKSNNIYIFKTKISKTQLVNKLKALTRTKGKFNTRIFIKADQN
CCCCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCC
LQYGEIAKLLAEITSAGFTKVALITDNCNEHK
CCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]