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The map label for this gene is fabD [H]

Identifier: 189183500

GI number: 189183500

Start: 606771

End: 607709

Strand: Direct

Name: fabD [H]

Synonym: OTT_0593

Alternate gene names: 189183500

Gene position: 606771-607709 (Clockwise)

Preceding gene: 189183498

Following gene: 189183503

Centisome position: 30.2

GC content: 32.91

Gene sequence:

>939_bases
ATGTATACAGTATTTGTTTTTCCTGGTCAAGGAGTACAATTTGTTGGTATGGGAAAAGACTTATATGATAATTTTCCTGT
AGCTAGAGATGTTTTTCATGAGGTAAACGATATTATTGCAGAAAAATTAACGGATATTATATTTAATGGTCCTATCAGTA
CTCTAACATTAACTAAGAATGCTCAACTAGCAATTATGGCAGTTTCAATGGCAACAATTAGAGTGTTAGAGCAACAAGCT
GCTATGAAATGTTATCAAATAGCAGATTATGTAGCTGGACATTCTTTGGGTGAATACAGCGCACTGTGTGCAGCTGGTGC
TTTATCATTAGATGAAGTTACAAAGATACTTAAGGTTAGAGCTAATGCTATGCATGCTGTAGCATCTAGATGTGATGGTA
GTATGGCTGCTTGTCTTGGTGTTACCATGGAAGAATTAAATCCAATTCTTGACTATTGTTCCACTATAGGAGTCTGCGAA
ATTGCTAATGACAATATATTGGGACAAATAGTTATTAGTGGTCATACTACTGCAATTAACTTAGCAATGAATATGTTGCG
TGCTCAAGGCAAGAAAGCTATCAAATTAAACGTAAGTGGTCCTTTTCATTGTTCACTAATGGCAAAGGCTACAAGCATAT
TTAGGCAAGCTATTGATAAAGTAAATATTAACCCTACCAAAATGATTATTGTTGCTAATTACAGCGCTAATATTGTTACT
ACGCCTATTGATATTAAAAATTGCCTAATAAGACAGATTGAAGGGAAAGTAAGGTGGAGAGAAACTTTAGATTTACTACA
ACAAAAAAATGTTAGTAAACTAATTGAAATAGGTCCTGGCAAAGTTTTAATTAATCTAGCAAAAAAAGGGCAGTATACTT
TTAAATGTAGTAGCATCAATTCAATATTTGAAATTGATGCTTTCTTAAATAATATATAG

Upstream 100 bases:

>100_bases
GAGTACAATAAATAAATATTGATAATAACAGTAAAAAAGGTTAACTTAATGATTTTCATATTTAATATCCAACTCTAGGA
ATATATACAAAAGAATATCT

Downstream 100 bases:

>100_bases
CATTGTTTTAATTGAAAATTGAAGCATAAAAATTATATTGCTATAACTTAAACTTACGCAAAAACAATAAAAAGCGTCTA
GAATCTAAGCCTCAGTTTAT

Product: malonyl CoA-acyl carrier protein transacylase

Products: NA

Alternate protein names: MCT [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MYTVFVFPGQGVQFVGMGKDLYDNFPVARDVFHEVNDIIAEKLTDIIFNGPISTLTLTKNAQLAIMAVSMATIRVLEQQA
AMKCYQIADYVAGHSLGEYSALCAAGALSLDEVTKILKVRANAMHAVASRCDGSMAACLGVTMEELNPILDYCSTIGVCE
IANDNILGQIVISGHTTAINLAMNMLRAQGKKAIKLNVSGPFHCSLMAKATSIFRQAIDKVNINPTKMIIVANYSANIVT
TPIDIKNCLIRQIEGKVRWRETLDLLQQKNVSKLIEIGPGKVLINLAKKGQYTFKCSSINSIFEIDAFLNNI

Sequences:

>Translated_312_residues
MYTVFVFPGQGVQFVGMGKDLYDNFPVARDVFHEVNDIIAEKLTDIIFNGPISTLTLTKNAQLAIMAVSMATIRVLEQQA
AMKCYQIADYVAGHSLGEYSALCAAGALSLDEVTKILKVRANAMHAVASRCDGSMAACLGVTMEELNPILDYCSTIGVCE
IANDNILGQIVISGHTTAINLAMNMLRAQGKKAIKLNVSGPFHCSLMAKATSIFRQAIDKVNINPTKMIIVANYSANIVT
TPIDIKNCLIRQIEGKVRWRETLDLLQQKNVSKLIEIGPGKVLINLAKKGQYTFKCSSINSIFEIDAFLNNI
>Mature_312_residues
MYTVFVFPGQGVQFVGMGKDLYDNFPVARDVFHEVNDIIAEKLTDIIFNGPISTLTLTKNAQLAIMAVSMATIRVLEQQA
AMKCYQIADYVAGHSLGEYSALCAAGALSLDEVTKILKVRANAMHAVASRCDGSMAACLGVTMEELNPILDYCSTIGVCE
IANDNILGQIVISGHTTAINLAMNMLRAQGKKAIKLNVSGPFHCSLMAKATSIFRQAIDKVNINPTKMIIVANYSANIVT
TPIDIKNCLIRQIEGKVRWRETLDLLQQKNVSKLIEIGPGKVLINLAKKGQYTFKCSSINSIFEIDAFLNNI

Specific function: Fatty acid biosynthesis. [C]

COG id: COG0331

COG function: function code I; (acyl-carrier-protein) S-malonyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fabD family [H]

Homologues:

Organism=Homo sapiens, GI51243059, Length=296, Percent_Identity=30.4054054054054, Blast_Score=135, Evalue=7e-32,
Organism=Escherichia coli, GI1787334, Length=316, Percent_Identity=32.5949367088608, Blast_Score=155, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI71984332, Length=296, Percent_Identity=30.0675675675676, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17550940, Length=294, Percent_Identity=25.1700680272109, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24665753, Length=313, Percent_Identity=32.5878594249201, Blast_Score=139, Evalue=2e-33,

Paralogues:

None

Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001227
- InterPro:   IPR014043
- InterPro:   IPR016035
- InterPro:   IPR004410
- InterPro:   IPR016036 [H]

Pfam domain/function: PF00698 Acyl_transf_1 [H]

EC number: =2.3.1.39 [H]

Molecular weight: Translated: 34026; Mature: 34026

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTVFVFPGQGVQFVGMGKDLYDNFPVARDVFHEVNDIIAEKLTDIIFNGPISTLTLTKN
CEEEEEECCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
AQLAIMAVSMATIRVLEQQAAMKCYQIADYVAGHSLGEYSALCAAGALSLDEVTKILKVR
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHH
ANAMHAVASRCDGSMAACLGVTMEELNPILDYCSTIGVCEIANDNILGQIVISGHTTAIN
HHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCEEEECCCCEEEEEEEECCCHHHH
LAMNMLRAQGKKAIKLNVSGPFHCSLMAKATSIFRQAIDKVNINPTKMIIVANYSANIVT
HHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEE
TPIDIKNCLIRQIEGKVRWRETLDLLQQKNVSKLIEIGPGKVLINLAKKGQYTFKCSSIN
CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCEEEEECCCC
SIFEIDAFLNNI
HHHHHHHHHHCC
>Mature Secondary Structure
MYTVFVFPGQGVQFVGMGKDLYDNFPVARDVFHEVNDIIAEKLTDIIFNGPISTLTLTKN
CEEEEEECCCCEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
AQLAIMAVSMATIRVLEQQAAMKCYQIADYVAGHSLGEYSALCAAGALSLDEVTKILKVR
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHH
ANAMHAVASRCDGSMAACLGVTMEELNPILDYCSTIGVCEIANDNILGQIVISGHTTAIN
HHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCEEEECCCCEEEEEEEECCCHHHH
LAMNMLRAQGKKAIKLNVSGPFHCSLMAKATSIFRQAIDKVNINPTKMIIVANYSANIVT
HHHHHHHHCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEE
TPIDIKNCLIRQIEGKVRWRETLDLLQQKNVSKLIEIGPGKVLINLAKKGQYTFKCSSIN
CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCEEEEECCCC
SIFEIDAFLNNI
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759840; 9534248; 9384377 [H]