| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183487
Identifier: 189183487
GI number: 189183487
Start: 593930
End: 594367
Strand: Direct
Name: 189183487
Synonym: OTT_0580
Alternate gene names: NA
Gene position: 593930-594367 (Clockwise)
Preceding gene: 189183486
Following gene: 189183491
Centisome position: 29.56
GC content: 28.77
Gene sequence:
>438_bases TTGCCTATAGAACATCTTATAATCAATAATAAAGGTGAAATAATGTTAGTTAAAATTACTAAAGGCAATAAAAGCGATCT ATCTATAGCTTCAGTTATTTCTGAAGGCCTATCTGGTAAATTGTTTGGTGATAAAGCTTACATATCTAAAAAGTTATTTC ATCAACTGTTGTCAAATGGTCTACGTTTATTTACTAATCTTCGTAAAGATATGCAAACATATTTATTGGACATACAAGAT AATCAGTTATTAAATAAACGTTCCTTAATTGAATCTGTCTTTAATGTACTAAAAAAATATATGCATTTAGAGCATACTAG ACATCGCTCCCCTATTAATTTCCTTGTTCATATAATTGCTTCTTTTGCTAGTTATTCTATCTCCAAACTTAATCCCTACC TTATCTCCTCTTCTTTTTCTTCTAACTCCTTATCCTAA
Upstream 100 bases:
>100_bases CTATGAAGAGCAAGGATTATATACTTTTTTCTATGCTCAAACTTCATTATAAATGACTATACATCTTCATACTGATACTA TCTGCCTTAGAAGACCAATT
Downstream 100 bases:
>100_bases ATTGACGTTTAGAAGGTCATTCTTTAAGGCCTCAATGTCCTTAACATAACTGCCCCATTCTTGTCGAAAGCTATTCCATT TTAAGCCATGAAGACGAATG
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MPIEHLIINNKGEIMLVKITKGNKSDLSIASVISEGLSGKLFGDKAYISKKLFHQLLSNGLRLFTNLRKDMQTYLLDIQD NQLLNKRSLIESVFNVLKKYMHLEHTRHRSPINFLVHIIASFASYSISKLNPYLISSSFSSNSLS
Sequences:
>Translated_145_residues MPIEHLIINNKGEIMLVKITKGNKSDLSIASVISEGLSGKLFGDKAYISKKLFHQLLSNGLRLFTNLRKDMQTYLLDIQD NQLLNKRSLIESVFNVLKKYMHLEHTRHRSPINFLVHIIASFASYSISKLNPYLISSSFSSNSLS >Mature_144_residues PIEHLIINNKGEIMLVKITKGNKSDLSIASVISEGLSGKLFGDKAYISKKLFHQLLSNGLRLFTNLRKDMQTYLLDIQDN QLLNKRSLIESVFNVLKKYMHLEHTRHRSPINFLVHIIASFASYSISKLNPYLISSSFSSNSLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16481; Mature: 16350
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIEHLIINNKGEIMLVKITKGNKSDLSIASVISEGLSGKLFGDKAYISKKLFHQLLSNG CCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LRLFTNLRKDMQTYLLDIQDNQLLNKRSLIESVFNVLKKYMHLEHTRHRSPINFLVHIIA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SFASYSISKLNPYLISSSFSSNSLS HHHHHHHHHCCHHHEECCCCCCCCC >Mature Secondary Structure PIEHLIINNKGEIMLVKITKGNKSDLSIASVISEGLSGKLFGDKAYISKKLFHQLLSNG CCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LRLFTNLRKDMQTYLLDIQDNQLLNKRSLIESVFNVLKKYMHLEHTRHRSPINFLVHIIA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SFASYSISKLNPYLISSSFSSNSLS HHHHHHHHHCCHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA