| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183483
Identifier: 189183483
GI number: 189183483
Start: 588215
End: 588916
Strand: Direct
Name: 189183483
Synonym: OTT_0576
Alternate gene names: NA
Gene position: 588215-588916 (Clockwise)
Preceding gene: 189183474
Following gene: 189183484
Centisome position: 29.28
GC content: 33.9
Gene sequence:
>702_bases ATGTCTGAAGTGTTTTTTAATGGACCAGCTGGTAGAATTGAGGGAGAATATGTTCAATCGGATGATTCAAAAGCTCCAGT AGCTTTAGTATTACATCCTCATTTACCACCAGACTTTTTTCAAGGCAACATGAACCATGATGTTATAATCTGCTTGCACA CTCTTTTAGTAAAAAATGGGTTTTCAGCATTGAAGATTAACTTTAGAGGTATAGGCAAATCTCAAGGTGCTTTTGATAAT GGAGTTGGGGAATTAATGGATGCAGCTACTGCTTTAGATTGGCTGCAATTACATAATCCTTCAAGTATAGATTACTGGGT AGCAGGTTTTTCATTTGGAGCTTGGATATGTATGCAATTAATTATGCGAAGGCCAGAAGTAAATAATTTTATTGCAGTAT CACCTCCTACTAATAAATTTGATTTTTCATTTTTATCTCCTTGCCCAATACCTGGTTTGATAGTTCAGGGAGAGCAAGAT AGTATAGTACCAGAAGAATCTGTACTAGAATTAGTTAACAAGTTATCAAGGCAAAAGAGTATTGATGTTGAATATAAATC TTTGAGTGGTGCTGATCACTTTTTTCGAGGAAAGCTAGATGAGCTAGCTAATGCAGTAGATGAGTATATTAAACAAAATA ATAGATTATCTACAGGTAAAAAAAGCACCTCTAAGAAACATCAAAATAAGTTATTACTATAA
Upstream 100 bases:
>100_bases TTGAAATATTTTTTATCATATGCTTTAGTATAGCTTAATTAGATTTTTTATTATCTAATACATTACTATTTTAGTCAACT ATTATTAAGTACAAAATATT
Downstream 100 bases:
>100_bases ACTTAAAGTCATGATAAGATGAATTATATGGCGGATAGAGTGGGATTCGAACCCACGGTACAATTTCTTGTAGCGCCGGT TTTCAAGACCGGTTCCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MSEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNGFSALKINFRGIGKSQGAFDN GVGELMDAATALDWLQLHNPSSIDYWVAGFSFGAWICMQLIMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQD SIVPEESVLELVNKLSRQKSIDVEYKSLSGADHFFRGKLDELANAVDEYIKQNNRLSTGKKSTSKKHQNKLLL
Sequences:
>Translated_233_residues MSEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNGFSALKINFRGIGKSQGAFDN GVGELMDAATALDWLQLHNPSSIDYWVAGFSFGAWICMQLIMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQD SIVPEESVLELVNKLSRQKSIDVEYKSLSGADHFFRGKLDELANAVDEYIKQNNRLSTGKKSTSKKHQNKLLL >Mature_232_residues SEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNGFSALKINFRGIGKSQGAFDNG VGELMDAATALDWLQLHNPSSIDYWVAGFSFGAWICMQLIMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQDS IVPEESVLELVNKLSRQKSIDVEYKSLSGADHFFRGKLDELANAVDEYIKQNNRLSTGKKSTSKKHQNKLLL
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 25893; Mature: 25762
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNG CCCEEECCCCCCCCCCEECCCCCCCCEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHCC FSALKINFRGIGKSQGAFDNGVGELMDAATALDWLQLHNPSSIDYWVAGFSFGAWICMQL CCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH IMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQDSIVPEESVLELVNKLSRQKS HHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHC IDVEYKSLSGADHFFRGKLDELANAVDEYIKQNNRLSTGKKSTSKKHQNKLLL CCEEECCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure SEVFFNGPAGRIEGEYVQSDDSKAPVALVLHPHLPPDFFQGNMNHDVIICLHTLLVKNG CCEEECCCCCCCCCCEECCCCCCCCEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHCC FSALKINFRGIGKSQGAFDNGVGELMDAATALDWLQLHNPSSIDYWVAGFSFGAWICMQL CCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH IMRRPEVNNFIAVSPPTNKFDFSFLSPCPIPGLIVQGEQDSIVPEESVLELVNKLSRQKS HHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHC IDVEYKSLSGADHFFRGKLDELANAVDEYIKQNNRLSTGKKSTSKKHQNKLLL CCEEECCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]