Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189183449
Identifier: 189183449
GI number: 189183449
Start: 560985
End: 561500
Strand: Direct
Name: 189183449
Synonym: OTT_0542
Alternate gene names: NA
Gene position: 560985-561500 (Clockwise)
Preceding gene: 189183445
Following gene: 189183450
Centisome position: 27.92
GC content: 40.5
Gene sequence:
>516_bases ATGGATAAAACTTTAGACACTTATCTCAGCCTTTGTACAGAGGTTTACGATTTAAGCAAGCCGAATCCACCAGAAGATGC TTATGCTTTTTATTGTGACTATGCCATGAGAGCGAACTGTCCTATTTTAGAGCCGATGTGTGGTACAGGCCGTTTTTTAC TGCCATTACTTGCAGAGGGATTCAATGTACATGGCTTTCATGCAAGCAGCCATATGCTTAAAGTCTTGCATGCTAAAGCC AAAACTAAAAATCTTGACGCTACGGTATGGAAAGGCTTTGTTGAAGATTTAAAACGTCCAGAAAAATACAATTTGATTTT TATTCCCAGTGTGTCTTTCTGTTTAATCATCGATCCTGTGCAGGTAGAGAAGTTACTTAAAGCCATTTATGACCACTTAG CTGACGGTGGTATTTTCTTGTTTGAAGCAGAAACTCTGCACGCAGTGCCTCAAGCAGGTATATGGCGTGGCTCGGTATGG CCCAAATCAAATGGCCAAAAAATTATCCTAAGCTAG
Upstream 100 bases:
>100_bases GCCTGGGCATTGTGGAAAGCAACGTTTGAATTGTGCCAAATTGCAGATAAAAACATTCCTGAGGCTGGTTTTCAAAAAAG AATTATTGATGAGTTTATAA
Downstream 100 bases:
>100_bases CTTACCATGATGCAAGACAATATCTGTACCAGCCTTTGCAAATATGAGCTGATGGAGGTGGGAAAGATTATCCATACAGA AATTGAAAAGCTGAAAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; UbiE/COQ5 Family Methlytransferase; Sam Dependent Methyltransferase
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MDKTLDTYLSLCTEVYDLSKPNPPEDAYAFYCDYAMRANCPILEPMCGTGRFLLPLLAEGFNVHGFHASSHMLKVLHAKA KTKNLDATVWKGFVEDLKRPEKYNLIFIPSVSFCLIIDPVQVEKLLKAIYDHLADGGIFLFEAETLHAVPQAGIWRGSVW PKSNGQKIILS
Sequences:
>Translated_171_residues MDKTLDTYLSLCTEVYDLSKPNPPEDAYAFYCDYAMRANCPILEPMCGTGRFLLPLLAEGFNVHGFHASSHMLKVLHAKA KTKNLDATVWKGFVEDLKRPEKYNLIFIPSVSFCLIIDPVQVEKLLKAIYDHLADGGIFLFEAETLHAVPQAGIWRGSVW PKSNGQKIILS >Mature_171_residues MDKTLDTYLSLCTEVYDLSKPNPPEDAYAFYCDYAMRANCPILEPMCGTGRFLLPLLAEGFNVHGFHASSHMLKVLHAKA KTKNLDATVWKGFVEDLKRPEKYNLIFIPSVSFCLIIDPVQVEKLLKAIYDHLADGGIFLFEAETLHAVPQAGIWRGSVW PKSNGQKIILS
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19205; Mature: 19205
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKTLDTYLSLCTEVYDLSKPNPPEDAYAFYCDYAMRANCPILEPMCGTGRFLLPLLAEG CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHCCCCCCCCCCCCCHHHHHHHHCC FNVHGFHASSHMLKVLHAKAKTKNLDATVWKGFVEDLKRPEKYNLIFIPSVSFCLIIDPV CCEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECHH QVEKLLKAIYDHLADGGIFLFEAETLHAVPQAGIWRGSVWPKSNGQKIILS HHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure MDKTLDTYLSLCTEVYDLSKPNPPEDAYAFYCDYAMRANCPILEPMCGTGRFLLPLLAEG CCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHCCCCCCCCCCCCCHHHHHHHHCC FNVHGFHASSHMLKVLHAKAKTKNLDATVWKGFVEDLKRPEKYNLIFIPSVSFCLIIDPV CCEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEEECHH QVEKLLKAIYDHLADGGIFLFEAETLHAVPQAGIWRGSVWPKSNGQKIILS HHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA