Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189183441
Identifier: 189183441
GI number: 189183441
Start: 556452
End: 556916
Strand: Direct
Name: 189183441
Synonym: OTT_0534
Alternate gene names: NA
Gene position: 556452-556916 (Clockwise)
Preceding gene: 189183440
Following gene: 189183442
Centisome position: 27.7
GC content: 39.57
Gene sequence:
>465_bases ATGGGCACGAAGAATAATATCCACGTTTTGAGTCGAGGCGTGATAATAGATCAAGACCATATTTTGCTTTGCAAAACACT TGACCTGCCAATCAGTTTTTATTTTCTTCCAGGTGGTCATGTTGAGCATGGGGAATCGGTAGAAAGATCGCTTCTTCGTG AACTAATGGAAGAAACTGGAGCTCATTGCAAGATCAAGAGATTTTTAGGATGTCTAGAATACAGCTTCGAACCAGGGCAT AGCAGTATCTGTCACAACCATGAATATAATTTTATTTTTGAGGCTGAATCAGAATCTTTGAAAAGCAATCATAAAATTCC ACAGCTTGAAAAGCATATTGAATTAATCTGGGTTCCCTTGCATCAATTATCTGAGATTGATTTTAGAGCCGAACCCTTGA GAGAACTCGTGCCTCAGTGGCTGAAAACGCTGGCTTCAGATGTATTTAGGAGCGTGATGATATGA
Upstream 100 bases:
>100_bases ACAGAGGATGGTATTGCTTCGCTGTGATCTTCCATTTGGCAGCGATATGGCGATGAATGGAAAATGATATTTCATCAAGG CACGAAATGTGAGGTTGAAG
Downstream 100 bases:
>100_bases CACAACCAACAACCATCATCTATTTAACAGGCAAGCCTAGGGTCGGCAAATACAGCATTGCCAAGGAATTAGCTGCAAAG TATGGTTTTATCGTATGCGA
Product: MutT/nudix family protein
Products: NA
Alternate protein names: ADP-Ribose Pyrophosphatase; NUDIX Hydrolase
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MGTKNNIHVLSRGVIIDQDHILLCKTLDLPISFYFLPGGHVEHGESVERSLLRELMEETGAHCKIKRFLGCLEYSFEPGH SSICHNHEYNFIFEAESESLKSNHKIPQLEKHIELIWVPLHQLSEIDFRAEPLRELVPQWLKTLASDVFRSVMI
Sequences:
>Translated_154_residues MGTKNNIHVLSRGVIIDQDHILLCKTLDLPISFYFLPGGHVEHGESVERSLLRELMEETGAHCKIKRFLGCLEYSFEPGH SSICHNHEYNFIFEAESESLKSNHKIPQLEKHIELIWVPLHQLSEIDFRAEPLRELVPQWLKTLASDVFRSVMI >Mature_153_residues GTKNNIHVLSRGVIIDQDHILLCKTLDLPISFYFLPGGHVEHGESVERSLLRELMEETGAHCKIKRFLGCLEYSFEPGHS SICHNHEYNFIFEAESESLKSNHKIPQLEKHIELIWVPLHQLSEIDFRAEPLRELVPQWLKTLASDVFRSVMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17829; Mature: 17698
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTKNNIHVLSRGVIIDQDHILLCKTLDLPISFYFLPGGHVEHGESVERSLLRELMEETG CCCCCCEEEEECCEEECCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCC AHCKIKRFLGCLEYSFEPGHSSICHNHEYNFIFEAESESLKSNHKIPQLEKHIELIWVPL CCEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCHHHHHHHEEEECH HQLSEIDFRAEPLRELVPQWLKTLASDVFRSVMI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GTKNNIHVLSRGVIIDQDHILLCKTLDLPISFYFLPGGHVEHGESVERSLLRELMEETG CCCCCEEEEECCEEECCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCC AHCKIKRFLGCLEYSFEPGHSSICHNHEYNFIFEAESESLKSNHKIPQLEKHIELIWVPL CCEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCHHHHHHHEEEECH HQLSEIDFRAEPLRELVPQWLKTLASDVFRSVMI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA