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The map label for this gene is traH [H]

Identifier: 189183400

GI number: 189183400

Start: 510202

End: 511503

Strand: Direct

Name: traH [H]

Synonym: OTT_0493

Alternate gene names: 189183400

Gene position: 510202-511503 (Clockwise)

Preceding gene: 189183399

Following gene: 189183401

Centisome position: 25.4

GC content: 35.71

Gene sequence:

>1302_bases
ATGAGCATAAGAATCAGAGTTTATGTTATTGCAGCATTATTTTCGCTACAAGCTCCAGTATCACTAGCTTGGAATATCGA
AAACGTATTTCAAGGAATGAGTGTTAATGTTACCAGATCTGGATCATATCAAGATCAAGCGGCTGGATATTATGCAGCTG
GTGGATTGTCTGCTCGAACAAGCCAAACATCCTTTCAGCCATTTGCTATAACTTCACCATCTTTAAACATGAGCTGTAGC
GGTATTGACGCATATCTTGGTAGCTTCTCTGTTATTTCTGGAGAAGAATTAGTTCAACTAATGAAAAACATTGGTTCTCA
AGCTAAAGTTTATGCATTTTCATTAGGATTAAAAACATTTGCTCCACAGATCGAAAATGCTCTTAAGGACTTGCGTAATC
TAGCAATGGAGATGAATCAATTTGCCAAAGGAGATTGTGAATTAACAAAAGCATTATTTGCTACAGCTTTACCAAAGAAC
TGGGCTATGAGAGAAGCTGTTTGCCGTGATATACAGTCACAAAGTGGATTTGATTATTTTGCAGCTGGTAAAAAATGTCG
TAATTATTTAGATCAAAAACAAGCTCTGCGACAAGCACAAAATAAGGATTCAGAGTTAATGCTTGATGATTATAACATCT
TCACTAAAGCAGCAGCAAAGGTTGGAATACCATCAGATATGCGTGATTCAATCATGTCTATGACTGGCACTATCGTGGTT
ACAAACAATAATGTACACTTTTATGACTCCTTAGCTCAGGACGAAAAAAGTTGGATTAGTCATTTAAAAGGCGGAGAATC
AGCCTCGATTTACAGCTGTGATAGTGTCAGTTGCTTGCATCCAAGTCGACAACGAAATATCACAATATCTCCAGAGCAGT
CTTATGGAGGTAGAGCTAAGCAAAAATTGACTGATCTAAAAATTAAGTTTGATAATAATTATGAATTCACTAACTCTGAA
ATAGGCTTTTTATCTTCAATTGGAGATATATTTCCGATTTATGATTATATCACATTAGAAGCTATTTCTGGAGTAACAAT
CTTAGATAGCTCATCAGAATTAATAGCCAGCTATACATTAGTTCAGCATTTGAAGGAAGTAATCACCGAAATACGTAGAG
CCGTTACTTCACTAGGTGCTAAGCAAGTTTCGAATGAACATTTAGAAAGATATTTGAAGGAATTGAATCGAGTTCAACTT
TTTGCAAATGAAAAATGGACTAGCCTACAAACAGATGCAAGTCGAATAGATAAAAGGGCTAGATTAATAGAGCAGCATTT
AATAGCGAAGGAGAAAAGTTAA

Upstream 100 bases:

>100_bases
TAAAAAAAATATATGCAGTAGCTAGAGGCATAATTTCTGAAGATAAAATTATCGACAATATTCTAGCAATCGATAGATAT
TATCATAAATTGGAGACTAG

Downstream 100 bases:

>100_bases
TGGATTACGTAATATACACATTTGGTGGTGGAGATCTGTTATGGCATGTGTTTAATGGCATAGGAATAGTCTTTGCTTCA
AATAGCGAATACTTCACTCC

Product: putative conjugative transfer protein TraH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MSIRIRVYVIAALFSLQAPVSLAWNIENVFQGMSVNVTRSGSYQDQAAGYYAAGGLSARTSQTSFQPFAITSPSLNMSCS
GIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKN
WAMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVV
TNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHPSRQRNITISPEQSYGGRAKQKLTDLKIKFDNNYEFTNSE
IGFLSSIGDIFPIYDYITLEAISGVTILDSSSELIASYTLVQHLKEVITEIRRAVTSLGAKQVSNEHLERYLKELNRVQL
FANEKWTSLQTDASRIDKRARLIEQHLIAKEKS

Sequences:

>Translated_433_residues
MSIRIRVYVIAALFSLQAPVSLAWNIENVFQGMSVNVTRSGSYQDQAAGYYAAGGLSARTSQTSFQPFAITSPSLNMSCS
GIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKN
WAMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVV
TNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHPSRQRNITISPEQSYGGRAKQKLTDLKIKFDNNYEFTNSE
IGFLSSIGDIFPIYDYITLEAISGVTILDSSSELIASYTLVQHLKEVITEIRRAVTSLGAKQVSNEHLERYLKELNRVQL
FANEKWTSLQTDASRIDKRARLIEQHLIAKEKS
>Mature_432_residues
SIRIRVYVIAALFSLQAPVSLAWNIENVFQGMSVNVTRSGSYQDQAAGYYAAGGLSARTSQTSFQPFAITSPSLNMSCSG
IDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKNW
AMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVVT
NNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHPSRQRNITISPEQSYGGRAKQKLTDLKIKFDNNYEFTNSEI
GFLSSIGDIFPIYDYITLEAISGVTILDSSSELIASYTLVQHLKEVITEIRRAVTSLGAKQVSNEHLERYLKELNRVQLF
ANEKWTSLQTDASRIDKRARLIEQHLIAKEKS

Specific function: Involved in pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010927 [H]

Pfam domain/function: PF06122 TraH [H]

EC number: NA

Molecular weight: Translated: 48191; Mature: 48060

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRIRVYVIAALFSLQAPVSLAWNIENVFQGMSVNVTRSGSYQDQAAGYYAAGGLSART
CCEEEEHHHHHHHHHHCCCCEEEECHHHHHCCCEEEEEECCCCCHHCCCEEEECCCCCCC
SQTSFQPFAITSPSLNMSCSGIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTF
CCCCCCCEEEECCCCCCCCCHHHHHHCCCCEECHHHHHHHHHHCCCCCEEEEEEHHHHHH
APQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKNWAMREAVCRDIQSQSGFDYF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHH
AAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVV
HCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHCCEEEE
TNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHPSRQRNITISPEQSYGGRAK
ECCCEEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCHHH
QKLTDLKIKFDNNYEFTNSEIGFLSSIGDIFPIYDYITLEAISGVTILDSSSELIASYTL
HHHEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHH
VQHLKEVITEIRRAVTSLGAKQVSNEHLERYLKELNRVQLFANEKWTSLQTDASRIDKRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHH
RLIEQHLIAKEKS
HHHHHHHHHCCCC
>Mature Secondary Structure 
SIRIRVYVIAALFSLQAPVSLAWNIENVFQGMSVNVTRSGSYQDQAAGYYAAGGLSART
CEEEEHHHHHHHHHHCCCCEEEECHHHHHCCCEEEEEECCCCCHHCCCEEEECCCCCCC
SQTSFQPFAITSPSLNMSCSGIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTF
CCCCCCCEEEECCCCCCCCCHHHHHHCCCCEECHHHHHHHHHHCCCCCEEEEEEHHHHHH
APQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPKNWAMREAVCRDIQSQSGFDYF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHH
AAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSDMRDSIMSMTGTIVV
HCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHCCEEEE
TNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHPSRQRNITISPEQSYGGRAK
ECCCEEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCHHH
QKLTDLKIKFDNNYEFTNSEIGFLSSIGDIFPIYDYITLEAISGVTILDSSSELIASYTL
HHHEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHH
VQHLKEVITEIRRAVTSLGAKQVSNEHLERYLKELNRVQLFANEKWTSLQTDASRIDKRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHH
RLIEQHLIAKEKS
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817; 2656408 [H]