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The map label for this gene is traN [H]

Identifier: 189183398

GI number: 189183398

Start: 508304

End: 509503

Strand: Direct

Name: traN [H]

Synonym: OTT_0491

Alternate gene names: 189183398

Gene position: 508304-509503 (Clockwise)

Preceding gene: 189183397

Following gene: 189183399

Centisome position: 25.3

GC content: 34.42

Gene sequence:

>1200_bases
ATGGAATTTGCAAAAAAAGAAATAGTGAAGAATCATAGCAATTGGCTTAAGAGTCGTAGCGATGTCTATGATAAATCAGG
GGCGCAAATATACTGCCTAGTAGATGATCCCGAAGCAATTGAAAGACAAATGAAAATGGCTATTGCTAATAGGCTCGGTG
TACCTACACAGCATATTGGTAGAAATTTTTTATTACATGAAAAAAATGAAATATGTATACTTGAATATGACTACAGAGAT
AAGACTCAAGAACTAAGGGAAGTAGCAGAATATTGGAAAGTTTTAAACCCTGAACTTGAGCAATTAACAGAAAGTAACGA
ATGCTATGAGGTCAATCGAATCAACTATGATGGTGGTGATAGAGTATTTTTTGACAAGTTTAGAGTTAATCGTCCATATT
GGAAACAAAAGATTGTTTTTTCTTGTACTAGCGATCCAAAAGATGGTTGCAAACACCTTAAAATTCAAAATTGCGAATTA
AAAAATAGCACTTGCCAAAAATCGGTAGCAAATATTTGTTTACTATGGCAGCACGATTATAGCTGTTCAACTGAGAAGCA
AACAATGCTACACTCATCATTGCGTAATAACTCAATCTTTTGTTTAGGAGGTAATTGCAACACTCCAACTATTATACCAA
ACAGGGATATAGCTAAAGTAGCTCATCTAGCGATGCTAAATCAGATGAGCAAAGACATTAAAACAAATCCCGTTTCTGTA
TTTTCAGGTAAACATCGCAAATGCAAAAAAGATGTATTTAGTTTTTTGAATTGCTGCTCTTCAATGACTGGCTGGGGGCG
TGATATAGGCTTATCACAATGCAAATCTAAAGAACAAGAATTAGCTCTATATAGAAAAAAAGGTTACTGCTACTATATTG
GAACCTACTGTTCTTCAAGAATTCCGATATTAGGTATTTGCTTAGCCAGAAAGTCTACTTATTGCTGCTTTCAGTCGAAA
CTGGCAAGAATTTTTCAGGAAGAAGCAAGAAAACAGCTAAAAATAGACTTTGGAACACCTGAATGTCCAAAGTGTAGAGG
CCTTACTGTTAAGGAATTACAAAAAGTTGATTTCACTAAAATCAATATGGATGAACTATTTGGTGATATACTCACTAAGG
CTCAAAACAGCATGAACAAAGACATTATTGCAGGAATCAAAGATAAAGTTCATCGTATGCAACAAAGTCAGTCTAAATGA

Upstream 100 bases:

>100_bases
AAAGCTGTACTGAAGGAGTAAGTTCAATATTGAACTTATTCGAGAATTAAATGTTGAGTGCAGATTAGAGAATGTATGGC
TTCCATGGCAAAGCCGGCAA

Downstream 100 bases:

>100_bases
GCAGATTACTAATGTTTATGATATTAATTAGTCATTTATCCACTGTTGATGCTTCACCAACAGGATTTCTATGGTATAAT
GATAAACATGATCATGAGCT

Product: putative conjugative transfer protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MEFAKKEIVKNHSNWLKSRSDVYDKSGAQIYCLVDDPEAIERQMKMAIANRLGVPTQHIGRNFLLHEKNEICILEYDYRD
KTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFRVNRPYWKQKIVFSCTSDPKDGCKHLKIQNCEL
KNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSV
FSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYCCFQSK
LARIFQEEARKQLKIDFGTPECPKCRGLTVKELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQSQSK

Sequences:

>Translated_399_residues
MEFAKKEIVKNHSNWLKSRSDVYDKSGAQIYCLVDDPEAIERQMKMAIANRLGVPTQHIGRNFLLHEKNEICILEYDYRD
KTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFRVNRPYWKQKIVFSCTSDPKDGCKHLKIQNCEL
KNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSV
FSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYCCFQSK
LARIFQEEARKQLKIDFGTPECPKCRGLTVKELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQSQSK
>Mature_399_residues
MEFAKKEIVKNHSNWLKSRSDVYDKSGAQIYCLVDDPEAIERQMKMAIANRLGVPTQHIGRNFLLHEKNEICILEYDYRD
KTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGDRVFFDKFRVNRPYWKQKIVFSCTSDPKDGCKHLKIQNCEL
KNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSV
FSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYCCFQSK
LARIFQEEARKQLKIDFGTPECPKCRGLTVKELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQSQSK

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 46138; Mature: 46138

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFAKKEIVKNHSNWLKSRSDVYDKSGAQIYCLVDDPEAIERQMKMAIANRLGVPTQHIG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHC
RNFLLHEKNEICILEYDYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGD
CCCEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCC
RVFFDKFRVNRPYWKQKIVFSCTSDPKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDY
EEEEEHHHCCCCHHHCEEEEEECCCCHHHHHCCEEECCCCCCHHHHHHHHHEEEEEECCC
SCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSV
CCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
FSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSR
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECHHCCC
IPILGICLARKSTYCCFQSKLARIFQEEARKQLKIDFGTPECPKCRGLTVKELQKVDFTK
CCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHCCCCC
INMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQSQSK
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEFAKKEIVKNHSNWLKSRSDVYDKSGAQIYCLVDDPEAIERQMKMAIANRLGVPTQHIG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHC
RNFLLHEKNEICILEYDYRDKTQELREVAEYWKVLNPELEQLTESNECYEVNRINYDGGD
CCCEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCC
RVFFDKFRVNRPYWKQKIVFSCTSDPKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDY
EEEEEHHHCCCCHHHCEEEEEECCCCHHHHHCCEEECCCCCCHHHHHHHHHEEEEEECCC
SCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSV
CCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
FSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSR
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECHHCCC
IPILGICLARKSTYCCFQSKLARIFQEEARKQLKIDFGTPECPKCRGLTVKELQKVDFTK
CCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHCCCCC
INMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQSQSK
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]