| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183380
Identifier: 189183380
GI number: 189183380
Start: 495501
End: 496007
Strand: Direct
Name: 189183380
Synonym: OTT_0473
Alternate gene names: NA
Gene position: 495501-496007 (Clockwise)
Preceding gene: 189183379
Following gene: 189183381
Centisome position: 24.66
GC content: 29.98
Gene sequence:
>507_bases GTGTTAAGGAATGAATTTATCGAGAAGGTAAAGCAAATTTCTAAAGAAAATCTAGTATTTATTGATGAGTCAGGAATAGA GGATAATGCTTGTAGAGAATATGGATGGAGTATAAAAGGTACTAGATGTTATGGCAATAAAGCTTATCAACATAAATCCA GGGTCAGTATGATAGCGGGGCTTTGTAATAATCAAATTATAGCACCAGTAATATTTGAAGGAAATTGTAATAAAGAAATA TTTACAACTTATGTAGAAACTATATTAATCAAAGAATTGCACCCTGGACAAATAGTAATTATGGATAATATCAACTTCCA TAAGAATAATACAATTAAAGTATTAATAGAATCGGTTGGCTGCAGTATTCTATTCTTACCTACATATAGTCCAGATTTAA ATCCTATAGAACATTATTGGTTTAAGATTAAGAACGAAATAAGAAAAGTTACTCCTCAATTCAAAGATATTAGCATGGCT GTAGCACACGTAATGCAGTTTATCTGA
Upstream 100 bases:
>100_bases ATACTAGGTAATAGATTACAAAGAACTAGAATAAATTATTATAGAAAACTACTAGGATACACTTATAAAAAAAACTCATT TTCATCCCAAAAGGGATATT
Downstream 100 bases:
>100_bases TTGTACCTATTTCCTACGTTATTGCTATATTCTAAGGCCATCAGCAACTGTTCCTCCAAATTAAGCTTATTTTTACGCCC ACCTTTTGATTTCTTAAGAC
Product: transposase
Products: NA
Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; Degenerate Transposase; ISHde6 Transposase OrfB; ISHde5 Transposase OrfA; Transposase Family Protein; Transposase IS; ISRin2 Transposase OrfB; ISSoc4 Transposase OrfAB; ISHde1 Transposase OrfB; Transposase And Inactivated Derivative; Transposase Fragment
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKEI FTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVGCSILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISMA VAHVMQFI
Sequences:
>Translated_168_residues MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKEI FTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVGCSILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISMA VAHVMQFI >Mature_168_residues MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKEI FTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVGCSILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISMA VAHVMQFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19416; Mature: 19416
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAG CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH LCNNQIIAPVIFEGNCNKEIFTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVG HHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCC CSILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISMAVAHVMQFI CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC >Mature Secondary Structure MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAG CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH LCNNQIIAPVIFEGNCNKEIFTTYVETILIKELHPGQIVIMDNINFHKNNTIKVLIESVG HHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCC CSILFLPTYSPDLNPIEHYWFKIKNEIRKVTPQFKDISMAVAHVMQFI CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA