| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183306
Identifier: 189183306
GI number: 189183306
Start: 418665
End: 419783
Strand: Direct
Name: 189183306
Synonym: OTT_0399
Alternate gene names: NA
Gene position: 418665-419783 (Clockwise)
Preceding gene: 189183304
Following gene: 189183307
Centisome position: 20.84
GC content: 31.19
Gene sequence:
>1119_bases ATGCGAATGACCCTAATAACAATTATAGCAGAAGGCGCTGAAACAGCATTGAGCTTACAGCAAGCAGGCATTAAAGGTAA TATCATTGCTAGTGCAGGAATTTCGAATTTGAGAAATTATTCACCATTTCCTGGTGAAAAAATCATCATTGCAGCAGATA ATGATAGCAAAAATTCTATAACTAATAATACTGTAATTAAAGCTGCAAAAACGTTAGAAATGAAGGGAGCGATAACTTGT ATAGTCAAACCACCAGAAAATGGTGATTTTAATAATCTGTTGCAAAGTTGTGGATACCAGTCAATTAGAGACATTATAGA ACCTGAAATTACTAAACTGACTAAGGCAGTTGAAACAACCAAACTTACTCAAACAGAAAATAATAGTATAGAAAAACAAA ATAATATTACGAATGTTAAAGAATTGTATAATAAATCGTCATCTCTATACTACTTTAAACAAGAAGAGGAAGCTAAGGTG GAAACGATAGTAGTGAATAAATATCTAGAAAACCATACAGAAATTTATAGTGCAAAAATCTTTAACAATTCTAATTTAAG GGCAAATATGGTTTTTGATGAAGAGACTCAAAAATCCTGGCCTGCACTCACTATTTTTGTTAAAAATGAAGCAGGTGAAA TTACTGGAGCTAAGATATTAACTCTGAATTCAAAAACATGTAATAAAGCTGATGTAGCTGAAAAATCTGTTGGTACAATT AGTGGCTCATTTGCTGAAATTGCTCAACAAAATTCAAAATACTCACCTGTAACAATCATTACAAAGGATATTGAAACAGC GTTAACCATTAGGCAAGCTGGAGTTGAAGGAAAAATCTTATGTGCAATTGAAGCCGAAAATTTGCAAAACTATAATCCTG GCCCAAAAGAAAAGATCATTCTAGCAGTTAAAAATGACGTAAATACTGAAAAAGCTGAAAAAGTTCTAGAGGATAAGGAA GCAGTAGTCTGTACAGTCAAAAATGACTTTAATAATGTATTAAAAACTCAAGGATTATATGCTGTTAGAAATATTATCAG CCCTGAAATAAGAAAACTTAATGAAAAAATTGAATCAATACAAACTAATATACAACCAGGATTATGTCTGAAAATTTAA
Upstream 100 bases:
>100_bases GCGATTATTCATACTATGAATAGTGTTAGCTAATATCTAAATTTTTAGAATAGATCCTTAGGTAAAATTAGCGGATCGTT CATAACAATCGCAAAGCGAA
Downstream 100 bases:
>100_bases AACACGATGGACTATTTAAAGATTTAATGAATGACTCAAAAGCAGCTCTGGATTTTACAAATGATTTTTTACCAAATGAA GTTAAAAACATACTAGATTT
Product: putative conjugative transfer protein TraI
Products: NA
Alternate protein names: Conjugative Transfer Protein TraI; Conjugal Transfer Protein TraA; MobA/MobL Family Protein
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MRMTLITIIAEGAETALSLQQAGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNSITNNTVIKAAKTLEMKGAITC IVKPPENGDFNNLLQSCGYQSIRDIIEPEITKLTKAVETTKLTQTENNSIEKQNNITNVKELYNKSSSLYYFKQEEEAKV ETIVVNKYLENHTEIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADVAEKSVGTI SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKE AVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCLKI
Sequences:
>Translated_372_residues MRMTLITIIAEGAETALSLQQAGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNSITNNTVIKAAKTLEMKGAITC IVKPPENGDFNNLLQSCGYQSIRDIIEPEITKLTKAVETTKLTQTENNSIEKQNNITNVKELYNKSSSLYYFKQEEEAKV ETIVVNKYLENHTEIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADVAEKSVGTI SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKE AVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCLKI >Mature_372_residues MRMTLITIIAEGAETALSLQQAGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNSITNNTVIKAAKTLEMKGAITC IVKPPENGDFNNLLQSCGYQSIRDIIEPEITKLTKAVETTKLTQTENNSIEKQNNITNVKELYNKSSSLYYFKQEEEAKV ETIVVNKYLENHTEIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADVAEKSVGTI SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKE AVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCLKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41040; Mature: 41040
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMTLITIIAEGAETALSLQQAGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNSI CCEEEEEEEECCHHHHHHHHHCCCCCCEEEECCHHHHCCCCCCCCCEEEEEECCCCCCCC TNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQSCGYQSIRDIIEPEITKLTKAVETT CCCHHHHHHHHEEECCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHH KLTQTENNSIEKQNNITNVKELYNKSSSLYYFKQEEEAKVETIVVNKYLENHTEIYSAKI HEECCCCCCCHHHCCCHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHCCHHEEEEEE FNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADVAEKSVGTI ECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCC SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKII CCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEE LAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESI EEEECCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHH QTNIQPGLCLKI HHCCCCCEEEEC >Mature Secondary Structure MRMTLITIIAEGAETALSLQQAGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNSI CCEEEEEEEECCHHHHHHHHHCCCCCCEEEECCHHHHCCCCCCCCCEEEEEECCCCCCCC TNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQSCGYQSIRDIIEPEITKLTKAVETT CCCHHHHHHHHEEECCEEEEEEECCCCCCHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHH KLTQTENNSIEKQNNITNVKELYNKSSSLYYFKQEEEAKVETIVVNKYLENHTEIYSAKI HEECCCCCCCHHHCCCHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHCCHHEEEEEE FNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADVAEKSVGTI ECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCC SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKII CCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEE LAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESI EEEECCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHH QTNIQPGLCLKI HHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA