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The map label for this gene is 189026224

Identifier: 189026224

GI number: 189026224

Start: 1090880

End: 1092061

Strand: Reverse

Name: 189026224

Synonym: TPASS_1001

Alternate gene names: NA

Gene position: 1092061-1090880 (Counterclockwise)

Preceding gene: 189026225

Following gene: 189026221

Centisome position: 95.84

GC content: 51.95

Gene sequence:

>1182_bases
TTGCAATCGTACGAGGGTGGGGTATGGCTTACGTGTGATATAATGGGCGTTAGCCTATTTTTGGTGAGGGAGCATGTCGT
CATGTGGGATCTGCATCGTGCTTTATGCGCAGGGTTGTTGAGTGTGCTGCTCTACGGCGGCTGTTCTTCTGCGCGGGACT
TTGTACACGTTATGAAAACTGCGGGCAATGAAGTGGCGCTTGTGCATTACGCGTTGCAAGGTGATTGCATTGTGTTTGGT
TTTCGCGGTGAGGTATCTGATGTAGTTGCGCGCGTATATCGCGCAGAGGGTGTTGTTTCAGAGGAAATGAGCGATGAGCT
GTTGCAGTCCTTTACAGACGAAATCCCCTCTGCACTTTCACGCATTGCGGTGCCTGCAGCGTATCAGGAGTCTGTGGATG
CAGCCCGTGAGCGCCTTTCGTTTTTCGCAGTGCGCTTTTTACAAAAGCCGCACGTGGGGCAGCAGGTGGTATTGCGTGGT
AGTGCGCAGGACGTGGCGCACCAGAAGCATGATTTTGTGCTTCCTTTTGAGGGGATAAATACACAGCCTGCGCGTTTAGA
AATCAGCGAAGTCCGTCCCCTTTATGGGAATAAACGCTCGGAATTTGTGGAATTGCTTGTCGTGGAATCCGGTAATTTGC
TGGGAATTACTATCACAAATGTAGGTGGCAAGGGGAATCGCTGCGACTATCATTTTCCTGCAGCCCAGGTGCGGGTAGGA
GAGCGTGTGGTATTACATTGGCGTAAGCAGGATCCTGCTTCGTGTGATGAACTGTCTGCTGAAACGGTATCGGCAGGTTC
GCAGGCCTGTGCGCGTGCACGCGATTTTTGGGGGCAGGAACGCTCAATCCCAGGGCGTAACCCAAACGCAATCGTAGTGA
AAGAATCTGCCAACGGAAAGATACAGGATGCGCTGCTATTCTTTAATACCCACGTAAAAAAGGGAAAGGCGCCGACGTTT
CGCTGGGCTTTTCCAGAAATTGAAGCTGCCTCGCGGCTTGCATTGGAGCAAGGGGCGTGGCTGAGCACGCACGAGCACTT
CCCTCTAAGAGAGAGTCACTTTTTTCAGTGCGATTTGACGCCAGCGAAGAGTATCGCGTTAAAGCGCAAACGGGGCGCAG
GCCGATCTGCGGCAGATTGTTTTGTGCTAAAAAAAGCAACGATGGGGTTGCCAAATCAATAG

Upstream 100 bases:

>100_bases
GACGCTTTGATTTTTGTTGTTGAAAAGCACGGATATGCCCCTGATGGAGCATCAGTTCGGTACATGGTAGAGGCGTGTCG
TCTGTAACGGTTATGGGTTC

Downstream 100 bases:

>100_bases
CTCTTCAGGGTGCTGCTAACTTCAGCAAATTGATCGTGTCGGCACCCTGCTTAGGTCTTGGCGCTTGCTCTGAAACCAAA
AGCTTGTCGGGTTCTACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MQSYEGGVWLTCDIMGVSLFLVREHVVMWDLHRALCAGLLSVLLYGGCSSARDFVHVMKTAGNEVALVHYALQGDCIVFG
FRGEVSDVVARVYRAEGVVSEEMSDELLQSFTDEIPSALSRIAVPAAYQESVDAARERLSFFAVRFLQKPHVGQQVVLRG
SAQDVAHQKHDFVLPFEGINTQPARLEISEVRPLYGNKRSEFVELLVVESGNLLGITITNVGGKGNRCDYHFPAAQVRVG
ERVVLHWRKQDPASCDELSAETVSAGSQACARARDFWGQERSIPGRNPNAIVVKESANGKIQDALLFFNTHVKKGKAPTF
RWAFPEIEAASRLALEQGAWLSTHEHFPLRESHFFQCDLTPAKSIALKRKRGAGRSAADCFVLKKATMGLPNQ

Sequences:

>Translated_393_residues
MQSYEGGVWLTCDIMGVSLFLVREHVVMWDLHRALCAGLLSVLLYGGCSSARDFVHVMKTAGNEVALVHYALQGDCIVFG
FRGEVSDVVARVYRAEGVVSEEMSDELLQSFTDEIPSALSRIAVPAAYQESVDAARERLSFFAVRFLQKPHVGQQVVLRG
SAQDVAHQKHDFVLPFEGINTQPARLEISEVRPLYGNKRSEFVELLVVESGNLLGITITNVGGKGNRCDYHFPAAQVRVG
ERVVLHWRKQDPASCDELSAETVSAGSQACARARDFWGQERSIPGRNPNAIVVKESANGKIQDALLFFNTHVKKGKAPTF
RWAFPEIEAASRLALEQGAWLSTHEHFPLRESHFFQCDLTPAKSIALKRKRGAGRSAADCFVLKKATMGLPNQ
>Mature_393_residues
MQSYEGGVWLTCDIMGVSLFLVREHVVMWDLHRALCAGLLSVLLYGGCSSARDFVHVMKTAGNEVALVHYALQGDCIVFG
FRGEVSDVVARVYRAEGVVSEEMSDELLQSFTDEIPSALSRIAVPAAYQESVDAARERLSFFAVRFLQKPHVGQQVVLRG
SAQDVAHQKHDFVLPFEGINTQPARLEISEVRPLYGNKRSEFVELLVVESGNLLGITITNVGGKGNRCDYHFPAAQVRVG
ERVVLHWRKQDPASCDELSAETVSAGSQACARARDFWGQERSIPGRNPNAIVVKESANGKIQDALLFFNTHVKKGKAPTF
RWAFPEIEAASRLALEQGAWLSTHEHFPLRESHFFQCDLTPAKSIALKRKRGAGRSAADCFVLKKATMGLPNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1001_TREPA (O83966)

Other databases:

- EMBL:   AE000520
- PIR:   C71254
- RefSeq:   NP_219438.1
- ProteinModelPortal:   O83966
- GeneID:   2610771
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP1001
- NMPDR:   fig|243276.1.peg.996
- TIGR:   TP_1001
- HOGENOM:   HBG732192
- OMA:   ANTRPAG
- ProtClustDB:   CLSK218963
- BioCyc:   TPAL243276:TP_1001-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43440; Mature: 43440

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSYEGGVWLTCDIMGVSLFLVREHVVMWDLHRALCAGLLSVLLYGGCSSARDFVHVMKT
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AGNEVALVHYALQGDCIVFGFRGEVSDVVARVYRAEGVVSEEMSDELLQSFTDEIPSALS
CCCEEEEEEEEECCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RIAVPAAYQESVDAARERLSFFAVRFLQKPHVGQQVVLRGSAQDVAHQKHDFVLPFEGIN
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCEEEECCCCC
TQPARLEISEVRPLYGNKRSEFVELLVVESGNLLGITITNVGGKGNRCDYHFPAAQVRVG
CCCCEEEHHHCCCCCCCCHHHEEEEEEEECCCEEEEEEEECCCCCCCCCEECCHHHHCCC
ERVVLHWRKQDPASCDELSAETVSAGSQACARARDFWGQERSIPGRNPNAIVVKESANGK
CEEEEEECCCCCCCHHHHCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC
IQDALLFFNTHVKKGKAPTFRWAFPEIEAASRLALEQGAWLSTHEHFPLRESHFFQCDLT
HHHEEEEEEHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECC
PAKSIALKRKRGAGRSAADCFVLKKATMGLPNQ
HHHHHHHHHHCCCCCCHHHHHEEEHHCCCCCCC
>Mature Secondary Structure
MQSYEGGVWLTCDIMGVSLFLVREHVVMWDLHRALCAGLLSVLLYGGCSSARDFVHVMKT
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AGNEVALVHYALQGDCIVFGFRGEVSDVVARVYRAEGVVSEEMSDELLQSFTDEIPSALS
CCCEEEEEEEEECCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RIAVPAAYQESVDAARERLSFFAVRFLQKPHVGQQVVLRGSAQDVAHQKHDFVLPFEGIN
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCCEEEECCCCC
TQPARLEISEVRPLYGNKRSEFVELLVVESGNLLGITITNVGGKGNRCDYHFPAAQVRVG
CCCCEEEHHHCCCCCCCCHHHEEEEEEEECCCEEEEEEEECCCCCCCCCEECCHHHHCCC
ERVVLHWRKQDPASCDELSAETVSAGSQACARARDFWGQERSIPGRNPNAIVVKESANGK
CEEEEEECCCCCCCHHHHCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC
IQDALLFFNTHVKKGKAPTFRWAFPEIEAASRLALEQGAWLSTHEHFPLRESHFFQCDLT
HHHEEEEEEHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECC
PAKSIALKRKRGAGRSAADCFVLKKATMGLPNQ
HHHHHHHHHHCCCCCCHHHHHEEEHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876