Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is flgG [H]
Identifier: 189026183
GI number: 189026183
Start: 1042947
End: 1043741
Strand: Reverse
Name: flgG [H]
Synonym: TPASS_0960
Alternate gene names: 189026183
Gene position: 1043741-1042947 (Counterclockwise)
Preceding gene: 189026184
Following gene: 189026182
Centisome position: 91.6
GC content: 52.96
Gene sequence:
>795_bases ATGGTACGAAGTTTGTGGACCGCTGCTACGGGGATGAACGGCCAGCAGGCAAACATCGATACGGTAGCGAATAATCTAGC GAATGTGAATACGTCTGGTTTTAAAAGACAGCGTGCGGAGTTCGAGGACCTGTTGTATCAGACCATACGCACCGCGGGTA CGCCTGCAACTGAGGACACACTTACCCCTGTTGGGGTACGGATGGGGCACGGGGTGAAACTCGCTGCAACGCAGCGCCTC TTCGAACAAGGTTCGCTCCAGCACACGGGTGTGAGCGGAGATGTGGCTATTGCGGGTGAGGGGTTTTTTCGCGTACTGCA ATATGACGGAACCTATGCTTATACCCGCGACGGTTCGTTCAAGGTGGATGCGGAGCGGCAATTGGTGACCTCAAACGGGT TGCGTCTCGTTCCAGAGATTATTTTTCCCGAAAACTACGTAGAACACAGTATCGCTATTAGCAAGGATGGGCGCGTTACG GTGCGAGTCGGGGAACAGGGAGATCCGGTTGAGGTAGGACAGCTTGAGCTGTATCGCTTCGCGAACAATGCGGGGCTTGC AGCAGAGGGGGGGAATGTGTTTACCCAAACACCTGCGTCCGGCCAGCCAATTCCCGGAAGGCCGGGTTTTGAAGGATTCG GAAAGGTTGAGCATAAGTTTTTGGAAATGTCAAACGTGTCTACAGTAAGTGAAATGGTGAACATGATTGTCGCCCAGCGT GCGTATGAGTTTAATTCAAAAGCAATTCAAACGAGTGACAACATGCTCGGCACAGCAGTGGCGCTCAAGCGTTAG
Upstream 100 bases:
>100_bases GAACGAAGTGGTGCGTGCAAAGTAGTTGTCCGCATGTTTTATAGAATGTAAAGAAGATATAGACGAGCATAGCGTGTAGC GGAGTGAGAGGGAGGTGTGA
Downstream 100 bases:
>100_bases GAGACTGAAAGGTGAACGTGCACCGTGTATTGTCATTGGGGATGCAGTCTGTTCCTTCCGTTACCCTGTCTAAGACAGGG AAAATGGAAGGTAGTGGTTC
Product: flagellar basal body rod protein FlgG
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MVRSLWTAATGMNGQQANIDTVANNLANVNTSGFKRQRAEFEDLLYQTIRTAGTPATEDTLTPVGVRMGHGVKLAATQRL FEQGSLQHTGVSGDVAIAGEGFFRVLQYDGTYAYTRDGSFKVDAERQLVTSNGLRLVPEIIFPENYVEHSIAISKDGRVT VRVGEQGDPVEVGQLELYRFANNAGLAAEGGNVFTQTPASGQPIPGRPGFEGFGKVEHKFLEMSNVSTVSEMVNMIVAQR AYEFNSKAIQTSDNMLGTAVALKR
Sequences:
>Translated_264_residues MVRSLWTAATGMNGQQANIDTVANNLANVNTSGFKRQRAEFEDLLYQTIRTAGTPATEDTLTPVGVRMGHGVKLAATQRL FEQGSLQHTGVSGDVAIAGEGFFRVLQYDGTYAYTRDGSFKVDAERQLVTSNGLRLVPEIIFPENYVEHSIAISKDGRVT VRVGEQGDPVEVGQLELYRFANNAGLAAEGGNVFTQTPASGQPIPGRPGFEGFGKVEHKFLEMSNVSTVSEMVNMIVAQR AYEFNSKAIQTSDNMLGTAVALKR >Mature_264_residues MVRSLWTAATGMNGQQANIDTVANNLANVNTSGFKRQRAEFEDLLYQTIRTAGTPATEDTLTPVGVRMGHGVKLAATQRL FEQGSLQHTGVSGDVAIAGEGFFRVLQYDGTYAYTRDGSFKVDAERQLVTSNGLRLVPEIIFPENYVEHSIAISKDGRVT VRVGEQGDPVEVGQLELYRFANNAGLAAEGGNVFTQTPASGQPIPGRPGFEGFGKVEHKFLEMSNVSTVSEMVNMIVAQR AYEFNSKAIQTSDNMLGTAVALKR
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=256, Percent_Identity=52.734375, Blast_Score=266, Evalue=1e-72, Organism=Escherichia coli, GI1787316, Length=129, Percent_Identity=36.4341085271318, Blast_Score=85, Evalue=6e-18,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 28597; Mature: 28597
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRSLWTAATGMNGQQANIDTVANNLANVNTSGFKRQRAEFEDLLYQTIRTAGTPATEDT CCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC LTPVGVRMGHGVKLAATQRLFEQGSLQHTGVSGDVAIAGEGFFRVLQYDGTYAYTRDGSF CCCCCEECCCCEEHHHHHHHHHCCCCEECCCCCCEEEECCCEEEEEEECCEEEEECCCCE KVDAERQLVTSNGLRLVPEIIFPENYVEHSIAISKDGRVTVRVGEQGDPVEVGQLELYRF EECCCCEEEECCCCEEEHHHHCCCCHHHHEEEEECCCEEEEEECCCCCCCCCCCEEEEEE ANNAGLAAEGGNVFTQTPASGQPIPGRPGFEGFGKVEHKFLEMSNVSTVSEMVNMIVAQR ECCCCEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH AYEFNSKAIQTSDNMLGTAVALKR HHHCCCCEEECCCCCEEHEEEECC >Mature Secondary Structure MVRSLWTAATGMNGQQANIDTVANNLANVNTSGFKRQRAEFEDLLYQTIRTAGTPATEDT CCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC LTPVGVRMGHGVKLAATQRLFEQGSLQHTGVSGDVAIAGEGFFRVLQYDGTYAYTRDGSF CCCCCEECCCCEEHHHHHHHHHCCCCEECCCCCCEEEECCCEEEEEEECCEEEEECCCCE KVDAERQLVTSNGLRLVPEIIFPENYVEHSIAISKDGRVTVRVGEQGDPVEVGQLELYRF EECCCCEEEECCCCEEEHHHHCCCCHHHHEEEEECCCEEEEEECCCCCCCCCCCEEEEEE ANNAGLAAEGGNVFTQTPASGQPIPGRPGFEGFGKVEHKFLEMSNVSTVSEMVNMIVAQR ECCCCEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH AYEFNSKAIQTSDNMLGTAVALKR HHHCCCCEEECCCCCEEHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]