Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189026118
Identifier: 189026118
GI number: 189026118
Start: 975099
End: 975605
Strand: Reverse
Name: 189026118
Synonym: TPASS_0895
Alternate gene names: NA
Gene position: 975605-975099 (Counterclockwise)
Preceding gene: 189026119
Following gene: 189026117
Centisome position: 85.62
GC content: 53.85
Gene sequence:
>507_bases GTGTGTAGACGTTTGTGCCATCACAGGTGGCGCGTGTGGGGAAAGGTTGCTTCCCTGGGAGTGCTCCTTTTAGGAGGGCT TGTTGCCTGCACTTCAAGCGCAGCCGGGTCAACCTCCAACACGCGGCCGGGGGTGCGTATGACGATCACCAGCCGCTACC CCTTCGATCGCACTATGCAGCTTTTGGAGAGCGCTTTGCGCACGCAGGGCTTTAGCGTTTTTGGTATTGTTGACTACCGC GAGGCAGCCCACAAACAGAACTTGGATATACAACCTGCAAAGCTTATGGTGGTGGGCTTCCCTAAAATTGGCACGCCCCT CATGCTCGAGGATCCTTACTTTCTTCTTCGTGTCCCTCTGTACCTTATGGTTACCGATGTGCGCGGGAAGACGCGCGTGT CGTTCCACAATACGCGTGGACTGATGGATAGCTATGTAGAGCTTTCTGATATGGATCAGGCCATCGAGTTAGTAGAATCC ATCGTCAAGAAAACCCTTGCAGAGTAG
Upstream 100 bases:
>100_bases TGCAAAAATTCCACGTATCGGGTCATATGTGACCCGATACGTGGAATTTTTGCGCCGGCGCATATCTGGCCGGGCATGAC ACGCAGCGGAGGTAGGCGGG
Downstream 100 bases:
>100_bases GACGTTTTGGAAAAGAAATTTGCGTTGCTCATCGATGGAGACAATATCTCCCCTAAATTCCTTGAGGGAATCGTCGGTGA AGTGTCTAAAGAAGGTGATA
Product: hypothetical protein
Products: NA
Alternate protein names: Exported Protein
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MCRRLCHHRWRVWGKVASLGVLLLGGLVACTSSAAGSTSNTRPGVRMTITSRYPFDRTMQLLESALRTQGFSVFGIVDYR EAAHKQNLDIQPAKLMVVGFPKIGTPLMLEDPYFLLRVPLYLMVTDVRGKTRVSFHNTRGLMDSYVELSDMDQAIELVES IVKKTLAE
Sequences:
>Translated_168_residues MCRRLCHHRWRVWGKVASLGVLLLGGLVACTSSAAGSTSNTRPGVRMTITSRYPFDRTMQLLESALRTQGFSVFGIVDYR EAAHKQNLDIQPAKLMVVGFPKIGTPLMLEDPYFLLRVPLYLMVTDVRGKTRVSFHNTRGLMDSYVELSDMDQAIELVES IVKKTLAE >Mature_168_residues MCRRLCHHRWRVWGKVASLGVLLLGGLVACTSSAAGSTSNTRPGVRMTITSRYPFDRTMQLLESALRTQGFSVFGIVDYR EAAHKQNLDIQPAKLMVVGFPKIGTPLMLEDPYFLLRVPLYLMVTDVRGKTRVSFHNTRGLMDSYVELSDMDQAIELVES IVKKTLAE
Specific function: Unknown
COG id: COG3439
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18863; Mature: 18863
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRRLCHHRWRVWGKVASLGVLLLGGLVACTSSAAGSTSNTRPGVRMTITSRYPFDRTMQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHH LLESALRTQGFSVFGIVDYREAAHKQNLDIQPAKLMVVGFPKIGTPLMLEDPYFLLRVPL HHHHHHHHCCCEEEEEEHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCHHHHHHHH YLMVTDVRGKTRVSFHNTRGLMDSYVELSDMDQAIELVESIVKKTLAE HHEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MCRRLCHHRWRVWGKVASLGVLLLGGLVACTSSAAGSTSNTRPGVRMTITSRYPFDRTMQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHH LLESALRTQGFSVFGIVDYREAAHKQNLDIQPAKLMVVGFPKIGTPLMLEDPYFLLRVPL HHHHHHHHCCCEEEEEEHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCHHHHHHHH YLMVTDVRGKTRVSFHNTRGLMDSYVELSDMDQAIELVESIVKKTLAE HHEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA