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The map label for this gene is ykpA [H]

Identifier: 189026062

GI number: 189026062

Start: 909461

End: 911125

Strand: Reverse

Name: ykpA [H]

Synonym: TPASS_0838

Alternate gene names: 189026062

Gene position: 911125-909461 (Counterclockwise)

Preceding gene: 189026063

Following gene: 189026060

Centisome position: 79.96

GC content: 46.55

Gene sequence:

>1665_bases
ATGCGCCGCATGATAACAGTGACGGGTATGAGTGTGCAGTTTTCTGACAAACCTCTTTTTAAAGGTGTTGATTTAAAGTT
TGTTGCAGGGAATTGCTATGGAGTCATTGGAGCGAACGGGGCAGGTAAGTCAACTTTTTTAAAAGTCCTTTCCGGTGAAC
TCGAACATCATCAGGGAAGTATCGCTATCGCATCCGGCGCGCGCGTCGCAGTTCTGCGTCAAGATCATTTTTCCTTCGAT
CAGCACACGGTGAAAGATACCGTATGCATGGGGCATCCTGCGCTCTATCGAGTGATGAAGGAGCGGGAAGCTCTTTACGC
AAAGAGTGATTTTAGTGAAGCAGATGGGTTGAAGGCTTCAGAATTGGAAGGTGAGTTTTCGGATTTGAATGGCTGGGAGG
CAGAAAATTGCATTGAACAAATGCTTTCTGGGTTGGGTGTAGATGAGGCACACCATGATCGGATGATGTGCGAATTGGAC
GAAAGCCAGAAGGTACGTGTACTCCTAGCGCAGGCGTTGTTTGGTAATCCCGATGTGCTTTTGCTCGATGAGCCGACAAA
CGGTTTGGATTTGTACTCTATTGCGTGGTTGGAAGAATTTCTCATTGAATTCCCCAACACTGTGATTGTAGTTTCGCATG
ATAGGCATTTTTTAAATAGCGTGTGTACGCATATTTGCGATATCGATTATGGGAAGATTCGTTTGTACTCGGGCAATTAC
GATTTTTGGTATCAGATGAGTCAGATTATGCAGCGGCAGGTTAAGGATCAGCAGAAGAAGCGTGAAGAAAAGATGAAGGA
CCTGAGGGAGTTTATTTTGCGCTTCGCTTCTAACGCAGCCAAAAGCCGGCAGGCGACGAGTCGTAAAAAGATATATGACA
AATTGGTGCTGGAAGAGATTGAGGTGACTGGTCGAAAGTTTCCCTATGTGCATTTTAAACCACGGCGTGAAATTGGGAAT
CACGTATTGTCGTGCGATGGACTGCGCTATGCCGCTGAGGACCGAATGCAGGGAGGTTCATGTGAGCTTTTTACAGACAT
GAGCTTTACAGTTGGGCGCACAGACAAAATCGCTTTCGTCGGTCAAGAACACCGCGCGAAGACCATATTGTTTGATATTC
TTGCTGGAGAAAAGCAGGCACATGCCGGCTCTTTCCGTTGGGGACAGACGGTATCTGTTGGGTATATGGGAAAGGATACG
GCGCGGTATTTTGATTGTGATCTTTCTATCACGGATTGGTTGCGCCAATTCTCTGATGATCAAGATGAAACCTACGTACG
CGGTTTTTTAGGCAGGATGCTTTTTACAGGCGAGGATTCGCTCAAATCTGTGCGTGTACTTTCTGGAGGGGAAAAAGTAC
GCTGCATGCTTAGTAAATTAATGCTTTCTGGGAGCAATGTTTTGATATTGGACGAGCCGACCAATCATTTGGACCTAGAA
GCAATTGCAAGTCTGAATGAGGCGTTGGTGCAGTTTCCCGGCGTGATTTTATTTAATTCGCATGACCATGAGTTTGTCAG
CTCTGTTGCAAACCGCATTGTGGAAATTACGCCGCGCGGGATTATCGATCGTATGATGGACTTTGATTCTTATGTAAAGA
GTGAGGATATCAACGCCACGCGCGCGCAGCTCTACGGCGGTAGCGTACAGCAGCTACGGATATAG

Upstream 100 bases:

>100_bases
TATTGCACGTATATTTTCCACAGTGACGCGCTCATAGCATCGCTGTATGTGTGATGCTCTATGGACAGCGGCTTGTCCTG
TGCACGGATTTTGCGCTAGC

Downstream 100 bases:

>100_bases
CGTCCCTTCCCCTGAAGGTTTGGGGAAAAGGCACAGGGGACTCATGGGCTAGGCGTGCAGCGCGCGCGTCTCTAGCTTCG
CGAGCAAAAAGGTGGAAAAG

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MRRMITVTGMSVQFSDKPLFKGVDLKFVAGNCYGVIGANGAGKSTFLKVLSGELEHHQGSIAIASGARVAVLRQDHFSFD
QHTVKDTVCMGHPALYRVMKEREALYAKSDFSEADGLKASELEGEFSDLNGWEAENCIEQMLSGLGVDEAHHDRMMCELD
ESQKVRVLLAQALFGNPDVLLLDEPTNGLDLYSIAWLEEFLIEFPNTVIVVSHDRHFLNSVCTHICDIDYGKIRLYSGNY
DFWYQMSQIMQRQVKDQQKKREEKMKDLREFILRFASNAAKSRQATSRKKIYDKLVLEEIEVTGRKFPYVHFKPRREIGN
HVLSCDGLRYAAEDRMQGGSCELFTDMSFTVGRTDKIAFVGQEHRAKTILFDILAGEKQAHAGSFRWGQTVSVGYMGKDT
ARYFDCDLSITDWLRQFSDDQDETYVRGFLGRMLFTGEDSLKSVRVLSGGEKVRCMLSKLMLSGSNVLILDEPTNHLDLE
AIASLNEALVQFPGVILFNSHDHEFVSSVANRIVEITPRGIIDRMMDFDSYVKSEDINATRAQLYGGSVQQLRI

Sequences:

>Translated_554_residues
MRRMITVTGMSVQFSDKPLFKGVDLKFVAGNCYGVIGANGAGKSTFLKVLSGELEHHQGSIAIASGARVAVLRQDHFSFD
QHTVKDTVCMGHPALYRVMKEREALYAKSDFSEADGLKASELEGEFSDLNGWEAENCIEQMLSGLGVDEAHHDRMMCELD
ESQKVRVLLAQALFGNPDVLLLDEPTNGLDLYSIAWLEEFLIEFPNTVIVVSHDRHFLNSVCTHICDIDYGKIRLYSGNY
DFWYQMSQIMQRQVKDQQKKREEKMKDLREFILRFASNAAKSRQATSRKKIYDKLVLEEIEVTGRKFPYVHFKPRREIGN
HVLSCDGLRYAAEDRMQGGSCELFTDMSFTVGRTDKIAFVGQEHRAKTILFDILAGEKQAHAGSFRWGQTVSVGYMGKDT
ARYFDCDLSITDWLRQFSDDQDETYVRGFLGRMLFTGEDSLKSVRVLSGGEKVRCMLSKLMLSGSNVLILDEPTNHLDLE
AIASLNEALVQFPGVILFNSHDHEFVSSVANRIVEITPRGIIDRMMDFDSYVKSEDINATRAQLYGGSVQQLRI
>Mature_554_residues
MRRMITVTGMSVQFSDKPLFKGVDLKFVAGNCYGVIGANGAGKSTFLKVLSGELEHHQGSIAIASGARVAVLRQDHFSFD
QHTVKDTVCMGHPALYRVMKEREALYAKSDFSEADGLKASELEGEFSDLNGWEAENCIEQMLSGLGVDEAHHDRMMCELD
ESQKVRVLLAQALFGNPDVLLLDEPTNGLDLYSIAWLEEFLIEFPNTVIVVSHDRHFLNSVCTHICDIDYGKIRLYSGNY
DFWYQMSQIMQRQVKDQQKKREEKMKDLREFILRFASNAAKSRQATSRKKIYDKLVLEEIEVTGRKFPYVHFKPRREIGN
HVLSCDGLRYAAEDRMQGGSCELFTDMSFTVGRTDKIAFVGQEHRAKTILFDILAGEKQAHAGSFRWGQTVSVGYMGKDT
ARYFDCDLSITDWLRQFSDDQDETYVRGFLGRMLFTGEDSLKSVRVLSGGEKVRCMLSKLMLSGSNVLILDEPTNHLDLE
AIASLNEALVQFPGVILFNSHDHEFVSSVANRIVEITPRGIIDRMMDFDSYVKSEDINATRAQLYGGSVQQLRI

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=553, Percent_Identity=30.0180831826401, Blast_Score=226, Evalue=5e-59,
Organism=Homo sapiens, GI27881506, Length=518, Percent_Identity=29.3436293436293, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI10947137, Length=518, Percent_Identity=29.3436293436293, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI69354671, Length=549, Percent_Identity=27.5045537340619, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI10947135, Length=549, Percent_Identity=27.5045537340619, Blast_Score=184, Evalue=2e-46,
Organism=Escherichia coli, GI1787041, Length=536, Percent_Identity=42.910447761194, Blast_Score=474, Evalue=1e-135,
Organism=Escherichia coli, GI2367384, Length=517, Percent_Identity=30.174081237911, Blast_Score=231, Evalue=8e-62,
Organism=Escherichia coli, GI1789751, Length=532, Percent_Identity=26.8796992481203, Blast_Score=221, Evalue=1e-58,
Organism=Escherichia coli, GI1787182, Length=514, Percent_Identity=32.295719844358, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI1786398, Length=218, Percent_Identity=25.2293577981651, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17553372, Length=542, Percent_Identity=30.4428044280443, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17555318, Length=526, Percent_Identity=27.9467680608365, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17559834, Length=545, Percent_Identity=28.8073394495413, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17565586, Length=219, Percent_Identity=26.027397260274, Blast_Score=73, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=301, Percent_Identity=25.2491694352159, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=525, Percent_Identity=30.8571428571429, Blast_Score=215, Evalue=1e-56,
Organism=Saccharomyces cerevisiae, GI6321121, Length=544, Percent_Identity=30.1470588235294, Blast_Score=205, Evalue=2e-53,
Organism=Saccharomyces cerevisiae, GI6325030, Length=236, Percent_Identity=30.9322033898305, Blast_Score=94, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6323278, Length=417, Percent_Identity=23.5011990407674, Blast_Score=90, Evalue=8e-19,
Organism=Saccharomyces cerevisiae, GI6324314, Length=419, Percent_Identity=22.9116945107399, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6320266, Length=218, Percent_Identity=24.3119266055046, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24666836, Length=522, Percent_Identity=29.5019157088123, Blast_Score=222, Evalue=6e-58,
Organism=Drosophila melanogaster, GI24642252, Length=560, Percent_Identity=27.3214285714286, Blast_Score=205, Evalue=7e-53,
Organism=Drosophila melanogaster, GI18859989, Length=560, Percent_Identity=27.3214285714286, Blast_Score=205, Evalue=7e-53,
Organism=Drosophila melanogaster, GI24641342, Length=542, Percent_Identity=26.7527675276753, Blast_Score=202, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 62677; Mature: 62677

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRMITVTGMSVQFSDKPLFKGVDLKFVAGNCYGVIGANGAGKSTFLKVLSGELEHHQGS
CCEEEEEECEEEEECCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCC
IAIASGARVAVLRQDHFSFDQHTVKDTVCMGHPALYRVMKEREALYAKSDFSEADGLKAS
EEEECCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHCCCCHH
ELEGEFSDLNGWEAENCIEQMLSGLGVDEAHHDRMMCELDESQKVRVLLAQALFGNPDVL
HCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCEEEECCCCCHHHHHHHHHHCCCCCEE
LLDEPTNGLDLYSIAWLEEFLIEFPNTVIVVSHDRHFLNSVCTHICDIDYGKIRLYSGNY
EEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCC
DFWYQMSQIMQRQVKDQQKKREEKMKDLREFILRFASNAAKSRQATSRKKIYDKLVLEEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVTGRKFPYVHFKPRREIGNHVLSCDGLRYAAEDRMQGGSCELFTDMSFTVGRTDKIAFV
HHCCCCCCEEEECCHHHHCCCEEECCCCCHHHHHHCCCCCEEEEECCEEEECCCCEEEEE
GQEHRAKTILFDILAGEKQAHAGSFRWGQTVSVGYMGKDTARYFDCDLSITDWLRQFSDD
CCCCCHHEEEEHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHCCC
QDETYVRGFLGRMLFTGEDSLKSVRVLSGGEKVRCMLSKLMLSGSNVLILDEPTNHLDLE
CCHHHHHHHHHHHEECCCHHHHHEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHH
AIASLNEALVQFPGVILFNSHDHEFVSSVANRIVEITPRGIIDRMMDFDSYVKSEDINAT
HHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCCCCCHH
RAQLYGGSVQQLRI
HHHHCCCCHHCCCC
>Mature Secondary Structure
MRRMITVTGMSVQFSDKPLFKGVDLKFVAGNCYGVIGANGAGKSTFLKVLSGELEHHQGS
CCEEEEEECEEEEECCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCC
IAIASGARVAVLRQDHFSFDQHTVKDTVCMGHPALYRVMKEREALYAKSDFSEADGLKAS
EEEECCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHCCCCHH
ELEGEFSDLNGWEAENCIEQMLSGLGVDEAHHDRMMCELDESQKVRVLLAQALFGNPDVL
HCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCCEEEECCCCCHHHHHHHHHHCCCCCEE
LLDEPTNGLDLYSIAWLEEFLIEFPNTVIVVSHDRHFLNSVCTHICDIDYGKIRLYSGNY
EEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCC
DFWYQMSQIMQRQVKDQQKKREEKMKDLREFILRFASNAAKSRQATSRKKIYDKLVLEEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVTGRKFPYVHFKPRREIGNHVLSCDGLRYAAEDRMQGGSCELFTDMSFTVGRTDKIAFV
HHCCCCCCEEEECCHHHHCCCEEECCCCCHHHHHHCCCCCEEEEECCEEEECCCCEEEEE
GQEHRAKTILFDILAGEKQAHAGSFRWGQTVSVGYMGKDTARYFDCDLSITDWLRQFSDD
CCCCCHHEEEEHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHCCC
QDETYVRGFLGRMLFTGEDSLKSVRVLSGGEKVRCMLSKLMLSGSNVLILDEPTNHLDLE
CCHHHHHHHHHHHEECCCHHHHHEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHH
AIASLNEALVQFPGVILFNSHDHEFVSSVANRIVEITPRGIIDRMMDFDSYVKSEDINAT
HHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCCCCCHH
RAQLYGGSVQQLRI
HHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]