Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is metK
Identifier: 189026019
GI number: 189026019
Start: 862135
End: 863325
Strand: Reverse
Name: metK
Synonym: TPASS_0794
Alternate gene names: 189026019
Gene position: 863325-862135 (Counterclockwise)
Preceding gene: 189026021
Following gene: 189026016
Centisome position: 75.77
GC content: 53.23
Gene sequence:
>1191_bases ATGGAGACGTTTTTTACCTCAGAGTCTGTGAGTGAGGGTCATCCTGATAAGCTGTGCGACCAGATTTCTGACGCTGTTCT TGATGCCTGTCTTTCGCAAGATCCTCACAGTTGTGTTGCGTGCGAAACTTTTGCCTCCACGTCCCTTATCCTGATTGGAG GTGAAATTAGCACGCGGGCGCATATTAATCTTACCCAAATTGCGCGTGATGTTGCCGCTGACATTGGATATGTAAGCGCT GATGTCGGTCTTGATGCAGCGTCCATGGCTGTTCTTGATATGACTCATCATCAGTCGCCTGATATTGCGCAGGGGGTGCA CGGTGCAGGACTGAAGGAGTTTGCAGGATCGCAGGGGGCAGGGGATCAGGGGATTATGTTTGGTTTTGCGTGCCGCGAGA CGCCGGAGTTTATGCCCGCCCCCCTCATGTGCGCGCACGCGGTTGTGCGCTATGCTGCCACGCTTCGTCATGAACGCCGT GTGCCGTGGCTGCGTCCTGATGCAAAAAGTCAGGTTACCGTACAATACGAGGGACATCGACCGGTACGTATCAGTGCGGT TGTGTTTTCTCAGCAGCATGATCCGTCACCTTCATACGAAACCATTAGAGAAACGCTCATAGAGGAGATAGTGCGTCCGG CGCTTGCACCTACAGGTCTGTTAGATGAAAACACGCGTTTTTTTATCAATCCAACCGGTCGTTTTGTCATTGGCGGTCCC TTTGGGGACACTGGTTTGACCGGGAGAAAGATCATCGTAGACACGTATGGGGGAATGGGCCGCCATGGAGGAGGCTCCTT TTCAGGTAAGGATGCATCTAAGGTAGATCGTTCTGCAGCGTATATGGCGCGTTATATTGCAAAAAATATTGTGGCAGCCG ACCTTGCTGAGCGCTGTGAGGTGCAGCTTGCATACGCAATCGGCGTACCATATCCGGTTTCGCTGCGGATAGAAACATTT GGAACGGCGCGCGCATCTGAGTCACACATCACACACGCGGTGAAAGAGATTTTTGATTTAACCCCAGCGGGTATCGTGCG CACGTTGGACCTGTGTGCGCCTCGGTACCGCTCGACTGCAGTGTATGGTCACTTTGGGCGCGAACAGTTTCCTTGGGAAC GCACAGACTGCGTGTGCGACTTACAGCGTGCGGTGCGCCCGTTCGCGCTCTCTGGCCAGATAAAAGAGTAG
Upstream 100 bases:
>100_bases GTGTAGGCAAAGATGAGCGCAGCGCTGACAAGAGGTGTTGAGTGCACCCTTTACTCCTAGGTTCAGTGAGCTGCGTAATT TTGAATCGAGGAGTACAGTG
Downstream 100 bases:
>100_bases CTTCGTTTCTTTTTTGTCTGCGCGGGGCCTGTATCGTTACAGCCCTTCACTTTCTGCCCATGTTACGATGATTGGCTCTA GGGAATGTATGGAAAACCCA
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues METFFTSESVSEGHPDKLCDQISDAVLDACLSQDPHSCVACETFASTSLILIGGEISTRAHINLTQIARDVAADIGYVSA DVGLDAASMAVLDMTHHQSPDIAQGVHGAGLKEFAGSQGAGDQGIMFGFACRETPEFMPAPLMCAHAVVRYAATLRHERR VPWLRPDAKSQVTVQYEGHRPVRISAVVFSQQHDPSPSYETIRETLIEEIVRPALAPTGLLDENTRFFINPTGRFVIGGP FGDTGLTGRKIIVDTYGGMGRHGGGSFSGKDASKVDRSAAYMARYIAKNIVAADLAERCEVQLAYAIGVPYPVSLRIETF GTARASESHITHAVKEIFDLTPAGIVRTLDLCAPRYRSTAVYGHFGREQFPWERTDCVCDLQRAVRPFALSGQIKE
Sequences:
>Translated_396_residues METFFTSESVSEGHPDKLCDQISDAVLDACLSQDPHSCVACETFASTSLILIGGEISTRAHINLTQIARDVAADIGYVSA DVGLDAASMAVLDMTHHQSPDIAQGVHGAGLKEFAGSQGAGDQGIMFGFACRETPEFMPAPLMCAHAVVRYAATLRHERR VPWLRPDAKSQVTVQYEGHRPVRISAVVFSQQHDPSPSYETIRETLIEEIVRPALAPTGLLDENTRFFINPTGRFVIGGP FGDTGLTGRKIIVDTYGGMGRHGGGSFSGKDASKVDRSAAYMARYIAKNIVAADLAERCEVQLAYAIGVPYPVSLRIETF GTARASESHITHAVKEIFDLTPAGIVRTLDLCAPRYRSTAVYGHFGREQFPWERTDCVCDLQRAVRPFALSGQIKE >Mature_396_residues METFFTSESVSEGHPDKLCDQISDAVLDACLSQDPHSCVACETFASTSLILIGGEISTRAHINLTQIARDVAADIGYVSA DVGLDAASMAVLDMTHHQSPDIAQGVHGAGLKEFAGSQGAGDQGIMFGFACRETPEFMPAPLMCAHAVVRYAATLRHERR VPWLRPDAKSQVTVQYEGHRPVRISAVVFSQQHDPSPSYETIRETLIEEIVRPALAPTGLLDENTRFFINPTGRFVIGGP FGDTGLTGRKIIVDTYGGMGRHGGGSFSGKDASKVDRSAAYMARYIAKNIVAADLAERCEVQLAYAIGVPYPVSLRIETF GTARASESHITHAVKEIFDLTPAGIVRTLDLCAPRYRSTAVYGHFGREQFPWERTDCVCDLQRAVRPFALSGQIKE
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family
Homologues:
Organism=Homo sapiens, GI5174529, Length=374, Percent_Identity=53.475935828877, Blast_Score=377, Evalue=1e-105, Organism=Homo sapiens, GI4557737, Length=374, Percent_Identity=52.9411764705882, Blast_Score=367, Evalue=1e-102, Organism=Escherichia coli, GI1789311, Length=373, Percent_Identity=59.7855227882037, Blast_Score=457, Evalue=1e-130, Organism=Caenorhabditis elegans, GI17551082, Length=375, Percent_Identity=50.1333333333333, Blast_Score=369, Evalue=1e-102, Organism=Caenorhabditis elegans, GI17538498, Length=375, Percent_Identity=50.9333333333333, Blast_Score=367, Evalue=1e-102, Organism=Caenorhabditis elegans, GI17538494, Length=375, Percent_Identity=50.9333333333333, Blast_Score=365, Evalue=1e-101, Organism=Caenorhabditis elegans, GI25145633, Length=375, Percent_Identity=50.1333333333333, Blast_Score=360, Evalue=1e-100, Organism=Caenorhabditis elegans, GI32565905, Length=375, Percent_Identity=47.2, Blast_Score=316, Evalue=1e-86, Organism=Caenorhabditis elegans, GI32565911, Length=330, Percent_Identity=47.8787878787879, Blast_Score=295, Evalue=4e-80, Organism=Caenorhabditis elegans, GI25145635, Length=330, Percent_Identity=46.3636363636364, Blast_Score=287, Evalue=7e-78, Organism=Caenorhabditis elegans, GI32565903, Length=303, Percent_Identity=48.5148514851485, Blast_Score=271, Evalue=5e-73, Organism=Caenorhabditis elegans, GI32565909, Length=108, Percent_Identity=47.2222222222222, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI32565907, Length=45, Percent_Identity=75.5555555555556, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320710, Length=375, Percent_Identity=53.0666666666667, Blast_Score=383, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6323209, Length=375, Percent_Identity=52.5333333333333, Blast_Score=380, Evalue=1e-106, Organism=Drosophila melanogaster, GI24580527, Length=374, Percent_Identity=49.1978609625668, Blast_Score=339, Evalue=2e-93, Organism=Drosophila melanogaster, GI24580525, Length=374, Percent_Identity=49.1978609625668, Blast_Score=339, Evalue=2e-93, Organism=Drosophila melanogaster, GI45552159, Length=374, Percent_Identity=49.7326203208556, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI24580529, Length=374, Percent_Identity=49.7326203208556, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI24580537, Length=374, Percent_Identity=49.7326203208556, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI24580533, Length=374, Percent_Identity=49.7326203208556, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI24580535, Length=374, Percent_Identity=49.7326203208556, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI24580531, Length=374, Percent_Identity=49.7326203208556, Blast_Score=337, Evalue=1e-92, Organism=Drosophila melanogaster, GI24580541, Length=362, Percent_Identity=48.3425414364641, Blast_Score=318, Evalue=4e-87, Organism=Drosophila melanogaster, GI24580539, Length=120, Percent_Identity=49.1666666666667, Blast_Score=118, Evalue=6e-27,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): METK_TREPA (O83772)
Other databases:
- EMBL: AE000520 - PIR: A71281 - RefSeq: NP_219231.1 - ProteinModelPortal: O83772 - SMR: O83772 - IntAct: O83772 - GeneID: 2610789 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0794 - NMPDR: fig|243276.1.peg.790 - TIGR: TP_0794 - HOGENOM: HBG443662 - OMA: QDEHARV - ProtClustDB: PRK05250 - BioCyc: TPAL243276:TP_0794-MONOMER - BRENDA: 2.5.1.6 - GO: GO:0005737 - HAMAP: MF_00086 - InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 - PANTHER: PTHR11964 - PIRSF: PIRSF000497 - TIGRFAMs: TIGR01034
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N; SSF55973 S-AdoMet_synt
EC number: =2.5.1.6
Molecular weight: Translated: 42991; Mature: 42991
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00376 ADOMET_SYNTHASE_1; PS00377 ADOMET_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METFFTSESVSEGHPDKLCDQISDAVLDACLSQDPHSCVACETFASTSLILIGGEISTRA CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCEEEEECCCCCCEE HINLTQIARDVAADIGYVSADVGLDAASMAVLDMTHHQSPDIAQGVHGAGLKEFAGSQGA ECCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCHHHHCCCCCC GDQGIMFGFACRETPEFMPAPLMCAHAVVRYAATLRHERRVPWLRPDAKSQVTVQYEGHR CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC PVRISAVVFSQQHDPSPSYETIRETLIEEIVRPALAPTGLLDENTRFFINPTGRFVIGGP CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEECC FGDTGLTGRKIIVDTYGGMGRHGGGSFSGKDASKVDRSAAYMARYIAKNIVAADLAERCE CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VQLAYAIGVPYPVSLRIETFGTARASESHITHAVKEIFDLTPAGIVRTLDLCAPRYRSTA EEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEE VYGHFGREQFPWERTDCVCDLQRAVRPFALSGQIKE EEECCCCCCCCCCHHHHHHHHHHHHCCEECCCCCCC >Mature Secondary Structure METFFTSESVSEGHPDKLCDQISDAVLDACLSQDPHSCVACETFASTSLILIGGEISTRA CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCEEEEECCCCCCEE HINLTQIARDVAADIGYVSADVGLDAASMAVLDMTHHQSPDIAQGVHGAGLKEFAGSQGA ECCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCHHHHCCCCCC GDQGIMFGFACRETPEFMPAPLMCAHAVVRYAATLRHERRVPWLRPDAKSQVTVQYEGHR CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCC PVRISAVVFSQQHDPSPSYETIRETLIEEIVRPALAPTGLLDENTRFFINPTGRFVIGGP CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEECC FGDTGLTGRKIIVDTYGGMGRHGGGSFSGKDASKVDRSAAYMARYIAKNIVAADLAERCE CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VQLAYAIGVPYPVSLRIETFGTARASESHITHAVKEIFDLTPAGIVRTLDLCAPRYRSTA EEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEE VYGHFGREQFPWERTDCVCDLQRAVRPFALSGQIKE EEECCCCCCCCCCHHHHHHHHHHHHCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876