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The map label for this gene is yebA [C]

Identifier: 189025388

GI number: 189025388

Start: 178312

End: 179427

Strand: Direct

Name: yebA [C]

Synonym: TPASS_0155

Alternate gene names: 189025388

Gene position: 178312-179427 (Clockwise)

Preceding gene: 189025387

Following gene: 189025396

Centisome position: 15.65

GC content: 52.33

Gene sequence:

>1116_bases
GTGAGCGTGTACTGTCGAAGTTCCAAACAGACTGTGCGAGAACCGTGTAGACCTGTCCCCGTAGGGGCACTGTTACTGTT
CGTAACACTGTTGCTCCTTGCTCTTGCCCTTGCGTACTTTGGTGCTCAGGTGGAACCATTGACACCTGCCCTCACGCTCA
CTGAGCAGGAACCACGTCAGGCGTCGGGGTACGTGTCTTCCTTGCTCCGTGCACGTATCGTGCAGGAAGATGCGGAGCCT
GCACTGTACTACACAGTGTACGAAGTGCGTGAAGGTGATGTGGTAGGAAGGATTGCGCAGCGCTATGACATCAGTCAGGA
TGCAATCATTAGTTTGAATAAATTGCGCAGCACACGGGCGCTCCAAGTTGGACAGCTACTAAAAATCCCCTCAGTGGACG
GCATTTTATATACCGTAAAAAACGGCGATACGTTTTCGTCTATAGCGGCGGCGCATCAGATCTCCTTAGAACGATTGGTG
CTGCTTAACACGCCGTCTTCTTCAAAGGAGTCACCTCCTTCAGTGCGTACGCTGGTTTCTCCGTTCTATAATTCAGCTGC
ACGGGAGTCCTGCGTGCCTTTTCCGTTTTCTTCTGCGAAACAGTGGAGGGAAAATACGTCGTTTGACGCAGTGCAGCCAT
TGCAGCCTGCACGCGTACTGTTTTTGCCCGGTGCACATTTAAGCGCACGCGCGTTGCAGGAAATTAATGGTGACTTGTTT
CGTGCTCCTCTTCGCAGTCGGTACTATGTTTCTTCGCGGTATGGATGGCGTAGTGATCCGTTTACCGGTGCCAGAAGTTT
TCACAATGGTTTGGATATGGTGAGTCGGCGGGGTACCCCAGTATATTCGGCGCTCGGAGGGATTGTACGCACGGTTGGAT
ACAGTGCAGTGTATGGTAATTACCTGATTGTGGGGCACCACGCGGGGTATCAGACCCTGTATGGGCATCTGCAGACGGTG
TTGGTTTCAGCAGGTACGCGCGTCACCAGCGCGACAAAAATCGGATTATTGGGAAAAACAGGACGCAGCACGGGACCACA
CCTGCATTTTACAATCTATAAGAATGGCTCCGCGATAAACCCTACCTCCCTACTGCGTATGCGTACCCTTCCGTAG

Upstream 100 bases:

>100_bases
CGCGCGCGCGTGCGTGCGTGGACGCTCTAGACGGTGCGTTAGGTACAGACGCAACCTGCCCGCAGGATACGGCAGTGTGT
ACACCTGAAGGATAGCCGGT

Downstream 100 bases:

>100_bases
TGTGATGTCCTTGGGAGAGTAAAGGGGAAAGAAGGGAGGACTAGTAGTTCGGATACAGCGCAGGTACCAGATACTCGGGG
GGAATCTTAGTTGGTTTGCC

Product: fibronectin binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MSVYCRSSKQTVREPCRPVPVGALLLFVTLLLLALALAYFGAQVEPLTPALTLTEQEPRQASGYVSSLLRARIVQEDAEP
ALYYTVYEVREGDVVGRIAQRYDISQDAIISLNKLRSTRALQVGQLLKIPSVDGILYTVKNGDTFSSIAAAHQISLERLV
LLNTPSSSKESPPSVRTLVSPFYNSAARESCVPFPFSSAKQWRENTSFDAVQPLQPARVLFLPGAHLSARALQEINGDLF
RAPLRSRYYVSSRYGWRSDPFTGARSFHNGLDMVSRRGTPVYSALGGIVRTVGYSAVYGNYLIVGHHAGYQTLYGHLQTV
LVSAGTRVTSATKIGLLGKTGRSTGPHLHFTIYKNGSAINPTSLLRMRTLP

Sequences:

>Translated_371_residues
MSVYCRSSKQTVREPCRPVPVGALLLFVTLLLLALALAYFGAQVEPLTPALTLTEQEPRQASGYVSSLLRARIVQEDAEP
ALYYTVYEVREGDVVGRIAQRYDISQDAIISLNKLRSTRALQVGQLLKIPSVDGILYTVKNGDTFSSIAAAHQISLERLV
LLNTPSSSKESPPSVRTLVSPFYNSAARESCVPFPFSSAKQWRENTSFDAVQPLQPARVLFLPGAHLSARALQEINGDLF
RAPLRSRYYVSSRYGWRSDPFTGARSFHNGLDMVSRRGTPVYSALGGIVRTVGYSAVYGNYLIVGHHAGYQTLYGHLQTV
LVSAGTRVTSATKIGLLGKTGRSTGPHLHFTIYKNGSAINPTSLLRMRTLP
>Mature_370_residues
SVYCRSSKQTVREPCRPVPVGALLLFVTLLLLALALAYFGAQVEPLTPALTLTEQEPRQASGYVSSLLRARIVQEDAEPA
LYYTVYEVREGDVVGRIAQRYDISQDAIISLNKLRSTRALQVGQLLKIPSVDGILYTVKNGDTFSSIAAAHQISLERLVL
LNTPSSSKESPPSVRTLVSPFYNSAARESCVPFPFSSAKQWRENTSFDAVQPLQPARVLFLPGAHLSARALQEINGDLFR
APLRSRYYVSSRYGWRSDPFTGARSFHNGLDMVSRRGTPVYSALGGIVRTVGYSAVYGNYLIVGHHAGYQTLYGHLQTVL
VSAGTRVTSATKIGLLGKTGRSTGPHLHFTIYKNGSAINPTSLLRMRTLP

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=124, Percent_Identity=38.7096774193548, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI87082174, Length=239, Percent_Identity=27.6150627615063, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 40665; Mature: 40534

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVYCRSSKQTVREPCRPVPVGALLLFVTLLLLALALAYFGAQVEPLTPALTLTEQEPRQ
CCEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHH
ASGYVSSLLRARIVQEDAEPALYYTVYEVREGDVVGRIAQRYDISQDAIISLNKLRSTRA
HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LQVGQLLKIPSVDGILYTVKNGDTFSSIAAAHQISLERLVLLNTPSSSKESPPSVRTLVS
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCEEEEEEEECCCCCCCCCCHHHHHHH
PFYNSAARESCVPFPFSSAKQWRENTSFDAVQPLQPARVLFLPGAHLSARALQEINGDLF
HHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCHHH
RAPLRSRYYVSSRYGWRSDPFTGARSFHNGLDMVSRRGTPVYSALGGIVRTVGYSAVYGN
HCCHHHCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECC
YLIVGHHAGYQTLYGHLQTVLVSAGTRVTSATKIGLLGKTGRSTGPHLHFTIYKNGSAIN
EEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHEEEEEECCCCCCCCEEEEEEEECCCCCC
PTSLLRMRTLP
HHHHHEEECCC
>Mature Secondary Structure 
SVYCRSSKQTVREPCRPVPVGALLLFVTLLLLALALAYFGAQVEPLTPALTLTEQEPRQ
CEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHH
ASGYVSSLLRARIVQEDAEPALYYTVYEVREGDVVGRIAQRYDISQDAIISLNKLRSTRA
HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LQVGQLLKIPSVDGILYTVKNGDTFSSIAAAHQISLERLVLLNTPSSSKESPPSVRTLVS
HHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCEEEEEEEECCCCCCCCCCHHHHHHH
PFYNSAARESCVPFPFSSAKQWRENTSFDAVQPLQPARVLFLPGAHLSARALQEINGDLF
HHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCHHH
RAPLRSRYYVSSRYGWRSDPFTGARSFHNGLDMVSRRGTPVYSALGGIVRTVGYSAVYGN
HCCHHHCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECC
YLIVGHHAGYQTLYGHLQTVLVSAGTRVTSATKIGLLGKTGRSTGPHLHFTIYKNGSAIN
EEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHEEEEEECCCCCCCCEEEEEEEECCCCCC
PTSLLRMRTLP
HHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]