| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586521
Identifier: 188586521
GI number: 188586521
Start: 2001288
End: 2002346
Strand: Reverse
Name: 188586521
Synonym: Nther_1907
Alternate gene names: NA
Gene position: 2002346-2001288 (Counterclockwise)
Preceding gene: 188586522
Following gene: 188586520
Centisome position: 63.25
GC content: 33.81
Gene sequence:
>1059_bases GTGAATAATAAAATAATCGATAGTATATTAAATAAATCTATAACCACTTTAGCTATTATTGGAATGGAAAAAAATACAGG TAAAACTGTAACTTTAAATACTGTTATCTCAGAGGCTATGAACAAAGATTTAAGGTTGGCGCTTTTATCTTATGGGCGTG ATGGTGAAGAAGTTGATGCCATTACCAGACACAAAAAACCCAGGGTATATATTCCACCTAGAACCTTATTTCTAACAACT AGTGAAGCTGCAAATAAATCGGAAATAACAACGAAACTTGTTAAAGAACTAGAATACCGTACCACAATGGGTAGAGTGGG AATTTATGAAAGTGGAGATTACGGGGGTAATTGTGAACTTGTCGGGATTAACTCGGCAAACCAAATTTATCAAGTAAAAA AACAGCTGGAAAATCAAATAGACCTATTATTAATCGATGGAGCTTTGGATAGAAAAAGTTCGGCTATGCCTAGCTTAAGT GAAGGTTTTGTATTAGCAACTGGAGCTAATATTGCTAACACTGAGGAGCTAGTGGCTAAAAAAACAATTATTGAAATTGA CAAACTAACTACCCCTGAAATTAATGATGAAGCTTTACAGGTAAAAGCTAGTCAATTACTGGAAAACGGTCATACTGGAG TGATCACTAAAACAGGTGAAGTGGTGAAATTGGCGGAAGGTTGTTCTTTCAGTGAGTATGATTCTATTTGTTCCTATATT TATAGAAACAAAGAATCCTTTCATACTTTGGTGATAAATGGAGCTATAGTTGATAATTTGGTTGAAAAATTGCTGTACTC AGTAAAACTTGATCACGGAAATATCATTGTAAAAGATGGTACAAAGATTTTCTTAAAAGAGCGTACAAAAAACCTTTTAC AATTACGTAATATATCGTTACAAGTATATAATTCTTTGGAGTTAGTTGCTGTTACAGTCAATCCCTGGAGTTCTGATGGG ACATATCTAAACTCCCAATTAATTATCGACCATCTAAAGGAGGATCTATCAGTACCGGTTTACGATTTATTGAGTTCCGA GTACAAAAATCAAACTTAA
Upstream 100 bases:
>100_bases TTGGCATGATTTTTGCAACATTTAATAAATGAAAACAAAGTCTAGAATTGTGACTATTTTAATAAAGACAAGAAAATAAG AAAGGGGGCCAAAGGTAGAT
Downstream 100 bases:
>100_bases ATAAATAACTTAAAAAGAAAGTAAAGGGGTGACGAAATATGGAGGCCAAATTAAAGGTCAATCAAGAGTTAGTTGACAAA AGCAGAAAATATTCTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MNNKIIDSILNKSITTLAIIGMEKNTGKTVTLNTVISEAMNKDLRLALLSYGRDGEEVDAITRHKKPRVYIPPRTLFLTT SEAANKSEITTKLVKELEYRTTMGRVGIYESGDYGGNCELVGINSANQIYQVKKQLENQIDLLLIDGALDRKSSAMPSLS EGFVLATGANIANTEELVAKKTIIEIDKLTTPEINDEALQVKASQLLENGHTGVITKTGEVVKLAEGCSFSEYDSICSYI YRNKESFHTLVINGAIVDNLVEKLLYSVKLDHGNIIVKDGTKIFLKERTKNLLQLRNISLQVYNSLELVAVTVNPWSSDG TYLNSQLIIDHLKEDLSVPVYDLLSSEYKNQT
Sequences:
>Translated_352_residues MNNKIIDSILNKSITTLAIIGMEKNTGKTVTLNTVISEAMNKDLRLALLSYGRDGEEVDAITRHKKPRVYIPPRTLFLTT SEAANKSEITTKLVKELEYRTTMGRVGIYESGDYGGNCELVGINSANQIYQVKKQLENQIDLLLIDGALDRKSSAMPSLS EGFVLATGANIANTEELVAKKTIIEIDKLTTPEINDEALQVKASQLLENGHTGVITKTGEVVKLAEGCSFSEYDSICSYI YRNKESFHTLVINGAIVDNLVEKLLYSVKLDHGNIIVKDGTKIFLKERTKNLLQLRNISLQVYNSLELVAVTVNPWSSDG TYLNSQLIIDHLKEDLSVPVYDLLSSEYKNQT >Mature_352_residues MNNKIIDSILNKSITTLAIIGMEKNTGKTVTLNTVISEAMNKDLRLALLSYGRDGEEVDAITRHKKPRVYIPPRTLFLTT SEAANKSEITTKLVKELEYRTTMGRVGIYESGDYGGNCELVGINSANQIYQVKKQLENQIDLLLIDGALDRKSSAMPSLS EGFVLATGANIANTEELVAKKTIIEIDKLTTPEINDEALQVKASQLLENGHTGVITKTGEVVKLAEGCSFSEYDSICSYI YRNKESFHTLVINGAIVDNLVEKLLYSVKLDHGNIIVKDGTKIFLKERTKNLLQLRNISLQVYNSLELVAVTVNPWSSDG TYLNSQLIIDHLKEDLSVPVYDLLSSEYKNQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39066; Mature: 39066
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKIIDSILNKSITTLAIIGMEKNTGKTVTLNTVISEAMNKDLRLALLSYGRDGEEVDA CCCHHHHHHHCCCCEEEEEEEEECCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHH ITRHKKPRVYIPPRTLFLTTSEAANKSEITTKLVKELEYRTTMGRVGIYESGDYGGNCEL HHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEE VGINSANQIYQVKKQLENQIDLLLIDGALDRKSSAMPSLSEGFVLATGANIANTEELVAK EEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH KTIIEIDKLTTPEINDEALQVKASQLLENGHTGVITKTGEVVKLAEGCSFSEYDSICSYI HHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCHHHHHHHHHH YRNKESFHTLVINGAIVDNLVEKLLYSVKLDHGNIIVKDGTKIFLKERTKNLLQLRNISL HCCCCCEEEEEEEHHHHHHHHHHHHHHEEECCCCEEEECCCEEEEHHHHHHHHHHHHCEE QVYNSLELVAVTVNPWSSDGTYLNSQLIIDHLKEDLSVPVYDLLSSEYKNQT EEECCEEEEEEEECCCCCCCCEECHHHHHHHHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure MNNKIIDSILNKSITTLAIIGMEKNTGKTVTLNTVISEAMNKDLRLALLSYGRDGEEVDA CCCHHHHHHHCCCCEEEEEEEEECCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHH ITRHKKPRVYIPPRTLFLTTSEAANKSEITTKLVKELEYRTTMGRVGIYESGDYGGNCEL HHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEE VGINSANQIYQVKKQLENQIDLLLIDGALDRKSSAMPSLSEGFVLATGANIANTEELVAK EEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH KTIIEIDKLTTPEINDEALQVKASQLLENGHTGVITKTGEVVKLAEGCSFSEYDSICSYI HHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCHHHHHHHHHH YRNKESFHTLVINGAIVDNLVEKLLYSVKLDHGNIIVKDGTKIFLKERTKNLLQLRNISL HCCCCCEEEEEEEHHHHHHHHHHHHHHEEECCCCEEEECCCEEEEHHHHHHHHHHHHCEE QVYNSLELVAVTVNPWSSDGTYLNSQLIIDHLKEDLSVPVYDLLSSEYKNQT EEECCEEEEEEEECCCCCCCCEECHHHHHHHHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA