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The map label for this gene is ymfF [H]

Identifier: 188586511

GI number: 188586511

Start: 1989694

End: 1990989

Strand: Reverse

Name: ymfF [H]

Synonym: Nther_1897

Alternate gene names: 188586511

Gene position: 1990989-1989694 (Counterclockwise)

Preceding gene: 188586512

Following gene: 188586510

Centisome position: 62.9

GC content: 33.26

Gene sequence:

>1296_bases
ATGGATATGAGTCAAACAGAGTTAGATACGGGTATAAGGCTCCACTATATCCCAAAAACTAACTTAAAAACAACTTTAAT
AAAAGTATTCTTTCACTGGCCTTTAGGAGATTATAACGGTCACATGGCTGTTATCCCTAAAGTTTTAGAGCGAGGACCTA
GTCCCTATCCATCAATTACAGAATTTTATCGTCAATTAGAGGAAATGTACGGAGCGGAATTAGTGACTGGTGTTCACAAA
AAAGGAGAACGTCAGATGATAGAGTTTAGGTTAGAAACAGTTAGCCAAGACTTTTTATTGGAACAGGGAAAACAATATGT
TAATTTAGATAAAGTTATTAAACTTATGAGTCAGGTTATCTTTGAGCCAGTAACAAAAGGGGCTGGATTTAAAAAAGAAT
TGGTTGAACAGGAAAAGAAAAACCAGATTGACCGGATAAAGAAATTGAAAGATGATAAAACAAATTATGCTGTAGAAAGA
TTAATTGCACATATGTGTGAAAATGAACCTTTCAGTAAATCAAAATTTGGCACAGAAGAGGAAGTAAAGAGCATAACTCC
ATATAGTCTTTATGAACAGTACAGGAAACTATTATCTTCTGCTCCTATTGATATCTTTGTAGTAGGACATTTTTCGCAGG
AAGAACTGAATTCTGCTATTCAAAAACATTTTAATTTTCCTGATCGAGAAAACATCCCTAATTTTACAACAGAGATTATA
AAAGATGTAGATGAAACAAAAGAGGTTAAAGAAAATGAAAAAATTAACCAAAGCAAATTATGCTTAGGGTTCAGAACACA
AATTTCTTTCAAAGATGAATTGATATTCCCATTAATGCTATTTAACGGTGTATTAGGAGGATTCTCCCATTCCAGGCTAT
TTCGAGTAGTCAGAGAACAACATAGTTTATGTTATTATGTTTTATCTAGATTGGAAAAAAGTAAAGGTGTTATGGTTGTT
AATGCCGGAATCCAAAAGGAAGATTATGAAAAAACGGTGGAATTAATCACAAAAGAATTAGAAAAATTGAGACAGGATGA
TATACAAGATAAAGAGTTGGATATGACTAAACAGTCCCTGTTGTCAGCTATGAGACAGATTGAAGACAATCCTGATGCTA
TCTGTGAAACAATTTTAGAAGGTATTATCAATGACAGAGTCATGACACCTGAGGAGATTAAAGAAAAGATTGCAAATGTA
GACCGGGATAGAATACTAACTGCTGCTCAAAAAGTAGCATTAGATACAGTTTATATTATGGCAGATGCAAAACAAGAAAA
GGTGGGTGTTACATAA

Upstream 100 bases:

>100_bases
TTATCAGGTAAACTAAGAGCTAGTTAATACTATACCTGAAATAAACCTTTATTCGAATTTTGTATTGTAATAAATCATAC
ATAAGCGAAAGGAGAATTCT

Downstream 100 bases:

>100_bases
TGAGAACCATTGAAAAAACTCAGGAACGATTTCATCCTTTATTAAAAGAAACCATTTATTATGATAAAATATCCCCTGGA
CTTGACACCTATGTATTTCC

Product: peptidase M16 domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MDMSQTELDTGIRLHYIPKTNLKTTLIKVFFHWPLGDYNGHMAVIPKVLERGPSPYPSITEFYRQLEEMYGAELVTGVHK
KGERQMIEFRLETVSQDFLLEQGKQYVNLDKVIKLMSQVIFEPVTKGAGFKKELVEQEKKNQIDRIKKLKDDKTNYAVER
LIAHMCENEPFSKSKFGTEEEVKSITPYSLYEQYRKLLSSAPIDIFVVGHFSQEELNSAIQKHFNFPDRENIPNFTTEII
KDVDETKEVKENEKINQSKLCLGFRTQISFKDELIFPLMLFNGVLGGFSHSRLFRVVREQHSLCYYVLSRLEKSKGVMVV
NAGIQKEDYEKTVELITKELEKLRQDDIQDKELDMTKQSLLSAMRQIEDNPDAICETILEGIINDRVMTPEEIKEKIANV
DRDRILTAAQKVALDTVYIMADAKQEKVGVT

Sequences:

>Translated_431_residues
MDMSQTELDTGIRLHYIPKTNLKTTLIKVFFHWPLGDYNGHMAVIPKVLERGPSPYPSITEFYRQLEEMYGAELVTGVHK
KGERQMIEFRLETVSQDFLLEQGKQYVNLDKVIKLMSQVIFEPVTKGAGFKKELVEQEKKNQIDRIKKLKDDKTNYAVER
LIAHMCENEPFSKSKFGTEEEVKSITPYSLYEQYRKLLSSAPIDIFVVGHFSQEELNSAIQKHFNFPDRENIPNFTTEII
KDVDETKEVKENEKINQSKLCLGFRTQISFKDELIFPLMLFNGVLGGFSHSRLFRVVREQHSLCYYVLSRLEKSKGVMVV
NAGIQKEDYEKTVELITKELEKLRQDDIQDKELDMTKQSLLSAMRQIEDNPDAICETILEGIINDRVMTPEEIKEKIANV
DRDRILTAAQKVALDTVYIMADAKQEKVGVT
>Mature_431_residues
MDMSQTELDTGIRLHYIPKTNLKTTLIKVFFHWPLGDYNGHMAVIPKVLERGPSPYPSITEFYRQLEEMYGAELVTGVHK
KGERQMIEFRLETVSQDFLLEQGKQYVNLDKVIKLMSQVIFEPVTKGAGFKKELVEQEKKNQIDRIKKLKDDKTNYAVER
LIAHMCENEPFSKSKFGTEEEVKSITPYSLYEQYRKLLSSAPIDIFVVGHFSQEELNSAIQKHFNFPDRENIPNFTTEII
KDVDETKEVKENEKINQSKLCLGFRTQISFKDELIFPLMLFNGVLGGFSHSRLFRVVREQHSLCYYVLSRLEKSKGVMVV
NAGIQKEDYEKTVELITKELEKLRQDDIQDKELDMTKQSLLSAMRQIEDNPDAICETILEGIINDRVMTPEEIKEKIANV
DRDRILTAAQKVALDTVYIMADAKQEKVGVT

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 49880; Mature: 49880

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMSQTELDTGIRLHYIPKTNLKTTLIKVFFHWPLGDYNGHMAVIPKVLERGPSPYPSIT
CCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHH
EFYRQLEEMYGAELVTGVHKKGERQMIEFRLETVSQDFLLEQGKQYVNLDKVIKLMSQVI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHH
FEPVTKGAGFKKELVEQEKKNQIDRIKKLKDDKTNYAVERLIAHMCENEPFSKSKFGTEE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
EVKSITPYSLYEQYRKLLSSAPIDIFVVGHFSQEELNSAIQKHFNFPDRENIPNFTTEII
HHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
KDVDETKEVKENEKINQSKLCLGFRTQISFKDELIFPLMLFNGVLGGFSHSRLFRVVREQ
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
HSLCYYVLSRLEKSKGVMVVNAGIQKEDYEKTVELITKELEKLRQDDIQDKELDMTKQSL
HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LSAMRQIEDNPDAICETILEGIINDRVMTPEEIKEKIANVDRDRILTAAQKVALDTVYIM
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEE
ADAKQEKVGVT
ECCCHHCCCCC
>Mature Secondary Structure
MDMSQTELDTGIRLHYIPKTNLKTTLIKVFFHWPLGDYNGHMAVIPKVLERGPSPYPSIT
CCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHH
EFYRQLEEMYGAELVTGVHKKGERQMIEFRLETVSQDFLLEQGKQYVNLDKVIKLMSQVI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHH
FEPVTKGAGFKKELVEQEKKNQIDRIKKLKDDKTNYAVERLIAHMCENEPFSKSKFGTEE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
EVKSITPYSLYEQYRKLLSSAPIDIFVVGHFSQEELNSAIQKHFNFPDRENIPNFTTEII
HHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
KDVDETKEVKENEKINQSKLCLGFRTQISFKDELIFPLMLFNGVLGGFSHSRLFRVVREQ
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
HSLCYYVLSRLEKSKGVMVVNAGIQKEDYEKTVELITKELEKLRQDDIQDKELDMTKQSL
HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LSAMRQIEDNPDAICETILEGIINDRVMTPEEIKEKIANVDRDRILTAAQKVALDTVYIM
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEE
ADAKQEKVGVT
ECCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]