Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
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Accession | NC_010718 |
Length | 3,165,557 |
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The map label for this gene is yheO [C]
Identifier: 188586418
GI number: 188586418
Start: 1867438
End: 1868103
Strand: Reverse
Name: yheO [C]
Synonym: Nther_1803
Alternate gene names: 188586418
Gene position: 1868103-1867438 (Counterclockwise)
Preceding gene: 188586419
Following gene: 188586417
Centisome position: 59.01
GC content: 31.83
Gene sequence:
>666_bases ATGGAAGTAAATTACAATGAAATTTCAGAAAAGTTAAAACCCTTTTTGCCAATTGTCGAAGGTATTGCAACAACTTTCGG TAAACATTGTGAAGTGGTTTTACATGATATTAATCAAGCTCATACGAGCATTGTGGCAATAGCTAATGGACATGTTACAA GTCGGGGTATCGGTGGTCCACCTACAGACTATCTATCAGAAATACTTAATCAAGAAAAAGAAAAACGAGAACATAACAAT AAACTTTTTAATTATAAAACGAGAAGTAAAGATGGCAAAGATTTAAAATCCACTACTATTTTATTGACCGATGAATGTAA TGACCTGATCGGAGCTTTATGTATAAATATGGATCTAACGTCACCAAAAATGGCACTAACCTTTTTGGAAAATTTAATTC AGATAGATAAAGAAGAAGAAAGAGAAAAATTCCCCGAAAATGTTAACGATTTTTTAAAGGTAATGATAGACAAAAGTATT GGCTCTTTAGACAAACCTGTGAATCTGCTTTCAAAGGAAGAAAAGTTGGAAGTAATCCGTTATCTTGATCGCCATAGAAT TTTCCAAATTAAAGGTTCAATTGATTTGCTAGCTAAAGAGTTAAATGTTTCTAGATATACAATTTACAATTATCTAGATG AAGTGGCTGCCGAAAAAGAATTATGA
Upstream 100 bases:
>100_bases CGTTGAATTACTAAAATTTTGTAAGCTTTGTTGACATTTTGGAAATGCTTTGGTATTATAAATTATAGTTATGATAGGAA AGATATAGGAGGAAACTATT
Downstream 100 bases:
>100_bases TAGTTGTTTGCTTAGCTAAGCCCTTGATAATAGGGTTTATATAATTAATACACTAAGGAGGTTATTTACATGTCAAGAGA GTTTCAAGCAGAACCTTTCA
Product: YheO domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MEVNYNEISEKLKPFLPIVEGIATTFGKHCEVVLHDINQAHTSIVAIANGHVTSRGIGGPPTDYLSEILNQEKEKREHNN KLFNYKTRSKDGKDLKSTTILLTDECNDLIGALCINMDLTSPKMALTFLENLIQIDKEEEREKFPENVNDFLKVMIDKSI GSLDKPVNLLSKEEKLEVIRYLDRHRIFQIKGSIDLLAKELNVSRYTIYNYLDEVAAEKEL
Sequences:
>Translated_221_residues MEVNYNEISEKLKPFLPIVEGIATTFGKHCEVVLHDINQAHTSIVAIANGHVTSRGIGGPPTDYLSEILNQEKEKREHNN KLFNYKTRSKDGKDLKSTTILLTDECNDLIGALCINMDLTSPKMALTFLENLIQIDKEEEREKFPENVNDFLKVMIDKSI GSLDKPVNLLSKEEKLEVIRYLDRHRIFQIKGSIDLLAKELNVSRYTIYNYLDEVAAEKEL >Mature_221_residues MEVNYNEISEKLKPFLPIVEGIATTFGKHCEVVLHDINQAHTSIVAIANGHVTSRGIGGPPTDYLSEILNQEKEKREHNN KLFNYKTRSKDGKDLKSTTILLTDECNDLIGALCINMDLTSPKMALTFLENLIQIDKEEEREKFPENVNDFLKVMIDKSI GSLDKPVNLLSKEEKLEVIRYLDRHRIFQIKGSIDLLAKELNVSRYTIYNYLDEVAAEKEL
Specific function: Unknown
COG id: COG2964
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yheO [H]
Homologues:
Organism=Escherichia coli, GI87082246, Length=205, Percent_Identity=31.219512195122, Blast_Score=98, Evalue=5e-22,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013559 - ProDom: PD037769 [H]
Pfam domain/function: PF08348 PAS_6 [H]
EC number: NA
Molecular weight: Translated: 25251; Mature: 25251
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVNYNEISEKLKPFLPIVEGIATTFGKHCEVVLHDINQAHTSIVAIANGHVTSRGIGGP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCCCC PTDYLSEILNQEKEKREHNNKLFNYKTRSKDGKDLKSTTILLTDECNDLIGALCINMDLT CHHHHHHHHHHHHHHHHHCCCEECEECCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCC SPKMALTFLENLIQIDKEEEREKFPENVNDFLKVMIDKSIGSLDKPVNLLSKEEKLEVIR CHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH YLDRHRIFQIKGSIDLLAKELNVSRYTIYNYLDEVAAEKEL HHHHHHEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEVNYNEISEKLKPFLPIVEGIATTFGKHCEVVLHDINQAHTSIVAIANGHVTSRGIGGP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCCCC PTDYLSEILNQEKEKREHNNKLFNYKTRSKDGKDLKSTTILLTDECNDLIGALCINMDLT CHHHHHHHHHHHHHHHHHCCCEECEECCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCC SPKMALTFLENLIQIDKEEEREKFPENVNDFLKVMIDKSIGSLDKPVNLLSKEEKLEVIR CHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH YLDRHRIFQIKGSIDLLAKELNVSRYTIYNYLDEVAAEKEL HHHHHHEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]