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The map label for this gene is 188586362

Identifier: 188586362

GI number: 188586362

Start: 1811868

End: 1812779

Strand: Reverse

Name: 188586362

Synonym: Nther_1745

Alternate gene names: NA

Gene position: 1812779-1811868 (Counterclockwise)

Preceding gene: 188586364

Following gene: 188586361

Centisome position: 57.27

GC content: 34.32

Gene sequence:

>912_bases
ATGGTACATAACTACTTACCTGGATACTTGAAATTATTTGAAGCGGGAAAATTGGAAAAACTAAGACAGAATGCTTATCA
AGAATTGGAAAATTGCACAATTTGTCCCCATAATTGTCAAGTTAACAGATTAAATGGACAAATAGGGTTCTGCCAAACTG
GTGAATATGTTCGGATTGCCTCATTTTTCCCTCATTTAGGAGAAGAGGGACCTTTGGTTGGGAATAAGGGGTCTGGTACT
ATATTTTTTTCGTATTGCAATTTGAAATGTACTTTTTGTCAGAATTATGATATTAGCCATTATGGTAATGGTGAGCTGAT
ATCATTGGAAAAATTAGCCAGAATAATGGTCAAATTACAAAACACTGGTTGTCACAATATCAACTTGGTTTCTCCATCCC
ATTTTATCCCCCAGATAATCTCGGCTTTGTATGAAGCTAGTAAAATGGGACTAAAAATACCTGTGGTCTATAACAGCGGA
GGTTTTGACTCAATTAAGGGTTTGAAGTATCTTGATGGAATAATTGATATTTACTTACCTGATATTAAATTCGGTAGTGA
TGAAACTGCATATTATTATACAAAAGCTACTAATTATTTTCAGGTAGTTAATAAAGCTGTTAGTGAAATGTTTAGACAGG
TAGGTCCTTTAAAAACTGATAAACATGGTATTGCTTATCAAGGGTTGATTGTTAGGCACTTGGTTTTACCTAAAAATCTA
GCTGAATCAAAACAAGTCTTTGAAATGCTTGCAGATATTTCTCAAGATATTACAGTAAATGTTATGGGACAATATTATCC
AGCATACCAAGCTCATCAGGATGAGTTACTGTCCCAACCACCAACTATCAAGGATATTAAAGCAGCTAGAAAATCAGCCC
ATGATAGAGGACTTAATCTTTTGGATGATTGA

Upstream 100 bases:

>100_bases
CTCCCCTTTTTGGGTTGTGAGATTTTTCATACTTCCATTATAATTTTATCACAACGGGTTTATTAGCAAAAGATTGTCAG
AATACTTTGGAGGGAGTCAA

Downstream 100 bases:

>100_bases
TAAGAGGTGATATAATGTTATTATCCCATGTGTATTCAGGGTTTAGATGGATATATTATGGTTGTTCTTTTATTAAAAGA
ACTTTAACCAGGCCCGCGGA

Product: Radical SAM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MVHNYLPGYLKLFEAGKLEKLRQNAYQELENCTICPHNCQVNRLNGQIGFCQTGEYVRIASFFPHLGEEGPLVGNKGSGT
IFFSYCNLKCTFCQNYDISHYGNGELISLEKLARIMVKLQNTGCHNINLVSPSHFIPQIISALYEASKMGLKIPVVYNSG
GFDSIKGLKYLDGIIDIYLPDIKFGSDETAYYYTKATNYFQVVNKAVSEMFRQVGPLKTDKHGIAYQGLIVRHLVLPKNL
AESKQVFEMLADISQDITVNVMGQYYPAYQAHQDELLSQPPTIKDIKAARKSAHDRGLNLLDD

Sequences:

>Translated_303_residues
MVHNYLPGYLKLFEAGKLEKLRQNAYQELENCTICPHNCQVNRLNGQIGFCQTGEYVRIASFFPHLGEEGPLVGNKGSGT
IFFSYCNLKCTFCQNYDISHYGNGELISLEKLARIMVKLQNTGCHNINLVSPSHFIPQIISALYEASKMGLKIPVVYNSG
GFDSIKGLKYLDGIIDIYLPDIKFGSDETAYYYTKATNYFQVVNKAVSEMFRQVGPLKTDKHGIAYQGLIVRHLVLPKNL
AESKQVFEMLADISQDITVNVMGQYYPAYQAHQDELLSQPPTIKDIKAARKSAHDRGLNLLDD
>Mature_303_residues
MVHNYLPGYLKLFEAGKLEKLRQNAYQELENCTICPHNCQVNRLNGQIGFCQTGEYVRIASFFPHLGEEGPLVGNKGSGT
IFFSYCNLKCTFCQNYDISHYGNGELISLEKLARIMVKLQNTGCHNINLVSPSHFIPQIISALYEASKMGLKIPVVYNSG
GFDSIKGLKYLDGIIDIYLPDIKFGSDETAYYYTKATNYFQVVNKAVSEMFRQVGPLKTDKHGIAYQGLIVRHLVLPKNL
AESKQVFEMLADISQDITVNVMGQYYPAYQAHQDELLSQPPTIKDIKAARKSAHDRGLNLLDD

Specific function: Unknown

COG id: COG1313

COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 34080; Mature: 34080

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHNYLPGYLKLFEAGKLEKLRQNAYQELENCTICPHNCQVNRLNGQIGFCQTGEYVRIA
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCCEEEHH
SFFPHLGEEGPLVGNKGSGTIFFSYCNLKCTFCQNYDISHYGNGELISLEKLARIMVKLQ
HHHCCCCCCCCEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHH
NTGCHNINLVSPSHFIPQIISALYEASKMGLKIPVVYNSGGFDSIKGLKYLDGIIDIYLP
CCCCCEEEEECCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHEEEEC
DIKFGSDETAYYYTKATNYFQVVNKAVSEMFRQVGPLKTDKHGIAYQGLIVRHLVLPKNL
CEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHH
AESKQVFEMLADISQDITVNVMGQYYPAYQAHQDELLSQPPTIKDIKAARKSAHDRGLNL
HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
LDD
CCC
>Mature Secondary Structure
MVHNYLPGYLKLFEAGKLEKLRQNAYQELENCTICPHNCQVNRLNGQIGFCQTGEYVRIA
CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCCEEEHH
SFFPHLGEEGPLVGNKGSGTIFFSYCNLKCTFCQNYDISHYGNGELISLEKLARIMVKLQ
HHHCCCCCCCCEECCCCCCEEEEEEECEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHH
NTGCHNINLVSPSHFIPQIISALYEASKMGLKIPVVYNSGGFDSIKGLKYLDGIIDIYLP
CCCCCEEEEECCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHEEEEC
DIKFGSDETAYYYTKATNYFQVVNKAVSEMFRQVGPLKTDKHGIAYQGLIVRHLVLPKNL
CEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHH
AESKQVFEMLADISQDITVNVMGQYYPAYQAHQDELLSQPPTIKDIKAARKSAHDRGLNL
HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
LDD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]