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The map label for this gene is yitS [H]

Identifier: 188586360

GI number: 188586360

Start: 1809201

End: 1810046

Strand: Reverse

Name: yitS [H]

Synonym: Nther_1743

Alternate gene names: 188586360

Gene position: 1810046-1809201 (Counterclockwise)

Preceding gene: 188586361

Following gene: 188586359

Centisome position: 57.18

GC content: 34.63

Gene sequence:

>846_bases
ATGATTAAAATTCTAACTGATAGTGCTAGTGACTTGCCAGAAAAAATTATTAAACGTTATAAAATAGATGTATTGCCATT
TGTGATAAATTTAAATGGTAGGGAGTATAGAGATGGTATAGACATCAATTCTAAAGATATTTTTCAGGCTATTAGGGAGG
GAAAAGAAGTTTTTACATCCCAAGTACCTCAAAATATATTGTATCAAAGGTTGGAAACTTATGCATCTCAGGGATTCGAT
TGTCTCTATATTGGTTTTTCTTCAAAATTATCAGGTACTTATCAAACTGCCAGAATGATAGCCAAGGAAGTGGATGAAAA
ATTTCCTGAAGTAAATGTAGCGACTGTAGATAGTTTGGCTGGATCATTGGCACAAGGCATGATAGTTGAGAGAGCAGCTA
TCATGAAAGAAAACGGAGCTTCCTTGCATAACATCATTCAAAAAATACAACAACAAACTAAGAAGGTAGAACATATATTT
TCAATAGATGATTTAAAACATTTGTACCGAGGTGGTAGGATTAGACTTAGCAGTGCCTGGCTAGGTTCTGTTTTAAAAAT
CAAACCGGTGCTTCATGTAACGGATGGGAAAATTGAACCTTTGGAAAAGCAAAGAGGGAATAAACGCTTGTTGAGAAGAA
TTGTCGATATAGTTGATGAACGAGGTGATAATCTAAGTCATCAGACAATTGGTATAGCCCATGCTGATGATGAAAATAAA
GCTTTGCAGTTGAGAAATATGCTAATGGAAAGGTTAAATTGTAAGCAATTTGTAATCAATCAAATAGGTTGTGTATTGAG
TGCTCATTTAGGTGTTGGAGGAGTAGGAGTGTTCTTTAATGCTTAG

Upstream 100 bases:

>100_bases
TAGAAGTTAGAAGTTGATAACTAAAGAATATCAATTCGCTAAGCTTATGAATTTATTAATGTAAGGATTAATGCAAAAAT
TATAAGGGAGGGGAGAGGAC

Downstream 100 bases:

>100_bases
TTACAAGAAAGATTTTGTTTTCGTGAGGTGAAAACAATGGACGTCTGCTCCAAAAAAAACCTTAGGTTTTTAAAAGTAAC
ATCTATTTTGGTAATCTTGG

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MIKILTDSASDLPEKIIKRYKIDVLPFVINLNGREYRDGIDINSKDIFQAIREGKEVFTSQVPQNILYQRLETYASQGFD
CLYIGFSSKLSGTYQTARMIAKEVDEKFPEVNVATVDSLAGSLAQGMIVERAAIMKENGASLHNIIQKIQQQTKKVEHIF
SIDDLKHLYRGGRIRLSSAWLGSVLKIKPVLHVTDGKIEPLEKQRGNKRLLRRIVDIVDERGDNLSHQTIGIAHADDENK
ALQLRNMLMERLNCKQFVINQIGCVLSAHLGVGGVGVFFNA

Sequences:

>Translated_281_residues
MIKILTDSASDLPEKIIKRYKIDVLPFVINLNGREYRDGIDINSKDIFQAIREGKEVFTSQVPQNILYQRLETYASQGFD
CLYIGFSSKLSGTYQTARMIAKEVDEKFPEVNVATVDSLAGSLAQGMIVERAAIMKENGASLHNIIQKIQQQTKKVEHIF
SIDDLKHLYRGGRIRLSSAWLGSVLKIKPVLHVTDGKIEPLEKQRGNKRLLRRIVDIVDERGDNLSHQTIGIAHADDENK
ALQLRNMLMERLNCKQFVINQIGCVLSAHLGVGGVGVFFNA
>Mature_281_residues
MIKILTDSASDLPEKIIKRYKIDVLPFVINLNGREYRDGIDINSKDIFQAIREGKEVFTSQVPQNILYQRLETYASQGFD
CLYIGFSSKLSGTYQTARMIAKEVDEKFPEVNVATVDSLAGSLAQGMIVERAAIMKENGASLHNIIQKIQQQTKKVEHIF
SIDDLKHLYRGGRIRLSSAWLGSVLKIKPVLHVTDGKIEPLEKQRGNKRLLRRIVDIVDERGDNLSHQTIGIAHADDENK
ALQLRNMLMERLNCKQFVINQIGCVLSAHLGVGGVGVFFNA

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31591; Mature: 31591

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKILTDSASDLPEKIIKRYKIDVLPFVINLNGREYRDGIDINSKDIFQAIREGKEVFTS
CEEEECCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QVPQNILYQRLETYASQGFDCLYIGFSSKLSGTYQTARMIAKEVDEKFPEVNVATVDSLA
HCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GSLAQGMIVERAAIMKENGASLHNIIQKIQQQTKKVEHIFSIDDLKHLYRGGRIRLSSAW
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHH
LGSVLKIKPVLHVTDGKIEPLEKQRGNKRLLRRIVDIVDERGDNLSHQTIGIAHADDENK
HHHHHEEEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHH
ALQLRNMLMERLNCKQFVINQIGCVLSAHLGVGGVGVFFNA
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure
MIKILTDSASDLPEKIIKRYKIDVLPFVINLNGREYRDGIDINSKDIFQAIREGKEVFTS
CEEEECCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QVPQNILYQRLETYASQGFDCLYIGFSSKLSGTYQTARMIAKEVDEKFPEVNVATVDSLA
HCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GSLAQGMIVERAAIMKENGASLHNIIQKIQQQTKKVEHIFSIDDLKHLYRGGRIRLSSAW
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHH
LGSVLKIKPVLHVTDGKIEPLEKQRGNKRLLRRIVDIVDERGDNLSHQTIGIAHADDENK
HHHHHEEEEEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHH
ALQLRNMLMERLNCKQFVINQIGCVLSAHLGVGGVGVFFNA
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9025291; 9353931; 9384377 [H]