| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is spoVAD [H]
Identifier: 188586275
GI number: 188586275
Start: 1736354
End: 1737397
Strand: Reverse
Name: spoVAD [H]
Synonym: Nther_1658
Alternate gene names: 188586275
Gene position: 1737397-1736354 (Counterclockwise)
Preceding gene: 188586276
Following gene: 188586274
Centisome position: 54.88
GC content: 37.74
Gene sequence:
>1044_bases ATGAGTTCACATGCCGCCAGGAAAAAAATTGGTCAACAGACTAGTTATCTACAATATAGTCCGACGATTAAAGGTACGGG AACAGTAGTTGGACCAAAGGAAGGGAATGGTCCTTTAGCTATAAATTTTCATGAGATAACTCAAGATGAGCTACTTGGAA TGTCAAGTTGGGAACAAGCAGAAAGTGAATTTTTGTATAGAGCTTGCCAGCATGCTTTGGGAAATGCGAAACTCGACTTA AATCAAATAGATTATCTTTTCTCTGGTGACTTATTAAATCAGACAGTATCATCTAATTTAGTAGCAAAAAAATTACAAAT ACCATATTTTGGGTTATTTGGTGCTTGTTCTACTATGGCCGAGGGTTTACTACTATCCTCAATCATGGTTGATGGAGGAA TGGCTTCAAATGTTTTAACAGCCACATCTAGCCATAATAAAGGTTTAGAGAGACAGTTTAGATTTCCGACTGAATATGGA GGTCAGCGACCACCTTATGCTCAATGGACAGTTTCAGGTGGCGGAGCTGCCATAATTTCTCATCAAGGTAATGGACCTTA TGTTTCCTATGTTACACCAGGTAAAGTAATGGATTGGGGAGTTTCAGATGCCTATGACCTAGGATCAGCCATGGCTCCAG CTGCTTATGATACTTTAAAACAACATTTATCTGATACTGGACAGAACGTAACTGACTACGACATGATCGTGACTGGAGAT TTGGGAATACAGGGTACTACTATGTTTAAAGAACTTTGTGAAAATGATGGAATAAATGTTCAAGATAACCATTATGATTG TGGTGTTATGATTTTTGATAGTAATCAAGATGTACACGCTGGGGCTAGCGGATGTGCTTGTTCAGCAGTAGTTACTTACA GCTATATCTACAATTTATTTCAGAACAATAAAATAAATCGGGCTCTTGTTATGGCTACTGGTGCTTTACATAACCCTCAA ATTGTTCAACAAAATATAACTATTCCCACAATTTGTCATGCAGTTGCTTTAGAACAACAAAAGATTGGTGATTCAAATGG GTAG
Upstream 100 bases:
>100_bases ATGTTTATATTGGCCGGTTCTGTCATCGTCTATGGAGTGGTGACAGCTTTTATTATTGGTCTGATTTCAGCAATAATTTA ATATTGAAAGGAGCAGTAAG
Downstream 100 bases:
>100_bases TTATTTAACAGCTTTTTTTGTGGGAGGTTTATTCTGTATAGTTGGTCAGTTATTGTTAGATCTAACTAGAATGACTCCAG CTCATGTTTTAGTAACCTTT
Product: stage V sporulation protein AD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MSSHAARKKIGQQTSYLQYSPTIKGTGTVVGPKEGNGPLAINFHEITQDELLGMSSWEQAESEFLYRACQHALGNAKLDL NQIDYLFSGDLLNQTVSSNLVAKKLQIPYFGLFGACSTMAEGLLLSSIMVDGGMASNVLTATSSHNKGLERQFRFPTEYG GQRPPYAQWTVSGGGAAIISHQGNGPYVSYVTPGKVMDWGVSDAYDLGSAMAPAAYDTLKQHLSDTGQNVTDYDMIVTGD LGIQGTTMFKELCENDGINVQDNHYDCGVMIFDSNQDVHAGASGCACSAVVTYSYIYNLFQNNKINRALVMATGALHNPQ IVQQNITIPTICHAVALEQQKIGDSNG
Sequences:
>Translated_347_residues MSSHAARKKIGQQTSYLQYSPTIKGTGTVVGPKEGNGPLAINFHEITQDELLGMSSWEQAESEFLYRACQHALGNAKLDL NQIDYLFSGDLLNQTVSSNLVAKKLQIPYFGLFGACSTMAEGLLLSSIMVDGGMASNVLTATSSHNKGLERQFRFPTEYG GQRPPYAQWTVSGGGAAIISHQGNGPYVSYVTPGKVMDWGVSDAYDLGSAMAPAAYDTLKQHLSDTGQNVTDYDMIVTGD LGIQGTTMFKELCENDGINVQDNHYDCGVMIFDSNQDVHAGASGCACSAVVTYSYIYNLFQNNKINRALVMATGALHNPQ IVQQNITIPTICHAVALEQQKIGDSNG >Mature_346_residues SSHAARKKIGQQTSYLQYSPTIKGTGTVVGPKEGNGPLAINFHEITQDELLGMSSWEQAESEFLYRACQHALGNAKLDLN QIDYLFSGDLLNQTVSSNLVAKKLQIPYFGLFGACSTMAEGLLLSSIMVDGGMASNVLTATSSHNKGLERQFRFPTEYGG QRPPYAQWTVSGGGAAIISHQGNGPYVSYVTPGKVMDWGVSDAYDLGSAMAPAAYDTLKQHLSDTGQNVTDYDMIVTGDL GIQGTTMFKELCENDGINVQDNHYDCGVMIFDSNQDVHAGASGCACSAVVTYSYIYNLFQNNKINRALVMATGALHNPQI VQQNITIPTICHAVALEQQKIGDSNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010894 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF07451 SpoVAD [H]
EC number: NA
Molecular weight: Translated: 37376; Mature: 37245
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHAARKKIGQQTSYLQYSPTIKGTGTVVGPKEGNGPLAINFHEITQDELLGMSSWEQA CCCHHHHHHHCCCCCEEEECCCCCCCCEEECCCCCCCCEEEEEHHCCHHHHCCCCCHHHH ESEFLYRACQHALGNAKLDLNQIDYLFSGDLLNQTVSSNLVAKKLQIPYFGLFGACSTMA HHHHHHHHHHHHHCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EGLLLSSIMVDGGMASNVLTATSSHNKGLERQFRFPTEYGGQRPPYAQWTVSGGGAAIIS HHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHCCCCHHCCCCCCCCEEEEECCCCEEEEE HQGNGPYVSYVTPGKVMDWGVSDAYDLGSAMAPAAYDTLKQHLSDTGQNVTDYDMIVTGD ECCCCCEEEEECCCCEEECCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECC LGIQGTTMFKELCENDGINVQDNHYDCGVMIFDSNQDVHAGASGCACSAVVTYSYIYNLF CCCCHHHHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH QNNKINRALVMATGALHNPQIVQQNITIPTICHAVALEQQKIGDSNG HCCCCCEEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SSHAARKKIGQQTSYLQYSPTIKGTGTVVGPKEGNGPLAINFHEITQDELLGMSSWEQA CCHHHHHHHCCCCCEEEECCCCCCCCEEECCCCCCCCEEEEEHHCCHHHHCCCCCHHHH ESEFLYRACQHALGNAKLDLNQIDYLFSGDLLNQTVSSNLVAKKLQIPYFGLFGACSTMA HHHHHHHHHHHHHCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EGLLLSSIMVDGGMASNVLTATSSHNKGLERQFRFPTEYGGQRPPYAQWTVSGGGAAIIS HHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHCCCCHHCCCCCCCCEEEEECCCCEEEEE HQGNGPYVSYVTPGKVMDWGVSDAYDLGSAMAPAAYDTLKQHLSDTGQNVTDYDMIVTGD ECCCCCEEEEECCCCEEECCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECC LGIQGTTMFKELCENDGINVQDNHYDCGVMIFDSNQDVHAGASGCACSAVVTYSYIYNLF CCCCHHHHHHHHHHCCCCCEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH QNNKINRALVMATGALHNPQIVQQNITIPTICHAVALEQQKIGDSNG HCCCCCEEEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3926949; 8969508; 9384377 [H]