Click here to switch to the map view.

The map label for this gene is 188586209

Identifier: 188586209

GI number: 188586209

Start: 1669290

End: 1669556

Strand: Reverse

Name: 188586209

Synonym: Nther_1592

Alternate gene names: NA

Gene position: 1669556-1669290 (Counterclockwise)

Preceding gene: 188586212

Following gene: 188586208

Centisome position: 52.74

GC content: 34.83

Gene sequence:

>267_bases
ATGAGTAATAAGAGATATAATGAAGACTTCAAAAGAACAATTGTAGATTTATATAATTCAGGTAGTTCTGTGAAGGATTT
GTCTAGCGAATATGGTGTGACAGAGGTTACTATTTATAAATGGATCAAAGATTTCTCTCCAAACCAACAATCTGGCAGTG
AGGGAGCCACTTCAAAAGATGTGGAAGAAATGCAAAAAGAAATGGCTCGCTTGAAAGAGGAGAATGAAATCTTAAAAAAG
GCTATGACCATATTCGCCAAAAAGTAG

Upstream 100 bases:

>100_bases
CCAACTATAGTGCAGAAATATGTATGGTGTTAGTATAAATTCTTGGACACATCATGGTTAAGTCACTTACAATATTAATA
ACGAAAGGATGTGTCCAGTA

Downstream 100 bases:

>100_bases
ACAATACAGAGCTTACTGAATTTATAAAAGAACAAAAGGACGAGCATACTATCAAAGCTATTTGTGATGCTCTAGACTTT
CCGAGAAGTACTTATTACGA

Product: transposase IS3/IS911 family protein

Products: NA

Alternate protein names: Transposase IS3/IS; Transposase Family Protein; Transposase OrfA IS3 Family; Truncated Transposase

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MSNKRYNEDFKRTIVDLYNSGSSVKDLSSEYGVTEVTIYKWIKDFSPNQQSGSEGATSKDVEEMQKEMARLKEENEILKK
AMTIFAKK

Sequences:

>Translated_88_residues
MSNKRYNEDFKRTIVDLYNSGSSVKDLSSEYGVTEVTIYKWIKDFSPNQQSGSEGATSKDVEEMQKEMARLKEENEILKK
AMTIFAKK
>Mature_87_residues
SNKRYNEDFKRTIVDLYNSGSSVKDLSSEYGVTEVTIYKWIKDFSPNQQSGSEGATSKDVEEMQKEMARLKEENEILKKA
MTIFAKK

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10152; Mature: 10020

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKRYNEDFKRTIVDLYNSGSSVKDLSSEYGVTEVTIYKWIKDFSPNQQSGSEGATSKD
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHH
VEEMQKEMARLKEENEILKKAMTIFAKK
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNKRYNEDFKRTIVDLYNSGSSVKDLSSEYGVTEVTIYKWIKDFSPNQQSGSEGATSKD
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHH
VEEMQKEMARLKEENEILKKAMTIFAKK
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA