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The map label for this gene is ybgL [C]

Identifier: 188585769

GI number: 188585769

Start: 1208168

End: 1208941

Strand: Direct

Name: ybgL [C]

Synonym: Nther_1143

Alternate gene names: 188585769

Gene position: 1208168-1208941 (Clockwise)

Preceding gene: 188585768

Following gene: 188585770

Centisome position: 38.17

GC content: 39.41

Gene sequence:

>774_bases
ATGAAGGTGATTGATTTAAATTGTGATATGGGAGAAAGTTTTGGTCATTACAAAATTGGATGTGATGAAGAGGTGATTAA
CTACATTAGCTCTGCAAATATAGCATGTGGCTTTCATGCAGGGGACCCACAAGTAATGGACTATACTGTTAAATTAGCTA
GGGACAATAAGGTGGGGGTCGGAGCTCATCCTGGTTTTAATGACCTTCAGGGATTTGGAAGAAGGAAGATTCACATGACA
GGTGAAGAGATAGTAAACGAATTGATCTATCAAATTGGAGCCATTAGGAGTTTTTGTGAAGCTAATGGTGTGGGGTTGAG
TCATGTTAAACCTCATGGTGCTCTAAATAATATGGCAAGTGTAGATGAAAATTTAGCCCGGGCTGTTGCTAAGGCAATTA
AACTGACTGATCCAAATTTGATTTATATTGCATTGGCTGGCTCTAAAATGGAGCAAATCGGAAGAGAAGAAGGGTTGAAA
GTGGCTAAAGAAGCTTTTGCTGACCGACAGTATAATCCTGATGGTACCCTAGTATCGAGACAAGAAGCAGGTGCTGTATT
ACATGATAAAGAGACAATAATTGAAAGGGTTGTACAAATGGCTTCTGAGGGTGTTGTAACTGCCAAAGACGGCACAAAAT
TAAACATTAATCCTGATACTATTTGTGTTCACGGTGATAACCCTGAAGCTGTAGAATTAGCAGCAAGTATTAGACATATG
TTACAAGAACATGGTATCACAGTTAAAAGTCTTGGGACCTGGTTTACAGGCTAG

Upstream 100 bases:

>100_bases
GGATTATTTCCAGTTATAATATAATTGATATTAAAAATTAGATTATTTTAATATCTAATAATAGACTTAGCTAAATTTGT
TGCTTAAGGAGGTATGGATT

Downstream 100 bases:

>100_bases
TTCGGTATATTACCGAGCTAAACAAGAAGGGAGGACACAATATGAATTTTGTTAAACGATTAAAAAATATTGGCCCTGGT
GCTTTAGTAGCAGCAGCTTT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKVIDLNCDMGESFGHYKIGCDEEVINYISSANIACGFHAGDPQVMDYTVKLARDNKVGVGAHPGFNDLQGFGRRKIHMT
GEEIVNELIYQIGAIRSFCEANGVGLSHVKPHGALNNMASVDENLARAVAKAIKLTDPNLIYIALAGSKMEQIGREEGLK
VAKEAFADRQYNPDGTLVSRQEAGAVLHDKETIIERVVQMASEGVVTAKDGTKLNINPDTICVHGDNPEAVELAASIRHM
LQEHGITVKSLGTWFTG

Sequences:

>Translated_257_residues
MKVIDLNCDMGESFGHYKIGCDEEVINYISSANIACGFHAGDPQVMDYTVKLARDNKVGVGAHPGFNDLQGFGRRKIHMT
GEEIVNELIYQIGAIRSFCEANGVGLSHVKPHGALNNMASVDENLARAVAKAIKLTDPNLIYIALAGSKMEQIGREEGLK
VAKEAFADRQYNPDGTLVSRQEAGAVLHDKETIIERVVQMASEGVVTAKDGTKLNINPDTICVHGDNPEAVELAASIRHM
LQEHGITVKSLGTWFTG
>Mature_257_residues
MKVIDLNCDMGESFGHYKIGCDEEVINYISSANIACGFHAGDPQVMDYTVKLARDNKVGVGAHPGFNDLQGFGRRKIHMT
GEEIVNELIYQIGAIRSFCEANGVGLSHVKPHGALNNMASVDENLARAVAKAIKLTDPNLIYIALAGSKMEQIGREEGLK
VAKEAFADRQYNPDGTLVSRQEAGAVLHDKETIIERVVQMASEGVVTAKDGTKLNINPDTICVHGDNPEAVELAASIRHM
LQEHGITVKSLGTWFTG

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=249, Percent_Identity=40.9638554216867, Blast_Score=203, Evalue=7e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1143_NATTJ (B2A1I6)

Other databases:

- EMBL:   CP001034
- RefSeq:   YP_001917314.1
- ProteinModelPortal:   B2A1I6
- GeneID:   6315369
- GenomeReviews:   CP001034_GR
- KEGG:   nth:Nther_1143
- HOGENOM:   HBG482818
- OMA:   IDTVCVH
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 27830; Mature: 27830

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIDLNCDMGESFGHYKIGCDEEVINYISSANIACGFHAGDPQVMDYTVKLARDNKVGV
CEEEEECCCCCCCCCCEECCCCHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCCC
GAHPGFNDLQGFGRRKIHMTGEEIVNELIYQIGAIRSFCEANGVGLSHVKPHGALNNMAS
CCCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
VDENLARAVAKAIKLTDPNLIYIALAGSKMEQIGREEGLKVAKEAFADRQYNPDGTLVSR
HHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEH
QEAGAVLHDKETIIERVVQMASEGVVTAKDGTKLNINPDTICVHGDNPEAVELAASIRHM
HHCCCEECCHHHHHHHHHHHHHCCEEEECCCCEEECCCCEEEEECCCCHHHHHHHHHHHH
LQEHGITVKSLGTWFTG
HHHCCCEEECCCCCCCC
>Mature Secondary Structure
MKVIDLNCDMGESFGHYKIGCDEEVINYISSANIACGFHAGDPQVMDYTVKLARDNKVGV
CEEEEECCCCCCCCCCEECCCCHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCCC
GAHPGFNDLQGFGRRKIHMTGEEIVNELIYQIGAIRSFCEANGVGLSHVKPHGALNNMAS
CCCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
VDENLARAVAKAIKLTDPNLIYIALAGSKMEQIGREEGLKVAKEAFADRQYNPDGTLVSR
HHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEH
QEAGAVLHDKETIIERVVQMASEGVVTAKDGTKLNINPDTICVHGDNPEAVELAASIRHM
HHCCCEECCHHHHHHHHHHHHHCCEEEECCCCEEECCCCEEEEECCCCHHHHHHHHHHHH
LQEHGITVKSLGTWFTG
HHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA