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The map label for this gene is selD1 [H]

Identifier: 188585742

GI number: 188585742

Start: 1182763

End: 1183734

Strand: Direct

Name: selD1 [H]

Synonym: Nther_1116

Alternate gene names: 188585742

Gene position: 1182763-1183734 (Clockwise)

Preceding gene: 188585741

Following gene: 188585745

Centisome position: 37.36

GC content: 41.56

Gene sequence:

>972_bases
ATGCTCTCTTCACTAAAGGTTGAAGCTGTAGATCCGAGCTTACTAGTCGGTTTAGAAACTTCTGATGATGCTGGGGTGTA
TAGATTAACAGATGATGTTGCTCTGGTACAAACTGTAGACTTTTTTACTCCTGTAGTAGATGATCCCTTTACATTTGGTC
AGTTGGCTGCTTCTAATGCCTTGAGTGATATTTATGCCATGGGTGCGGAACCGGTTACCTGCATGAATTTATTAGGCTTC
CCCATTGATAAGTTGAGTAGTGAGATTCTTAATGAAATTTTGCGGGGTGGACATGACAAGATCCAAGAGTCAGGTGCAGC
CCTGGTAGGTGGACACTCCCTTGAAGATAATGAGCCTAAATACGGTCTGTCAGTTACAGGCACAGTAAGCCCCGATAAAG
TTTGGACAAATAGTGGTGCTCGGTCAGGAGATGTCTTGATTTTGACAAAACCTTTAGGTACAGGTATTGTGACAACAGCT
ATCAAAGGAGAACTTGCAGAGCCCCACCATGAACATTCAGTTGTTGAGGCTATGGTGACCTTAAATAAAACTGCTAAGAG
AGTCCTGGAAGATTTTAATGTAACTGCCTGTACCGATGTCACGGGTTTTGGACTCTTAGGGCATGCCCTTGAAGTAGCCA
AAGCTAGTAGTGTTGATATAGAGCTGTGGGAAGAAAATATACCTTTACTACCCGGTACTCAGGAATATGCTGAGCAAGGT
TTGATTCCGGGCGGTACTTACAAAAATCTATCATTCTTTAATGAGGTATGTTCTTTTAATGAAAGGATTTCCGAAACAAA
GAGGTTGATTTTGGCTGATGCTATCACTTCTGGAGGTTTACTTGCTTGTGTTCCGAAAGAACAGATCAACCAAGTGGAAA
ATGTTCTAAAAGAAGCAGGTTGCCTGGCTTATCATCAAGTGGGTCAGGTTAAGGATAAACAAGAAAAAGAAAGTAAAATT
TTACTGCCTTAA

Upstream 100 bases:

>100_bases
AAATGGACAAGATCATGAGTCCGAATCGAGTTGTCGCCTGACTTCTTACAGTAGTAAATCTGGTTGAGCAGCGAAACTAA
GTCCGGCGGACTTAGACAAT

Downstream 100 bases:

>100_bases
CAAAACAGTTCGGGAAAATCTGTAATTATCCCGAATATTTCGTGGCTTTTAGCCAGTTTGATTGCCTCTTCTCTGTTATT
AACAGGCCAGGGTAATACCC

Product: selenophosphate synthase

Products: NA

Alternate protein names: Selenium donor protein 1; Selenophosphate synthase 1 [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MLSSLKVEAVDPSLLVGLETSDDAGVYRLTDDVALVQTVDFFTPVVDDPFTFGQLAASNALSDIYAMGAEPVTCMNLLGF
PIDKLSSEILNEILRGGHDKIQESGAALVGGHSLEDNEPKYGLSVTGTVSPDKVWTNSGARSGDVLILTKPLGTGIVTTA
IKGELAEPHHEHSVVEAMVTLNKTAKRVLEDFNVTACTDVTGFGLLGHALEVAKASSVDIELWEENIPLLPGTQEYAEQG
LIPGGTYKNLSFFNEVCSFNERISETKRLILADAITSGGLLACVPKEQINQVENVLKEAGCLAYHQVGQVKDKQEKESKI
LLP

Sequences:

>Translated_323_residues
MLSSLKVEAVDPSLLVGLETSDDAGVYRLTDDVALVQTVDFFTPVVDDPFTFGQLAASNALSDIYAMGAEPVTCMNLLGF
PIDKLSSEILNEILRGGHDKIQESGAALVGGHSLEDNEPKYGLSVTGTVSPDKVWTNSGARSGDVLILTKPLGTGIVTTA
IKGELAEPHHEHSVVEAMVTLNKTAKRVLEDFNVTACTDVTGFGLLGHALEVAKASSVDIELWEENIPLLPGTQEYAEQG
LIPGGTYKNLSFFNEVCSFNERISETKRLILADAITSGGLLACVPKEQINQVENVLKEAGCLAYHQVGQVKDKQEKESKI
LLP
>Mature_323_residues
MLSSLKVEAVDPSLLVGLETSDDAGVYRLTDDVALVQTVDFFTPVVDDPFTFGQLAASNALSDIYAMGAEPVTCMNLLGF
PIDKLSSEILNEILRGGHDKIQESGAALVGGHSLEDNEPKYGLSVTGTVSPDKVWTNSGARSGDVLILTKPLGTGIVTTA
IKGELAEPHHEHSVVEAMVTLNKTAKRVLEDFNVTACTDVTGFGLLGHALEVAKASSVDIELWEENIPLLPGTQEYAEQG
LIPGGTYKNLSFFNEVCSFNERISETKRLILADAITSGGLLACVPKEQINQVENVLKEAGCLAYHQVGQVKDKQEKESKI
LLP

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=300, Percent_Identity=31.6666666666667, Blast_Score=128, Evalue=9e-30,
Organism=Homo sapiens, GI15011844, Length=332, Percent_Identity=29.5180722891566, Blast_Score=124, Evalue=1e-28,
Organism=Escherichia coli, GI1788062, Length=300, Percent_Identity=45, Blast_Score=251, Evalue=4e-68,
Organism=Caenorhabditis elegans, GI17543426, Length=229, Percent_Identity=32.7510917030568, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24653602, Length=309, Percent_Identity=30.42071197411, Blast_Score=130, Evalue=8e-31,
Organism=Drosophila melanogaster, GI24653604, Length=309, Percent_Identity=30.42071197411, Blast_Score=130, Evalue=8e-31,
Organism=Drosophila melanogaster, GI28574119, Length=313, Percent_Identity=25.2396166134185, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28574118, Length=206, Percent_Identity=28.6407766990291, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 34596; Mature: 34596

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSLKVEAVDPSLLVGLETSDDAGVYRLTDDVALVQTVDFFTPVVDDPFTFGQLAASNA
CCCCCEEEECCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LSDIYAMGAEPVTCMNLLGFPIDKLSSEILNEILRGGHDKIQESGAALVGGHSLEDNEPK
HHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCCEEECCCCCCCCCCC
YGLSVTGTVSPDKVWTNSGARSGDVLILTKPLGTGIVTTAIKGELAEPHHEHSVVEAMVT
CCEEEEECCCCCCEECCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH
LNKTAKRVLEDFNVTACTDVTGFGLLGHALEVAKASSVDIELWEENIPLLPGTQEYAEQG
HHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCC
LIPGGTYKNLSFFNEVCSFNERISETKRLILADAITSGGLLACVPKEQINQVENVLKEAG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHC
CLAYHQVGQVKDKQEKESKILLP
HHHHHHHHCCCCHHHHCCCCCCC
>Mature Secondary Structure
MLSSLKVEAVDPSLLVGLETSDDAGVYRLTDDVALVQTVDFFTPVVDDPFTFGQLAASNA
CCCCCEEEECCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LSDIYAMGAEPVTCMNLLGFPIDKLSSEILNEILRGGHDKIQESGAALVGGHSLEDNEPK
HHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCCEEECCCCCCCCCCC
YGLSVTGTVSPDKVWTNSGARSGDVLILTKPLGTGIVTTAIKGELAEPHHEHSVVEAMVT
CCEEEEECCCCCCEECCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH
LNKTAKRVLEDFNVTACTDVTGFGLLGHALEVAKASSVDIELWEENIPLLPGTQEYAEQG
HHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCC
LIPGGTYKNLSFFNEVCSFNERISETKRLILADAITSGGLLACVPKEQINQVENVLKEAG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHC
CLAYHQVGQVKDKQEKESKILLP
HHHHHHHHCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11041351 [H]