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The map label for this gene is ytcJ [H]

Identifier: 188585695

GI number: 188585695

Start: 1125461

End: 1127152

Strand: Direct

Name: ytcJ [H]

Synonym: Nther_1068

Alternate gene names: 188585695

Gene position: 1125461-1127152 (Clockwise)

Preceding gene: 188585694

Following gene: 188585696

Centisome position: 35.55

GC content: 38.36

Gene sequence:

>1692_bases
ATGTCTTCAGATCAAATTTTTAAGGGTGTAGTTTCTACTGCCATTGCGTTGGTGATGGTGTTCAGTGTTAGTGTTGGTAC
AATGCAGGCAAGGTCTGATGAAACAGCGGATTTGATTCTTAAGAATGGAGAAATTTACACAGTAGATGAAAACAATTCGG
TGGTAGAAGCTGTTGCAGTTAATGATGATACAATTATAGAAACAGGAAGTTATGATGATGTAGATCAATTTATGGGTCAA
AAAACTGAAGTGATTGATTTGGAAGGAAGGGCAGTTACTCCAGGTTTAGCAGATGGTCATATGCATCTTTATAGTATGGC
AACAATAGCTTTAGGGGTTGATGTTTATTGGTTAGAAAAATCAGAGTTATTAGAAAATGTAGAAGAGGAAGTAGAACAAA
CAGAACCAGGGGAATGGGTACTAGGACGTGGTTATAATGAAGCCCTATGGGACGATGCAGAACCTCATCGAGAAGTCCTT
GATGAAATCAGTACTGAGCATCCTATAGCTCTTACGAGGTATTGTGGCCATCAGTTGTGGGTGAACAGTAAAGCATTGGA
ATTGTCTGGTATAGATGCTGAAACTGAAGTGGAAGATGGTACTTTAATACGTGATGACGATGGCGAACCCACAGGATTGT
TATTAGGGGCAGCTATGGGAGAAATAGATAGACCAGGTTATGAAGAAGAGGAGATTATGCAAGGTATTGCAGAAGTAACA
GAATTGGCTGCTAGCTATGGTTTGACTTATTTACATGATGCTTCAGCACATTCCTTAGACCGCATTGATAATATGAAAGA
ACTTTATGAGAACGGAAAAATAGATATCAGAGTCAATGATATGGCTAGTTATGATGCAGCCATGGAGATGGGAACACCAG
AAAAAGGGTTATATAACAATAAATACAGTATTCAATCTGTAAAATTTCAGATTGATGGATCTCTTGGAGCAAGAAGTGCA
GCTTTTAAAGAGGATTACAGTGATGACCCGGGCAATGACGGCTTAACATATTATGAAGAAGATGAGTTAACCGAAAAAGT
AGCAGACTTATATGAAATTGAATTTCAACCACGAACTCATGCAATTGGAGATTATGGCAATCATAAAACATTAAATGTTT
ATGAAAGAGCCCTTGAACAAGTTAACAACGATTTTGTTGATGATCACAGATCAGCTATTGAACATTCTCAGATAATAGAT
TTTAAAGATATTCCCAGGTTTGCTAAACTGGACATTATTGCTTCCTGGAATCAGATTCACGCTACAGAGGATATGCTATT
TGCTGAAGATCGTGTAGGAGAAGAGAGAATTCTTGGCGCTTATGCATGGCAAACTATGGAAAGCTTGGGTGTTGTTGGAC
TTGGTGGTTCTGATGCAGCTGTTTCACCACTGAATCCTTTTTATGGAATTCATGCAGCTGTAACCCGTCAAGATCGTGAT
AACAATCCAGAAGATGGGTGGTACGGTGATCAGGCACTAACCAGAGAGCAGGCTTTAAGACAATATACTTACAATAATGC
TTATGCCGCATTTCAAGAAGACTTACTAGGATCAATTGAACCAGGGAAGCTTGCAGATTTTACTGTTCTTGATCAAAATA
TAATGGATGAAGAAGAGGTTCCTGATGAGAAGATATGGAAAACAGAACCCATTAAAACTATAGTAGGAGGAGAAATAGTA
TACGAACAATAA

Upstream 100 bases:

>100_bases
TTACGGAAAAGTGTAAATTGCAAGATAACAGAGTTTAGATCTGCTAGTTCTTTTTACTGGCAGATTTAATAGTAATTTAA
ACTAAGGAGGTTTTATTTAA

Downstream 100 bases:

>100_bases
TCAAAAGATGTAGGATATAATTGTAAACATTTATCGTAAATAATACAAATTGGGCTGCCTTTTTAAGATAAAGAGAATTA
AAAAAGCCGCTGATACAGAA

Product: Amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 562

Protein sequence:

>563_residues
MSSDQIFKGVVSTAIALVMVFSVSVGTMQARSDETADLILKNGEIYTVDENNSVVEAVAVNDDTIIETGSYDDVDQFMGQ
KTEVIDLEGRAVTPGLADGHMHLYSMATIALGVDVYWLEKSELLENVEEEVEQTEPGEWVLGRGYNEALWDDAEPHREVL
DEISTEHPIALTRYCGHQLWVNSKALELSGIDAETEVEDGTLIRDDDGEPTGLLLGAAMGEIDRPGYEEEEIMQGIAEVT
ELAASYGLTYLHDASAHSLDRIDNMKELYENGKIDIRVNDMASYDAAMEMGTPEKGLYNNKYSIQSVKFQIDGSLGARSA
AFKEDYSDDPGNDGLTYYEEDELTEKVADLYEIEFQPRTHAIGDYGNHKTLNVYERALEQVNNDFVDDHRSAIEHSQIID
FKDIPRFAKLDIIASWNQIHATEDMLFAEDRVGEERILGAYAWQTMESLGVVGLGGSDAAVSPLNPFYGIHAAVTRQDRD
NNPEDGWYGDQALTREQALRQYTYNNAYAAFQEDLLGSIEPGKLADFTVLDQNIMDEEEVPDEKIWKTEPIKTIVGGEIV
YEQ

Sequences:

>Translated_563_residues
MSSDQIFKGVVSTAIALVMVFSVSVGTMQARSDETADLILKNGEIYTVDENNSVVEAVAVNDDTIIETGSYDDVDQFMGQ
KTEVIDLEGRAVTPGLADGHMHLYSMATIALGVDVYWLEKSELLENVEEEVEQTEPGEWVLGRGYNEALWDDAEPHREVL
DEISTEHPIALTRYCGHQLWVNSKALELSGIDAETEVEDGTLIRDDDGEPTGLLLGAAMGEIDRPGYEEEEIMQGIAEVT
ELAASYGLTYLHDASAHSLDRIDNMKELYENGKIDIRVNDMASYDAAMEMGTPEKGLYNNKYSIQSVKFQIDGSLGARSA
AFKEDYSDDPGNDGLTYYEEDELTEKVADLYEIEFQPRTHAIGDYGNHKTLNVYERALEQVNNDFVDDHRSAIEHSQIID
FKDIPRFAKLDIIASWNQIHATEDMLFAEDRVGEERILGAYAWQTMESLGVVGLGGSDAAVSPLNPFYGIHAAVTRQDRD
NNPEDGWYGDQALTREQALRQYTYNNAYAAFQEDLLGSIEPGKLADFTVLDQNIMDEEEVPDEKIWKTEPIKTIVGGEIV
YEQ
>Mature_562_residues
SSDQIFKGVVSTAIALVMVFSVSVGTMQARSDETADLILKNGEIYTVDENNSVVEAVAVNDDTIIETGSYDDVDQFMGQK
TEVIDLEGRAVTPGLADGHMHLYSMATIALGVDVYWLEKSELLENVEEEVEQTEPGEWVLGRGYNEALWDDAEPHREVLD
EISTEHPIALTRYCGHQLWVNSKALELSGIDAETEVEDGTLIRDDDGEPTGLLLGAAMGEIDRPGYEEEEIMQGIAEVTE
LAASYGLTYLHDASAHSLDRIDNMKELYENGKIDIRVNDMASYDAAMEMGTPEKGLYNNKYSIQSVKFQIDGSLGARSAA
FKEDYSDDPGNDGLTYYEEDELTEKVADLYEIEFQPRTHAIGDYGNHKTLNVYERALEQVNNDFVDDHRSAIEHSQIIDF
KDIPRFAKLDIIASWNQIHATEDMLFAEDRVGEERILGAYAWQTMESLGVVGLGGSDAAVSPLNPFYGIHAAVTRQDRDN
NPEDGWYGDQALTREQALRQYTYNNAYAAFQEDLLGSIEPGKLADFTVLDQNIMDEEEVPDEKIWKTEPIKTIVGGEIVY
EQ

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 62821; Mature: 62690

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDQIFKGVVSTAIALVMVFSVSVGTMQARSDETADLILKNGEIYTVDENNSVVEAVAV
CCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEEEECCEEEEECCCCCEEEEEEE
NDDTIIETGSYDDVDQFMGQKTEVIDLEGRAVTPGLADGHMHLYSMATIALGVDVYWLEK
CCCCEEECCCCCCHHHHCCCCCEEEEECCCEECCCCCCCCHHHHHHHHHHHCCEEEEECH
SELLENVEEEVEQTEPGEWVLGRGYNEALWDDAEPHREVLDEISTEHPIALTRYCGHQLW
HHHHHHHHHHHHHCCCCCEEEECCCCHHHCCCCCHHHHHHHHHCCCCCEEHHHHCCCCEE
VNSKALELSGIDAETEVEDGTLIRDDDGEPTGLLLGAAMGEIDRPGYEEEEIMQGIAEVT
ECCCEEEEECCCCCCCCCCCCEEECCCCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHH
ELAASYGLTYLHDASAHSLDRIDNMKELYENGKIDIRVNDMASYDAAMEMGTPEKGLYNN
HHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCCCCCCC
KYSIQSVKFQIDGSLGARSAAFKEDYSDDPGNDGLTYYEEDELTEKVADLYEIEFQPRTH
CEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCEECHHHHHHHHHHHHEEECCCCCC
AIGDYGNHKTLNVYERALEQVNNDFVDDHRSAIEHSQIIDFKDIPRFAKLDIIASWNQIH
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCHHEEEEEECCCHHH
ATEDMLFAEDRVGEERILGAYAWQTMESLGVVGLGGSDAAVSPLNPFYGIHAAVTRQDRD
CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHEEEECCCC
NNPEDGWYGDQALTREQALRQYTYNNAYAAFQEDLLGSIEPGKLADFTVLDQNIMDEEEV
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHCC
PDEKIWKTEPIKTIVGGEIVYEQ
CCHHCCCCCCCHHHHCCEEEECC
>Mature Secondary Structure 
SSDQIFKGVVSTAIALVMVFSVSVGTMQARSDETADLILKNGEIYTVDENNSVVEAVAV
CCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEEEECCEEEEECCCCCEEEEEEE
NDDTIIETGSYDDVDQFMGQKTEVIDLEGRAVTPGLADGHMHLYSMATIALGVDVYWLEK
CCCCEEECCCCCCHHHHCCCCCEEEEECCCEECCCCCCCCHHHHHHHHHHHCCEEEEECH
SELLENVEEEVEQTEPGEWVLGRGYNEALWDDAEPHREVLDEISTEHPIALTRYCGHQLW
HHHHHHHHHHHHHCCCCCEEEECCCCHHHCCCCCHHHHHHHHHCCCCCEEHHHHCCCCEE
VNSKALELSGIDAETEVEDGTLIRDDDGEPTGLLLGAAMGEIDRPGYEEEEIMQGIAEVT
ECCCEEEEECCCCCCCCCCCCEEECCCCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHH
ELAASYGLTYLHDASAHSLDRIDNMKELYENGKIDIRVNDMASYDAAMEMGTPEKGLYNN
HHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCCCCCCC
KYSIQSVKFQIDGSLGARSAAFKEDYSDDPGNDGLTYYEEDELTEKVADLYEIEFQPRTH
CEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCEECHHHHHHHHHHHHEEECCCCCC
AIGDYGNHKTLNVYERALEQVNNDFVDDHRSAIEHSQIIDFKDIPRFAKLDIIASWNQIH
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCHHEEEEEECCCHHH
ATEDMLFAEDRVGEERILGAYAWQTMESLGVVGLGGSDAAVSPLNPFYGIHAAVTRQDRD
CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHEEEECCCC
NNPEDGWYGDQALTREQALRQYTYNNAYAAFQEDLLGSIEPGKLADFTVLDQNIMDEEEV
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHCC
PDEKIWKTEPIKTIVGGEIVYEQ
CCHHCCCCCCCHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]