| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585669
Identifier: 188585669
GI number: 188585669
Start: 1105495
End: 1106082
Strand: Direct
Name: 188585669
Synonym: Nther_1042
Alternate gene names: NA
Gene position: 1105495-1106082 (Clockwise)
Preceding gene: 188585668
Following gene: 188585670
Centisome position: 34.92
GC content: 29.08
Gene sequence:
>588_bases ATGGGTAAACAGGAAGAAATCAAATTCTTTAATGATCAAGCAAAAGTGTGGGATAACAAGATTACGCAAGAACATATAAA AGTAGCTAAAGATTTTATTTCAGAATATAATATTGGGGCTAATAATGCGGTTCTTGATGTAGGTGCTGGAACAGGAATAA TTTACACTATCATTGATAATAAAAACTTAACCGACTACGTTGGAATTGATATTGCTGAAAATATGGTTAAAGAATTTAGA AAAAAACACCCAGAAGCTGATATTAGGTGTGATGATTTTGAACTGGAATGTCAGTTAGAGAAAGCATTTGATTTTGTTAT AATTTTTGATGGTATACCTCACTTCAGAAATTTAAGCAAGTTGTTTGAAAATGCATATAACAACTTGAATAAAAATGGGA AGTTTATAATCGTACATTCCAAAACTAGGAAAGAATTTAAAGCAAATCAAGAGAAAAACGGATATAATTCTGAAAAATCA CTTATACCAACTGATGCCGAACTAATCTATCATAGTAAAGAAAAAAGTTTTACAAATATAATTGTCGAAGATGATAGATA CTTTAAGTTTGTATGTGAAAAAAACTGA
Upstream 100 bases:
>100_bases AGGGGCAACCTCCGCGCCAGGCCGACTGAGTCGGCCCGGGTATGTTGCAAACAACGGGAACGTTAGGCGACATATAACTC AATAAGGAGGGAGGATAGCT
Downstream 100 bases:
>100_bases GAGATTTGGCGAAACAAAATACTCTATTGTTGATGTTGTTAAGGTCGTAAGGGAAGAAACTCATAAAAATAACAATAAAG AATAGTTAATGAAGAGGGAG
Product: Methyltransferase type 11
Products: NA
Alternate protein names: Methyltransferase With A HTH Motif; SAM-Dependent Methyltransferase; Methyltransferase Family Protein; Methlytransferase
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MGKQEEIKFFNDQAKVWDNKITQEHIKVAKDFISEYNIGANNAVLDVGAGTGIIYTIIDNKNLTDYVGIDIAENMVKEFR KKHPEADIRCDDFELECQLEKAFDFVIIFDGIPHFRNLSKLFENAYNNLNKNGKFIIVHSKTRKEFKANQEKNGYNSEKS LIPTDAELIYHSKEKSFTNIIVEDDRYFKFVCEKN
Sequences:
>Translated_195_residues MGKQEEIKFFNDQAKVWDNKITQEHIKVAKDFISEYNIGANNAVLDVGAGTGIIYTIIDNKNLTDYVGIDIAENMVKEFR KKHPEADIRCDDFELECQLEKAFDFVIIFDGIPHFRNLSKLFENAYNNLNKNGKFIIVHSKTRKEFKANQEKNGYNSEKS LIPTDAELIYHSKEKSFTNIIVEDDRYFKFVCEKN >Mature_194_residues GKQEEIKFFNDQAKVWDNKITQEHIKVAKDFISEYNIGANNAVLDVGAGTGIIYTIIDNKNLTDYVGIDIAENMVKEFRK KHPEADIRCDDFELECQLEKAFDFVIIFDGIPHFRNLSKLFENAYNNLNKNGKFIIVHSKTRKEFKANQEKNGYNSEKSL IPTDAELIYHSKEKSFTNIIVEDDRYFKFVCEKN
Specific function: Unknown
COG id: COG4976
COG function: function code R; Predicted methyltransferase (contains TPR repeat)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22690; Mature: 22559
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKQEEIKFFNDQAKVWDNKITQEHIKVAKDFISEYNIGANNAVLDVGAGTGIIYTIIDN CCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECC KNLTDYVGIDIAENMVKEFRKKHPEADIRCDDFELECQLEKAFDFVIIFDGIPHFRNLSK CCCCHHHCCHHHHHHHHHHHHHCCCCCCEECCCEEEEEEECCEEEEEEECCCCCHHHHHH LFENAYNNLNKNGKFIIVHSKTRKEFKANQEKNGYNSEKSLIPTDAELIYHSKEKSFTNI HHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEE IVEDDRYFKFVCEKN EEECCCEEEEEEECC >Mature Secondary Structure GKQEEIKFFNDQAKVWDNKITQEHIKVAKDFISEYNIGANNAVLDVGAGTGIIYTIIDN CCCCCHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECC KNLTDYVGIDIAENMVKEFRKKHPEADIRCDDFELECQLEKAFDFVIIFDGIPHFRNLSK CCCCHHHCCHHHHHHHHHHHHHCCCCCCEECCCEEEEEEECCEEEEEEECCCCCHHHHHH LFENAYNNLNKNGKFIIVHSKTRKEFKANQEKNGYNSEKSLIPTDAELIYHSKEKSFTNI HHHHHHHCCCCCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEE IVEDDRYFKFVCEKN EEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA