Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
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Accession | NC_010718 |
Length | 3,165,557 |
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The map label for this gene is 188585458
Identifier: 188585458
GI number: 188585458
Start: 867500
End: 867844
Strand: Reverse
Name: 188585458
Synonym: Nther_0830
Alternate gene names: NA
Gene position: 867844-867500 (Counterclockwise)
Preceding gene: 188585459
Following gene: 188585457
Centisome position: 27.42
GC content: 30.14
Gene sequence:
>345_bases ATGACGGATAATTATGTTATTTTAATCACTTCTGATAGTTTTGGAAAAGGCGATAAAACTTTAGGTAAAAAATTAATGGA TAGTTATCTTTATACACTGACAGAAGCAGATCAACTACCTACACATATATTATTTCTAAATTCAGGTGTAAATCTCGTGA CAAATGACTCTAATTCCTTAGACAATTTAAAAGCTTTAGAAGATAAAAGAGTTACGTTAATGGCTTGTGGAATATGTGTA GAATACTTTTCCCTTGAAGAAAAAGTTGCAGTTGGAAATATTGGGAATATGTATTCAAATATGGAACTTATGAGCGAAGC TGATAAAGTGATAACGATTTGCTAA
Upstream 100 bases:
>100_bases AAGATCATTTAAAACAATGTATATATTTCACCGGTCAAGTTGCTGAAAAAACGATAGAGCTTATTTTTAAATATCACCAA TAATAAGGGTGGTGTAATAT
Downstream 100 bases:
>100_bases TCTTGGAGGAATTGATATGTATAGTGTTGGCATAGATATTGGTTCAGTTACCACAAAAGGAGTTTTGTTTGATGGCTCTA ACTACTTGTCTTTGTATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: SirA Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; SirA-Like Protein; Cytoplasmic Protein; Transcriptional Regulator; Redox Protein; Selenium Metabolism Protein Yedf; SirA-Like
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MTDNYVILITSDSFGKGDKTLGKKLMDSYLYTLTEADQLPTHILFLNSGVNLVTNDSNSLDNLKALEDKRVTLMACGICV EYFSLEEKVAVGNIGNMYSNMELMSEADKVITIC
Sequences:
>Translated_114_residues MTDNYVILITSDSFGKGDKTLGKKLMDSYLYTLTEADQLPTHILFLNSGVNLVTNDSNSLDNLKALEDKRVTLMACGICV EYFSLEEKVAVGNIGNMYSNMELMSEADKVITIC >Mature_113_residues TDNYVILITSDSFGKGDKTLGKKLMDSYLYTLTEADQLPTHILFLNSGVNLVTNDSNSLDNLKALEDKRVTLMACGICVE YFSLEEKVAVGNIGNMYSNMELMSEADKVITIC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12614; Mature: 12482
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNYVILITSDSFGKGDKTLGKKLMDSYLYTLTEADQLPTHILFLNSGVNLVTNDSNSL CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCC DNLKALEDKRVTLMACGICVEYFSLEEKVAVGNIGNMYSNMELMSEADKVITIC HHHHHHCCCCEEEEHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCEEEEEC >Mature Secondary Structure TDNYVILITSDSFGKGDKTLGKKLMDSYLYTLTEADQLPTHILFLNSGVNLVTNDSNSL CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCC DNLKALEDKRVTLMACGICVEYFSLEEKVAVGNIGNMYSNMELMSEADKVITIC HHHHHHCCCCEEEEHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA